PFAM Domains • Capnodiales
Annotations/GenomesPieho1_1Polci1TotalAnnotation Description
PFAMs
5,4907,81013,300
363874ATPase family associated with various cellular activities (AAA)
254671ABC transporter
448ATP synthase alpha/beta family, nucleotide-binding domain
161430Elongation factor Tu GTP binding domain
8917Helix-loop-helix DNA-binding domain
325Hsp20/alpha crystallin family
7815Hsp70 protein
8816KH domain
112SH2 domain
222244SH3 domain
10919Actin
166581Ankyrin repeat
123PAN domain
7714ADP-ribosylation factor family
171128Eukaryotic aspartyl protease
448Cyclic nucleotide-binding domain
112Cytochrome c
123Double-stranded RNA binding motif
191837EF hand
1234Fe-4S binding domain
213Fibronectin type III domain
11Globin
41115Glutathione S-transferase, C-terminal domain
123Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
459Homeodomain
224lactate/malate dehydrogenase, NAD binding domain
5510Myosin head (motor domain)
205575Cytochrome P450
95104199Protein kinase domain
91726Pyridine nucleotide-disulphide oxidoreductase
232346Ras family
102131Response regulator receiver domain
224RNase H
5657113RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
123Copper/zinc superoxide dismutase (SODC)
123Iron/manganese superoxide dismutases, alpha-hairpin domain
2810Subtilase family
195877Sugar (and other) transporter
81018Thioredoxin
112Trypsin
336Tubulin/FtsZ family, GTPase domain
235von Willebrand factor type A domain
405494Zinc finger, C2H2 type
354075Zinc finger, C3HC4 type (RING finger)
10414Zinc knuckle
224Protein-tyrosine phosphatase
36120156short chain dehydrogenase
145064Zinc-binding dehydrogenase
5510Thiolase, N-terminal domain
41115Beta-ketoacyl synthase, N-terminal domain
3582Fe-2S iron-sulfur cluster binding domain
112Enolase, C-terminal TIM barrel domain
8816Glutamine amidotransferase class-I
101020TCP-1/cpn60 chaperonin family
246Glutamine synthetase, catalytic domain
224Triosephosphate isomerase
101121E1-E2 ATPase
10818Core histone H2A/H2B/H3/H4
61218Alpha amylase, catalytic domain
224Phorbol esters/diacylglycerol binding domain (C1 domain)
7815Bacterial transferase hexapeptide (six repeats)
347tRNA synthetases class I (I, L, M and V)
9716Cyclin, N-terminal domain
21315Carboxylesterase family
448DNA polymerase family B
448ATP synthase subunit C
336Peroxidase
99Beta-lactamase
246C-5 cytosine-specific DNA methylase
192645Calcineurin-like phosphoesterase
448Cellulase (glycosyl hydrolase family 5)
7815tRNA synthetases class II (D, K and N)
363874Mitochondrial carrier protein
121830Aminotransferase class I and II
7916Phosphoribosyl transferase domain
111223Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
112Phosphoglycerate kinase
213Ribosomal protein S4/S9 N-terminal domain
224Ribosomal protein S12/S23
11Bacterial regulatory helix-turn-helix proteins, AraC family
112Chaperonin 10 Kd subunit
111324C2 domain
181937PH domain
4812bZIP transcription factor
91625Aldehyde dehydrogenase family
37180217Fungal Zn(2)-Cys(6) binuclear cluster domain
172340Cytochrome b5-like Heme/Steroid binding domain
33Oxidoreductase molybdopterin binding domain
81624Oxidoreductase NAD-binding domain
222446SNF2 family N-terminal domain
224Ribosomal protein S7p/S5e
212142Ubiquitin-conjugating enzyme
5813Isocitrate/isopropylmalate dehydrogenase
224Ribosomal Proteins L2, RNA binding domain
112Hsp90 protein
224Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
112Dihydrofolate reductase
145Chitin recognition protein
426Cysteine-rich secretory protein family
112Ribosomal protein S3, C-terminal domain
66Cupin
123Annexin
3362-oxoacid dehydrogenases acyltransferase (catalytic domain)
145Catalase
112Disintegrin
5914Aminotransferase class-III
325Ribosomal protein S19
112DNA gyrase B
5611Thiamine pyrophosphate enzyme, central domain
358Lyase
224Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11Sodium:neurotransmitter symporter family
112Adenylate and Guanylate cyclase catalytic domain
112ATP synthase delta (OSCP) subunit
112Orotidine 5'-phosphate decarboxylase / HUMPS family
213Indole-3-glycerol phosphate synthase
11Aromatic amino acid lyase
112Pyruvate kinase, barrel domain
101020Kinesin motor domain
252853DnaJ domain
141428Proteasome subunit
99Major intrinsic protein
112ATP synthase
22Glycosyl hydrolase family 1
1123'5'-cyclic nucleotide phosphodiesterase
112Profilin
112Ribosomal protein L22p/L17e
224Ribosomal protein L14p/L23e
91019Ubiquitin family
437Cofilin/tropomyosin-type actin-binding protein
22414-3-3 protein
246Alkaline phosphatase
112Zinc carboxypeptidase
113344Aldo/keto reductase family
101525Myb-like DNA-binding domain
448Forkhead domain
279Glycosyl hydrolases family 32 N-terminal domain
112Ribosomal protein L16p/L10e
224Ribosomal protein S14p/S29e
347FKBP-type peptidyl-prolyl cis-trans isomerase
112Glutathione peroxidase
224
6915Flavodoxin
112Calreticulin family
358Common central domain of tyrosinase
5813Aminotransferase class-V
112Ribonucleotide reductase, small chain
373875DEAD/DEAH box helicase
6371134Helicase conserved C-terminal domain
123EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
123Ribosomal protein L23
112Pyridoxal-dependent decarboxylase, C-terminal sheet domain
224Ribosomal protein L5
5510Pyridoxal-dependent decarboxylase conserved domain
224Citrate synthase, C-terminal domain
5510GHMP kinases N terminal domain
4711Biotin carboxylase, N-terminal domain
112Tryptophan synthase alpha chain
81119Pyridoxal-phosphate dependent enzyme
101626NUDIX domain
5510pfkB family carbohydrate kinase
11Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
224Ribosomal protein L3
224Ribosomal protein L11, RNA binding domain
81523Histidine phosphatase superfamily (branch 1)
112Thymidylate synthase
448ATP synthase alpha/beta chain, C terminal domain
549Calponin homology (CH) domain
6814Glutamine amidotransferases class-II
224Ribosomal protein S15
112Thaumatin family
112Fructose-1-6-bisphosphatase, N-terminal domain
112Ribonucleotide reductase, all-alpha domain
224Ribosomal protein S2
224SRF-type transcription factor (DNA-binding and dimerisation domain)
5813GATA zinc finger
185876Amino acid permease
246Prolyl oligopeptidase family
123Ribosomal protein L30p/L7e
51015Histidine phosphatase superfamily (branch 2)
112Respiratory-chain NADH dehydrogenase, 30 Kd subunit
448Aconitase family (aconitate hydratase)
448Glycosyl hydrolases family 17
224Ribosomal protein S5, N-terminal domain
112Nucleoside diphosphate kinase
112Ribosomal protein S10p/S20e
33Arrestin (or S-antigen), N-terminal domain
112Phosphoglucose isomerase
112Carbohydrate phosphorylase
112SecY translocase
112Respiratory-chain NADH dehydrogenase, 49 Kd subunit
123Ribosomal protein L6
336Polyprenyl synthetase
235Hexokinase
6814Dynamin family
718Transcription factor TFIID (or TATA-binding protein, TBP)
257Rieske [2Fe-2S] domain
11Phytochrome region
7815Biotin-requiring enzyme
112Phosphofructokinase
224Ribosomal protein S17
112Hydroxymethylglutaryl-coenzyme A reductase
347FGGY family of carbohydrate kinases, N-terminal domain
11Sodium:dicarboxylate symporter family
5914Enoyl-CoA hydratase/isomerase
224Ribosomal protein S9/S16
426Transcription factor TFIIB repeat
5712Cytidine and deoxycytidylate deaminase zinc-binding region
112Molybdopterin oxidoreductase
257Chromo (CHRromatin Organisation MOdifier) domain
235Phosphatidylinositol-specific phospholipase C, Y domain
448Phosphatidylinositol-specific phospholipase C, X domain
3912D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
112Malic enzyme, N-terminal domain
1236-phosphogluconate dehydrogenase, C-terminal domain
91322Multicopper oxidase
6713WW domain
112Ribosomal RNA adenine dimethylase
145Yeast PIR protein repeat
142109251WD domain, G-beta repeat
347Heavy-metal-associated domain
336Adenylate kinase
224Phosphoglucomutase/phosphomannomutase, C-terminal domain
213Ribosomal protein S8
213Ribosomal protein S11
448LIM domain
224Regulator of chromosome condensation (RCC1) repeat
224Ribosomal protein S13/S18
224chorismate binding enzyme
33660s Acidic ribosomal protein
448Prenyltransferase and squalene oxidase repeat
5712Protein kinase C terminal domain
112Single-strand binding protein family
112S-adenosylmethionine synthetase, N-terminal domain
7815Bromodomain
5813Acyl-CoA dehydrogenase, C-terminal domain
131730Ubiquitin carboxyl-terminal hydrolase
112Ribosomal protein L36
22Ribonuclease T2 family
336HSF-type DNA-binding
224SRP54-type protein, GTPase domain
11Urease alpha-subunit, N-terminal domain
81220Serine carboxypeptidase
7815Phosphatidylinositol 3- and 4-kinase
123Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
145Inositol monophosphatase family
549Glutaredoxin
235Isocitrate lyase family
224Serine hydroxymethyltransferase
246Iron-containing alcohol dehydrogenase
213Ribosomal protein L10
347KOW motif
112Ribosomal protein L34
224RF-1 domain
22Sodium:solute symporter family
112Imidazoleglycerol-phosphate dehydratase
112DNA polymerase family A
112IMP dehydrogenase / GMP reductase domain
112Glucose-6-phosphate dehydrogenase, NAD binding domain
4610Protein phosphatase 2C
224Nucleotidyl transferase
123Carbonic anhydrase
112Phosphoribulokinase / Uridine kinase family
11Transcriptional regulatory protein, C terminal
549Fatty acid desaturase
6612MutS domain V
123Delta-aminolevulinic acid dehydratase
246Arginase family
6612MCM P-loop domain
224Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 3
7815FHA domain
174259AMP-binding enzyme
437G-protein alpha subunit
7815HMG (high mobility group) box
61622His Kinase A (phospho-acceptor) domain
224Armadillo/beta-catenin-like repeat
222345Tetratricopeptide repeat
11Retroviral envelope protein
235Ion transport protein
112DNA gyrase/topoisomerase IV, subunit A
101323BRCA1 C Terminus (BRCT) domain
5611Glycosyl transferases group 1
448Glycosyl transferase family 2
112SAM domain (Sterile alpha motif)
112linker histone H1 and H5 family
112Ribosomal protein L7/L12 C-terminal domain
33ribonuclease
11Urease, gamma subunit
448CoA-ligase
72330Phosphopantetheine attachment site
235Formyl transferase
8917Metallopeptidase family M24
151530Leucine Rich Repeat
153752alpha/beta hydrolase fold
336RNA polymerase Rpb2, domain 6
538PB1 domain
325Staphylococcal nuclease homologue
121123Rab-GTPase-TBC domain
112Tudor domain
112WH1 domain
235Zinc finger, ZZ type
112HRDC domain
111122CBS domain
123Ribosomal protein L13
224Ribosomal protein L4/L1 family
112Clp protease
448S1 RNA binding domain
11HIUase/Transthyretin family
358AhpC/TSA family
347tRNA synthetases class I (W and Y)
112UvrD/REP helicase N-terminal domain
6612Rhodanese-like domain
224Universal stress protein family
204060Acetyltransferase (GNAT) family
112SecE/Sec61-gamma subunits of protein translocation complex
112C-terminal regulatory domain of Threonine dehydratase
224AIR synthase related protein, N-terminal domain
7714tRNA synthetase class II core domain (G, H, P, S and T)
224SpoU rRNA Methylase family
224Tetrapyrrole (Corrin/Porphyrin) Methylases
112Glycosyl transferase family, a/b domain
112PDZ domain
279Class II Aldolase and Adducin N-terminal domain
336Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
5510Fes/CIP4, and EFC/F-BAR homology domain
448IQ calmodulin-binding motif
224Phosphoinositide 3-kinase family, accessory domain (PIK domain)
459Phospholipase D Active site motif
112Regulator of G protein signaling domain
235GTPase-activator protein for Ras-like GTPase
448RasGEF domain
437RasGEF N-terminal motif
9817RhoGAP domain
6511RhoGEF domain
347SPRY domain
336RNA polymerase Rpb1, domain 2
112Guanylate kinase
347Gelsolin repeat
81119UBA/TS-N domain
151732PHD-finger
112GGL domain
7613HECT-domain (ubiquitin-transferase)
33Helix-hairpin-helix motif
112MSP (Major sperm protein) domain
5510Ribonuclease III domain
224Region in Clathrin and VPS
123RanBP1 domain
224PPIC-type PPIASE domain
224Zn-finger in Ran binding protein and others
111829Zinc finger C-x8-C-x5-C-x3-H type (and similar)
112Poly(ADP-ribose) polymerase catalytic domain
112Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
265076F-box domain
112Elongation factor 1 gamma, conserved domain
123Calpain family cysteine protease
123Copper fist DNA binding domain
448CRAL/TRIO domain
71017BTB/POZ domain
112Inhibitor of Apoptosis domain
347Voltage gated chloride channel
134Caspase domain
538GDSL-like Lipase/Acylhydrolase
112Poly-adenylate binding protein, unique domain
92534ABC transporter transmembrane region
5712FAD binding domain
21113Condensation domain
112S-adenosyl-L-homocysteine hydrolase, NAD binding domain
112HAMP domain
224ribosomal L5P family C-terminus
6612Insulinase (Peptidase family M16)
336Dehydrogenase E1 component
112Lumazine binding domain
7714Elongation factor G C-terminus
448HMGL-like
448DnaJ central domain
4610Starch binding domain
224Ribosomal protein L1p/L10e family
6511Cation transporting ATPase, C-terminus
6612Cation transporter/ATPase, N-terminus
123dUTPase
448Aconitase C-terminal domain
336Amino acid kinase family
112N-(5'phosphoribosyl)anthranilate (PRA) isomerase
4812Acyl transferase domain
11Urease beta subunit
134Dihydrodipicolinate synthetase family
213253haloacid dehalogenase-like hydrolase
123Glycosyl hydrolases family 2
21113Glycosyl hydrolases family 18
112Proliferating cell nuclear antigen, N-terminal domain
112Acylphosphatase
112Adenylosuccinate synthetase
134Asparaginase, N-terminal
235Peptidase S24-like
112Inorganic pyrophosphatase
7714Glycosyl hydrolases family 16
134Glycosyl hydrolases family 15
156NADH:flavin oxidoreductase / NADH oxidase family
1343-hydroxyacyl-CoA dehydrogenase, C-terminal domain
112Glycosyl hydrolase family 20, catalytic domain
347HhH-GPD superfamily base excision DNA repair protein
112AIR carboxylase
1910GMC oxidoreductase
347Asparagine synthase
5510Septin
112EF-1 guanine nucleotide exchange domain
112Homoserine dehydrogenase
336tRNA synthetases class I (E and Q), catalytic domain
112tRNA synthetases class I (R)
459XPG N-terminal domain
41216Metallo-beta-lactamase superfamily
11F5/8 type C domain
224Choline/Carnitine o-acyltransferase
112Putative esterase
112Ferrochelatase
224Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
112Arginosuccinate synthase
112Electron transfer flavoprotein FAD-binding domain
336RNB domain
235Dioxygenase
336CNH domain
224Diacylglycerol kinase catalytic domain
5712Dual specificity phosphatase, catalytic domain
224P21-Rho-binding domain
131124PX domain
325Ras association (RalGDS/AF-6) domain
5510UBX domain
448VHS domain
112Phosphoinositide 3-kinase C2
224DAHP synthetase I family
6814Carbon-nitrogen hydrolase
22N-acetyltransferase
112Prephenate dehydratase
246Syntaxin
459Pumilio-family RNA binding repeat
6612Histone-like transcription factor (CBF/NF-Y) and archaeal histone
112Pterin binding enzyme
224ER lumen protein retaining receptor
224tRNA N6-adenosine threonylcarbamoyltransferase
112Histidinol dehydrogenase
448impB/mucB/samB family
112
112Ribosomal L15
112Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
112Ribosomal L28 family
112Ribosomal L29 protein
112Ribosomal L39 protein
112Ribosomal S17
112Ribulose-phosphate 3 epimerase family
112Translationally controlled tumour protein
112RNA pseudouridylate synthase
448Histone deacetylase domain
178POT family
112PWWP domain
191736SET domain
1010Isochorismatase family
22Permease family
112Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
448XPG I-region
112Acetokinase family
11AcrB/AcrD/AcrF family
145DNA photolyase
112Cation-independent mannose-6-phosphate receptor repeat
22Nitroreductase family
5510Sulfatase
1126,7-dimethyl-8-ribityllumazine synthase
112Ribosomal protein S16
123Acyl CoA binding protein
448Cullin family
257FAD binding domain
167O-methyltransferase domain
4610EamA-like transporter family
224
8816ThiF family
112Ribosomal family S4e
257Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
11T-box
134Ammonium Transporter Family
336Sulfate permease family
112MATH domain
235Dehydratase family
123Transaldolase/Fructose-6-phosphate aldolase
235Mechanosensitive ion channel
123GTP cyclohydrolase II
1123,4-dihydroxy-2-butanone 4-phosphate synthase
448Adaptor complexes medium subunit family
5510Exonuclease
112Dipeptidyl peptidase IV (DPP IV) N-terminal region
167Glycosyl hydrolase family 3 N terminal domain
112Ribosomal protein L44
112DNA-dependent RNA polymerase
11FAD binding domain in molybdopterin dehydrogenase
112Glycosyl transferase family 4
123HCO3- transporter family
224Nucleosome assembly protein (NAP)
448Synaptobrevin
112GMP synthase C terminal domain
257Adenosine/AMP deaminase
31013Oxidoreductase FAD-binding domain
347Thioesterase domain
235Histidine biosynthesis protein
336Glycosyltransferase family 20
11UDP-glucose/GDP-mannose dehydrogenase family, central domain
224Carbamoyl-phosphate synthase small chain, CPSase domain
325PAS fold
22Probable molybdopterin binding domain
448Sec1 family
224GDP dissociation inhibitor
4711Sodium/hydrogen exchanger family
224RNA polymerase Rpb3/RpoA insert domain
448Initiation factor 2 subunit family
224Electron transfer flavoprotein domain
11Uricase
112Ribosomal S3Ae family
112Ribosomal L27 protein
112GTP1/OBG
336Gamma-glutamyltranspeptidase
11Ribosomal L40e family
112GrpE
224TatD related DNase
112Inhibitor of apoptosis-promoting Bax1
112Eukaryotic DNA topoisomerase I, catalytic core
426Dynamin central region
2246-O-methylguanine DNA methyltransferase, DNA binding domain
123Bacteriorhodopsin-like protein
134Carboxyl transferase domain
224UbiA prenyltransferase family
167Endoribonuclease L-PSP
11Phosphorylase superfamily
5510Cys/Met metabolism PLP-dependent enzyme
5914Glycosyl hydrolases family 31
123NADH ubiquinone oxidoreductase, 20 Kd subunit
6814ABC-2 type transporter
358Amino-transferase class IV
4711CDP-alcohol phosphatidyltransferase
112Calpain large subunit, domain III
448ATP dependent DNA ligase domain
31316FMN-dependent dehydrogenase
112Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
1453-beta hydroxysteroid dehydrogenase/isomerase family
112Glycosyl hydrolases family 38 N-terminal domain
123Nitrite and sulphite reductase 4Fe-4S domain
33Cutinase
112Ribosomal protein S18
112Clathrin light chain
112Galactose-1-phosphate uridyl transferase, N-terminal domain
347Ubiquitin carboxyl-terminal hydrolase, family 1
112Ribosomal protein S19e
112Ribosomal protein S6e
347Transcription factor S-II (TFIIS)
22Arthropod defensin
112Omp85 superfamily domain
448emp24/gp25L/p24 family/GOLD
112NifU-like domain
112Cyclin-dependent kinase regulatory subunit
123Asparaginase
112F-actin capping protein, beta subunit
224Fructose-bisphosphate aldolase class-II
325Semialdehyde dehydrogenase, NAD binding domain
325DNA mismatch repair protein, C-terminal domain
112Dephospho-CoA kinase
123MAPEG family
112G10 protein
112Succinate dehydrogenase/Fumarate reductase transmembrane subunit
112DNA topoisomerase
112Glucose inhibited division protein A
112Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
224RNA 3'-terminal phosphate cyclase
46103' exoribonuclease family, domain 1
112tRNA pseudouridine synthase D (TruD)
112Coenzyme A transferase
549SPFH domain / Band 7 family
336Cytidylyltransferase family
112Formamidopyrimidine-DNA glycosylase N-terminal domain
224GDA1/CD39 (nucleoside phosphatase) family
224GNS1/SUR4 family
112Hydroxymethylglutaryl-coenzyme A synthase N terminal
246Inosine-uridine preferring nucleoside hydrolase
112Ribosomal protein L21e
112Ribosomal protein L36e
112Ribosomal protein L6e
44Phosphatidylethanolamine-binding protein
112
224RIO1 family
123Alanine racemase, N-terminal domain
112Uncharacterized protein family UPF0016
224Putative RNA methylase family UPF0020
224PP-loop family
112Shwachman-Bodian-Diamond syndrome (SBDS) protein
112SNO glutamine amidotransferase family
123Translation initiation factor 1A / IF-1
22Asp/Glu/Hydantoin racemase
156Copper amine oxidase, enzyme domain
123Dihydroorotate dehydrogenase
11Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
415Glycosyl hydrolases family 25
123GPR1/FUN34/yaaH family
112Macrophage migration inhibitory factor (MIF)
33
44816S rRNA methyltransferase RsmB/F
112RNA polymerase Rpb5, C-terminal domain
112RNA polymerase Rpb6
549RNA polymerase Rpb3/Rpb11 dimerisation domain
112RNA polymerases N / 8 kDa subunit
112Peptidyl-tRNA hydrolase
112Ribosomal protein L17
112Ribosomal protein L31e
112Ribosomal protein L34e
112Ribosomal protein S28e
224Ribosomal protein S8e
235Shikimate kinase
22Trehalase
123Uncharacterized protein family UPF0029
347Dihydrouridine synthase (Dus)
112Uroporphyrinogen decarboxylase (URO-D)
112ubiE/COQ5 methyltransferase family
112NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
33Beta-eliminating lyase
112Adenylate cyclase associated (CAP) N terminal
224Casein kinase II regulatory subunit
112Cytochrome c oxidase subunit Vb
6511Clathrin adaptor complex small chain
112Coproporphyrinogen III oxidase
11Dehydroquinase class II
112Dynein light chain type 1
224Ergosterol biosynthesis ERG4/ERG24 family
112DNA/RNA non-specific endonuclease
11Formate/nitrite transporter
112GTP cyclohydrolase I
11Glycosyl hydrolases family 39
448HIT domain
123Indoleamine 2,3-dioxygenase
213Mannitol dehydrogenase Rossmann domain
112Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
6612Oxysterol-binding protein
213Phosphomannose isomerase type I
224Protein prenyltransferase alpha subunit repeat
257Pyridoxamine 5'-phosphate oxidase
112Membrane dipeptidase (Peptidase family M19)
11Ribosomal protein L19
224Ribosomal protein L24e
112Ribosomal protein L35Ae
5510Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
112Ribosomal protein S21e
112Ribosomal protein S7e
336Translation initiation factor SUI1
112Putative undecaprenyl diphosphate synthase
112Carbohydrate kinase
112Thioredoxin-like [2Fe-2S] ferredoxin
112SAICAR synthetase
257Xylose isomerase-like TIM barrel
123Alanine dehydrogenase/PNT, C-terminal domain
347Aldose 1-epimerase
112Chorismate synthase
224Cytochrome c/c1 heme lyase
103343FAD dependent oxidoreductase
112F-actin capping protein alpha subunit
11Formate--tetrahydrofolate ligase
112Fibrillarin
112Malate synthase
112Ribosomal protein L19e
11Ribosomal protein L9, N-terminal domain
112Ribosomal protein S24e
112Ribosomal protein S26e
112TEA/ATTS domain
112Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
117,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
112Phosphoenolpyruvate carboxykinase
112Ribosomal protein L13e
112Telomere recombination
11Glycosyl hydrolases family 35
437CAP-Gly domain
112
11Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
123Creatinase/Prolidase N-terminal domain
145DSBA-like thioredoxin domain
44Peroxidase, family 2
112Pterin 4 alpha carbinolamine dehydratase
112mRNA capping enzyme, catalytic domain
9918OB-fold nucleic acid binding domain
4913Kelch motif
112Ribonuclease HII
22Tautomerase enzyme
6511FYVE zinc finger
11DHH family
448Sec7 domain
62329NAD dependent epimerase/dehydratase family
123Porphobilinogen deaminase, dipyromethane cofactor binding domain
123SIS domain
11Helix-turn-helix
22Phosphate transporter family
336ARID/BRIGHT DNA binding domain
11Collagen triple helix repeat (20 copies)
11Chromo shadow domain
112Clathrin propeller repeat
7714JAB1/Mov34/MPN/PAD-1 ubiquitin protease
131528PCI domain
112tRNA synthetases class I (C) catalytic domain
21012Oxidoreductase family, NAD-binding Rossmann fold
224tRNA synthetases class II core domain (F)
123tRNA synthetases class II (A)
459Putative GTPase activating protein for Arf
224tRNA pseudouridine synthase
224ENTH domain
11Reprolysin (M12B) family zinc metalloprotease
224NF-X1 type zinc finger
161632LSM domain
257R3H domain
41519Amidase
336BAH domain
112AN1-like Zinc finger
246Peptidase family M3
336Peptidase family M1 domain
224Peptidase family M41
224Peptidase family M48
11Plexin repeat
112Acetohydroxy acid isomeroreductase, catalytic domain
112Low molecular weight phosphotyrosine protein phosphatase
112MAGE family
224Eukaryotic porin
11
11Transglycosylase SLT domain
11GRIP domain
314Skp1 family, dimerisation domain
358Cytidylyltransferase-like
11Pyroglutamyl peptidase
336PUA domain
11Putative cell wall binding repeat
112Class-II DAHP synthetase family
279LysM domain
448S4 domain
112PWI domain
112Proprotein convertase P-domain
279IBR domain, a half RING-finger domain
112Type I 3-dehydroquinase
336Shikimate / quinate 5-dehydrogenase
91524Transmembrane amino acid transporter protein
112Frataxin-like domain
112GXGXG motif
131528FAD binding domain
112V-type ATPase 116kDa subunit family
3710Glycosyl transferase family 8
112Phosphoribosyl-AMP cyclohydrolase
112Phosphoribosyl-ATP pyrophosphohydrolase
224Phosphatidylinositol-4-phosphate 5-Kinase
224Phosphoadenosine phosphosulfate reductase family
224TruB family pseudouridylate synthase (N terminal domain)
112Respiratory-chain NADH dehydrogenase 51 Kd subunit
336ATP-NAD kinase
224Iron-sulphur cluster biosynthesis
33Polysaccharide deacetylase
11Tn3 transposase DDE domain
6511DHHC palmitoyltransferase
7916Glycosyl hydrolase family 47
7613PPR repeat
112Adenosylmethionine decarboxylase
112GIY-YIG catalytic domain
369CorA-like Mg2+ transporter protein
8715Cation efflux family
4711Peptidase family M20/M25/M40
7714Acyltransferase
246MatE
549DnaJ C terminal domain
347Fumarylacetoacetate (FAA) hydrolase family
11Pyruvate ferredoxin/flavodoxin oxidoreductase
112Spermine/spermidine synthase domain
41216FAD binding domain
112Natural resistance-associated macrophage protein
5510PAP2 superfamily
224Aminomethyltransferase folate-binding domain
235MaoC like domain
22Myosin tail
224Adenylylsulphate kinase
3811G-patch domain
112Putative tRNA binding domain
3710GAF domain
3366-phosphofructo-2-kinase
112NifU-like N terminal domain
81220Flavin containing amine oxidoreductase
112Cyclin M transmembrane N-terminal domain
22O-methyltransferase
112Glycine cleavage H-protein
336
112Ribosomal protein S27a
8816Adaptin N terminal region
213Protein phosphatase 2A regulatory B subunit (B56 family)
11Chitin binding Peritrophin-A domain
112I/LWEQ domain
2353'-5' exonuclease
11Flavin reductase like domain
145Proline dehydrogenase
448MutS domain I
112Peptide methionine sulfoxide reductase
112Hpt domain
123Choline/ethanolamine kinase
112ATP phosphoribosyltransferase
246Phosphotransferase enzyme family
112SelR domain
336Chitin synthase
112Conserved region in glutamate synthase
2244'-phosphopantetheinyl transferase superfamily
112Peptidase C13 family
336Eukaryotic initiation factor 4E
112Ribosomal protein L32
11CobQ/CobB/MinD/ParA nucleotide binding domain
112Myo-inositol-1-phosphate synthase
134Macro domain
246Type I phosphodiesterase / nucleotide pyrophosphatase
112Ribosomal protein S27
112Metalloenzyme superfamily
257Proteolipid membrane potential modulator
112SOR/SNZ family
112Riboflavin kinase
347Rhomboid family
6713Sodium/calcium exchanger protein
224Queuine tRNA-ribosyltransferase
224UTP--glucose-1-phosphate uridylyltransferase
11Transcriptional regulator
336Smr domain
112IPP transferase
235Cobalamin-independent synthase, Catalytic domain
336BolA-like protein
112Ham1 family
347FtsJ-like methyltransferase
112Quinolinate phosphoribosyl transferase, C-terminal domain
112Nucleoside transporter
9918Patatin-like phospholipase
224Lysophospholipase catalytic domain
41115Dienelactone hydrolase family
336STAS domain
112Poly A polymerase head domain
112tRNA (Guanine-1)-methyltransferase
112ATP-sulfurylase
11Importin beta binding domain
112Toprim domain
639MYND finger
123Acyl-CoA oxidase
224Acyltransferase family
1233-dehydroquinate synthase
22Lipase (class 3)
112Ribosome recycling factor
11Na+ dependent nucleoside transporter N-terminus
11UreD urease accessory protein
112Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
112Ribosomal L22e protein family
112Ribosomal L27e protein family
112Ribosomal L28e protein family
112Ribosomal L29e protein family
112Ribosomal L37ae protein family
112Ribosomal L38e protein family
112Ribosomal L32p protein family
112NIF3 (NGG1p interacting factor 3)
11Alternative oxidase
112DeoC/LacD family aldolase
347Glycolipid 2-alpha-mannosyltransferase
51520Ferric reductase like transmembrane component
336snoRNA binding domain, fibrillarin
11[2Fe-2S] binding domain
112Surp module
112AICARFT/IMPCHase bienzyme
1125-formyltetrahydrofolate cyclo-ligase family
112ATP synthase subunit D
11Chorismate mutase type II
369WSC domain
11IPT/TIG domain
112Transglutaminase-like superfamily
347ACT domain
224DIL domain
213FF domain
224NAC domain
235Proteasome/cyclosome repeat
336MOZ/SAS family
112Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
426Putative diphthamide synthesis protein
11Domain of unknown function UPF0086
112AMMECR1
112RibD C-terminal domain
224Domain found in IF2B/IF5
112Memo-like protein
112RNase P subunit p30
11EVE domain
112Iron-sulfur cluster assembly protein
112RNA 2'-phosphotransferase, Tpt1 / KptA family
112Uncharacterised protein family UPF0047
112DNA primase small subunit
112Rpp14/Pop5 family
112Diphthamide synthase
112Ribosomal protein L37e
123Nucleotidyltransferase domain
11Thiamine-binding protein
112eIF-6 family
156Glycosyl hydrolase family 3 C-terminal domain
213Deoxyhypusine synthase
448Prefoldin subunit
112SRP19 protein
10112150S ribosome-binding GTPase
112Ribosomal protein L14
112Uncharacterised protein family UPF0052
112Protein of unknown function DUF89
11TRAM domain
112Integral membrane protein DUF92
11Polysaccharide biosynthesis protein
11Thi4 family
11Domain of unknown function DUF108
112ArgJ family
224DJ-1/PfpI family
145HD domain
11MoaC family
112Hydantoinase/oxoprolinase
224tRNA intron endonuclease, catalytic C-terminal domain
22Survival protein SurE
11314Amidohydrolase family
112Peptidyl-tRNA hydrolase PTH2
112Double-stranded DNA-binding domain
224Mitochondrial biogenesis AIM24
123VIT family
11Aconitase X swivel domain
112ATP synthase (F/14-kDa) subunit
112ATP synthase (E/31 kDa) subunit
112ATP synthase (C/AC39) subunit
224Translin family
112TFIIE alpha subunit
112N2,N2-dimethylguanosine tRNA methyltransferase
112BNR/Asp-box repeat
11Carbohydrate binding domain
213eIF4-gamma/eIF5/eIF2-epsilon
112SCP-2 sterol transfer family
5611SAP domain
112CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
112Cytochrome c oxidase subunit VIa
11Glycosyl hydrolase family 30 TIM-barrel domain
112MAS20 protein import receptor
123Melibiase
112Aromatic-di-Alanine (AdAR) repeat
11Pheromone A receptor
112SURF4 family
112Palmitoyl protein thioesterase
11260Kd inner membrane protein
112Ornithine decarboxylase antizyme
22Deuterolysin metalloprotease (M35) family
112SURF1 family
112DAD family
11Hydroxyethylthiazole kinase family
112cAMP phosphodiesterases class-II
213Phosducin
112RHO protein GDP dissociation inhibitor
112Fungal pheromone mating factor STE2 GPCR
224Aminopeptidase I zinc metalloprotease (M18)
4812Permease for cytosine/purines, uracil, thiamine, allantoin
336
224Nuclear transport factor 2 (NTF2) domain
11Adenosine-deaminase (editase) domain
112Beige/BEACH domain
224DENN (AEX-3) domain
224MGS-like domain
112Repair protein Rad1/Rec1/Rad17
112Rap/ran-GAP
4610Sir2 family
224Zn-finger in ubiquitin-hydrolases and other protein
112Kinase associated domain 1
213RNA polymerases M/15 Kd subunit
11Dihydroneopterin aldolase
11XYPPX repeat (two copies)
112Cytochrome C1 family
336PAZ domain
336Piwi domain
11TRAF-type zinc finger
41014AT hook motif
11BAG domain
112Formin Homology 2 Domain
112HAT (Half-A-TPR) repeat
224Hr1 repeat
112Growth-Arrest-Specific Protein 2 Domain
235ATP-dependent protease La (LON) substrate-binding domain
336PXA domain
112Regulatory subunit of type II PKA R-subunit
112STE like transcription factor
224SWIB/MDM2 domain
224Vacuolar sorting protein 9 (VPS9) domain
336WH2 motif
224Putative zinc finger in N-recognin (UBR box)
224Dynamin GTPase effector domain
123GYF domain
224Methylenetetrahydrofolate reductase
112ML domain
112ATP-grasp domain
112Thymidylate kinase
369PA domain
112Transcriptional Coactivator p15 (PC4)
369Phospholipase/Carboxylesterase
11NAD(P) transhydrogenase beta subunit
11Cytochrome c oxidase subunit VII
112RFX DNA-binding domain
224FAT domain
448FATC domain
112S1/P1 Nuclease
213Transcription initiation factor IIA, gamma subunit, helical domain
224Transcription initiation factor IID, 18kD subunit
112TFIIF, beta subunit HTH domain
112Ubiquinol-cytochrome C reductase complex 14kD subunit
112DHHA1 domain
112Cytochrome c oxidase subunit Va
112Signal recognition particle 14kD protein
112Transcription initiation factor IID, 31kD subunit
448
112Alpha adaptin AP2, C-terminal domain
112Cytochrome oxidase c subunit VIb
325HORMA domain
112Ubiquinol-cytochrome C reductase hinge protein
11Outer membrane efflux protein
112Mitochondrial glycoprotein
235OTU-like cysteine protease
112Glycine cleavage system P-protein
123Mycolic acid cyclopropane synthetase
224Trehalose-phosphatase
224Cell division protein 48 (CDC48), N-terminal domain
1121,3-beta-glucan synthase component
336Dolichyl-phosphate-mannose-protein mannosyltransferase
459JmjC domain, hydroxylase
112Anion-transporting ATPase
224jmjN domain
347SacI homology domain
123Cation transport protein
112Putative methyltransferase
11MoaE protein
224Seryl-tRNA synthetase N-terminal domain
112Ornithine cyclodeaminase/mu-crystallin family
112Conserved carboxylase domain
112Flavoprotein
112Lecithin:cholesterol acyltransferase
11Reticulon
66Transferase family
112Patched family
7411RecF/RecN/SMC N terminal domain
11Competence-damaged protein
347Tim17/Tim22/Tim23/Pmp24 family
224Fasciclin domain
112Met-10+ like-protein
112CLN3 protein
246CobW/HypB/UreG, nucleotide-binding domain
11MORN repeat
112Ribose/Galactose Isomerase
235CoA-transferase family III
112Oligosaccharyl transferase STT3 subunit
112CPBP intramembrane metalloprotease
152742Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
11Aminoglycoside 3-N-acetyltransferase
5611ZIP Zinc transporter
112CrcB-like protein, Camphor Resistance (CrcB)
112Hydantoinase B/oxoprolinase
112NAD synthase
112Ppx/GppA phosphatase family
3363-oxo-5-alpha-steroid 4-dehydrogenase
112Maf-like protein
112Ketopantoate hydroxymethyltransferase
112Acetyl-CoA hydrolase/transferase N-terminal domain
112Acyl-CoA thioesterase
358Ketopantoate reductase PanE/ApbA
112Cyanate lyase C-terminal domain
22OsmC-like protein
112Phenazine biosynthesis-like protein
112Pantoate-beta-alanine ligase
112Homocysteine S-methyltransferase
112D-Tyr-tRNA(Tyr) deacylase
11Thiamine monophosphate synthase
336Uncharacterised ACR, YagE family COG1723
112GlcNAc-PI de-N-acetylase
2