PFAM Domains • Armillaria
Annotations/GenomesArmbor1Armcep1Armect1Armfum1Armga1Armlut1Armme1_1Armmel1Armnab1Armnov1Armost1Armosto1Armtab1TotalAnnotation Description
PFAMs
12,50615,08210,24811,54910,40012,9488,64811,42612,40212,10710,01513,84712,473153,651
111111177 transmembrane receptor (rhodopsin family)
46454646536242494551484645624ATPase family associated with various cellular activities (AAA)
67715061656965606267667064837ABC transporter
444444444444452ATP synthase alpha/beta family, nucleotide-binding domain
224EGF-like domain
15151515151515151515151515195Elongation factor Tu GTP binding domain
16141314131413121311141513175Helix-loop-helix DNA-binding domain
131312117129111112101113145Hsp20/alpha crystallin family
1112914912811109101010135Hsp70 protein
8888887888888103KH domain
1113SH2 domain
17191918311829161817312120274SH3 domain
11131111111413111111111112151Actin
11198107014338131549116267Ankyrin repeat
8878886888888101ADP-ribosylation factor family
30302829323829302929302829391Eukaryotic aspartyl protease
444454444444554Cyclic nucleotide-binding domain
11111111111112Cytochrome c
91171214106711117811124Double-stranded RNA binding motif
132220220222224385EF hand
1222184Fe-4S binding domain
1113Fibronectin type III domain
71056101289910978110Glutathione S-transferase, C-terminal domain
221111111111115Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
81191113119101011111113138Homeodomain
222233322332231lactate/malate dehydrogenase, NAD binding domain
754444544565461Myosin head (motor domain)
2723251922383243212462512892782742713113,592Cytochrome P450
2802741872292212381542172522262262592583,021Protein kinase domain
13121111171517121313161411175Pyridine nucleotide-disulphide oxidoreductase
29262627252722272728252729345Ras family
12111211121511121111121311154Response regulator receiver domain
2719111323276102029213217255RNase H
66686767777271656562706664880RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
485271336849Reverse transcriptase (RNA-dependent DNA polymerase)
4554410444744564Copper/zinc superoxide dismutase (SODC)
322222232232229Iron/manganese superoxide dismutases, alpha-hairpin domain
2119131910206211716122214210Subtilase family
54595251475343565252435159672Sugar (and other) transporter
15191414171912131516161517202Thioredoxin
555555555554665Tubulin/FtsZ family, GTPase domain
53614von Willebrand factor type A domain
514742411125456515549954354750Zinc finger, C2H2 type
141581399124691013981319369Zinc finger, C3HC4 type (RING finger)
10269610361119581298017712835Zinc knuckle
333323233323235Protein-tyrosine phosphatase
153152901241491411221261481261431371561,767short chain dehydrogenase
43393740424041424238434045532Zinc-binding dehydrogenase
555645465545564Thiolase, N-terminal domain
126781012699710109115Beta-ketoacyl synthase, N-terminal domain
1111312111311182Fe-2S iron-sulfur cluster binding domain
111111111111113Enolase, C-terminal TIM barrel domain
8989898889788107Glutamine amidotransferase class-I
10101010101111111010101010133TCP-1/cpn60 chaperonin family
555454555445561Glutamine synthetase, catalytic domain
111111111111113Triosephosphate isomerase
18181818132212171720131819223E1-E2 ATPase
1416918212016182218191920230Core histone H2A/H2B/H3/H4
111141411161124Copper binding proteins, plastocyanin/azurin family
14121313121312131313121313166Alpha amylase, catalytic domain
554464356475462Phorbol esters/diacylglycerol binding domain (C1 domain)
563665366745567Bacterial transferase hexapeptide (six repeats)
574454556475465tRNA synthetases class I (I, L, M and V)
991112101161191110119129Cyclin, N-terminal domain
40372935373933403634423651489Carboxylesterase family
456444444844560DNA polymerase family B
333333333333339ATP synthase subunit C
141210911121012129121211146Peroxidase
343333133533441Beta-lactamase
684655575676777C-5 cytosine-specific DNA methylase
28272526302825272728302426351Calcineurin-like phosphoesterase
18191720112211201919121819225Cellulase (glycosyl hydrolase family 5)
555565555555566tRNA synthetases class II (D, K and N)
44424040444232404143414343535Mitochondrial carrier protein
11recA bacterial DNA recombination protein
17181919202014191818202025247Aminotransferase class I and II
544374644473459Phosphoribosyl transferase domain
15141416151412151415151414187Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111111113Phosphoglycerate kinase
212222122232225Ribosomal protein S4/S9 N-terminal domain
222222222332228Ribosomal protein S12/S23
222222222222226Chaperonin 10 Kd subunit
16161516171614151414171615201C2 domain
11121010221017101212201110167PH domain
11121010810791297911125bZIP transcription factor
26272521282220222923232630322Aldehyde dehydrogenase family
111679611412411748103116110122791001,307Fungal Zn(2)-Cys(6) binuclear cluster domain
22232422252423242423242325306Cytochrome b5-like Heme/Steroid binding domain
222232222222227Oxidoreductase molybdopterin binding domain
91079101181110131097124Oxidoreductase NAD-binding domain
25282528273323282527262626347SNF2 family N-terminal domain
222222222222226Ribosomal protein S7p/S5e
24222524242621232324232423306Ubiquitin-conjugating enzyme
555555555555666Isocitrate/isopropylmalate dehydrogenase
332222222122227Ribosomal Proteins L2, RNA binding domain
222223222222227Hsp90 protein
222232223233230Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111112Dihydrofolate reductase
655667657667678Cysteine-rich secretory protein family
111111111111113Ribosomal protein S3, C-terminal domain
464564645552258Cupin
111111111112114Annexin
3333333333333392-oxoacid dehydrogenases acyltransferase (catalytic domain)
15454455444915684Catalase
11111111111112Disintegrin
443515244314343UDP-glucoronosyl and UDP-glucosyl transferase
676668665766681Aminotransferase class-III
462224222222234Ribosomal protein S19
111111111111113DNA gyrase B
333332333333338Thiamine pyrophosphate enzyme, central domain
444444544444453Lyase
222223422222330Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
111111111111113Adenylate and Guanylate cyclase catalytic domain
111111111111113ATP synthase delta (OSCP) subunit
111111111111113Orotidine 5'-phosphate decarboxylase / HUMPS family
232232224222230Indole-3-glycerol phosphate synthase
333333333334441Aromatic amino acid lyase
111111111111113Pyruvate kinase, barrel domain
10121011111112101010101010137Kinesin motor domain
33293133313129292930333031399DnaJ domain
14141414141714141415141417189Proteasome subunit
655558655555671Major intrinsic protein
111111111111113ATP synthase
1219671413109148101015147Glycosyl hydrolase family 1
1111111111111133'5'-cyclic nucleotide phosphodiesterase
111111111111113Profilin
222222122222225Ribosomal protein L22p/L17e
222232122222226Ribosomal protein L14p/L23e
27211822252715202325242219288Ubiquitin family
555556675555569Cofilin/tropomyosin-type actin-binding protein
22222322222222714-3-3 protein
111131411131120Alkaline phosphatase
111111111111113Zinc carboxypeptidase
58724858617950586755575765785Aldo/keto reductase family
979813111099813810124Myb-like DNA-binding domain
91010991061010109109121Forkhead domain
242213122212226Ribosomal protein L16p/L10e
22222222222224Ribosomal protein S14p/S29e
545555555555665FKBP-type peptidyl-prolyl cis-trans isomerase
111121111311116Glutathione peroxidase
1113
6667988767107592Flavodoxin
111111111111113Calreticulin family
15151115121711141417131416184Common central domain of tyrosinase
89989979109988112Aminotransferase class-V
1382215524102714589Ribonucleotide reductase, small chain
73775258556546606363517278813DEAD/DEAH box helicase
9710078879492869088889492961,182Helicase conserved C-terminal domain
121111112111115EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222223222222227Ribosomal protein L23
111111111111113Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111111111113Ribosomal protein L5
664454545556564Pyridoxal-dependent decarboxylase conserved domain
444434354534552Citrate synthase, C-terminal domain
555555455555564GHMP kinases N terminal domain
566666786765680Biotin carboxylase, N-terminal domain
111111111111113Tryptophan synthase alpha chain
8898887889888105Pyridoxal-phosphate dependent enzyme
13131313151410141314151213172NUDIX domain
655657455555568pfkB family carbohydrate kinase
19182216181821181616161521234Glycosyl hydrolases family 28
222121212122222Ribosomal protein L3
222222221222225Ribosomal protein L11, RNA binding domain
13131010121359129121310141Histidine phosphatase superfamily (branch 1)
111111111111113Thymidylate synthase
444444444444452ATP synthase alpha/beta chain, C terminal domain
444455354644658Calponin homology (CH) domain
222262522252337Glutamine amidotransferases class-II
222222332222228Ribosomal protein S15
444554555544559Thaumatin family
111111111111113Fructose-1-6-bisphosphatase, N-terminal domain
111111111121114Ribonucleotide reductase, all-alpha domain
222222222222226Ribosomal protein S2
212222222222225SRF-type transcription factor (DNA-binding and dimerisation domain)
11109151010810101011910133GATA zinc finger
14141214321421131416321615227Amino acid permease
1315Bacterial regulatory proteins, crp family
566566555656773Prolyl oligopeptidase family
222212122211222Ribosomal protein L30p/L7e
8889989799988109Histidine phosphatase superfamily (branch 2)
111111111111113Respiratory-chain NADH dehydrogenase, 30 Kd subunit
555557555656569Aconitase family (aconitate hydratase)
6611865675566582Glycosyl hydrolase family 10
22222212122222Glycosyl hydrolases family 17
322222222122226Ribosomal protein S5, N-terminal domain
222222222222226Nucleoside diphosphate kinase
324223122522333Tetraspanin family
222212122212223Ribosomal protein S10p/S20e
442314145324340Arrestin (or S-antigen), N-terminal domain
111111111111113Phosphoglucose isomerase
111111211111114Carbohydrate phosphorylase
111111111111113SecY translocase
112111111111114Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222222222226Ribosomal protein L6
1529513181312828811166182Polyprenyl synthetase
222322222222227Hexokinase
1316111312156121314101213160Dynamin family
111111111221115Transcription factor TFIID (or TATA-binding protein, TBP)
213233233332232Rieske [2Fe-2S] domain
112121111213Phytochrome region
108899989910999116Biotin-requiring enzyme
111111111111113Phosphofructokinase
222222122222225Ribosomal protein S17
121111111111114Hydroxymethylglutaryl-coenzyme A reductase
333343433343342FGGY family of carbohydrate kinases, N-terminal domain
10991110101010910999125Enoyl-CoA hydratase/isomerase
222222222222226Ribosomal protein S9/S16
322222222232228Transcription factor TFIIB repeat
10688893898978101Cytidine and deoxycytidylate deaminase zinc-binding region
111111111111113Molybdopterin oxidoreductase
834189111065989823513734Chromo (CHRromatin Organisation MOdifier) domain
333333333333238Phosphatidylinositol-specific phospholipase C, Y domain
555438355435560Phosphatidylinositol-specific phospholipase C, X domain
666667556666677D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
332333333333237Malic enzyme, N-terminal domain
1111111111111136-phosphogluconate dehydrogenase, C-terminal domain
26262824262526242526252527333Multicopper oxidase
87991310108991479122WW domain
222222122222225Ribosomal RNA adenine dimethylase
1221391131281301461021141271341201211281,624WD domain, G-beta repeat
443444344444349Heavy-metal-associated domain
433333333333340Adenylate kinase
222213122212224Phosphoglucomutase/phosphomannomutase, C-terminal domain
222212122212223Ribosomal protein S8
222726222722240Ribosomal protein S11
555565255555563LIM domain
554744455635461Regulator of chromosome condensation (RCC1) repeat
222222222222226Ribosomal protein S13/S18
222222222222226chorismate binding enzyme
33333433333334060s Acidic ribosomal protein
544444344444452Prenyltransferase and squalene oxidase repeat
444464644464458Protein kinase C terminal domain
111111111111113Single-strand binding protein family
111111111111113S-adenosylmethionine synthetase, N-terminal domain
10101010101011101010101011132Bromodomain
7758777777771093Acyl-CoA dehydrogenase, C-terminal domain
15181515181616151718151515208Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
222222222222226Ribonuclease T2 family
655556555655568HSF-type DNA-binding
222222222222226SRP54-type protein, GTPase domain
111111111111113Urease alpha-subunit, N-terminal domain
17181414161818151613151815207Serine carboxypeptidase
112Apoptosis regulator proteins, Bcl-2 family
8888888888888104Phosphatidylinositol 3- and 4-kinase
444545554544558Transketolase, thiamine diphosphate binding domain
1111322111115Glycosyl hydrolases family 11
111111111111113WHEP-TRS domain
665465436557466Inositol monophosphatase family
555555555555666Glutaredoxin
222232322232229Isocitrate lyase family
222223322222228Serine hydroxymethyltransferase
766675476866680Iron-containing alcohol dehydrogenase
222223122222226Ribosomal protein L10
342259533453351KOW motif
111111111110Ribosomal protein L34
111111111110Ribosomal protein L33
323223143322232RF-1 domain
333333134444442Sodium:solute symporter family
111111121111114Imidazoleglycerol-phosphate dehydratase
111111111111113DNA polymerase family A
111111111111113IMP dehydrogenase / GMP reductase domain
111111111111113Glucose-6-phosphate dehydrogenase, NAD binding domain
12129119158121213111212148Protein phosphatase 2C
333333233333338Nucleotidyl transferase
775667776677684Carbonic anhydrase
121111111111114Phosphoribulokinase / Uridine kinase family
21181917182015171921201722244Fatty acid desaturase
687666666667783MutS domain V
111111111111113Delta-aminolevulinic acid dehydratase
555755555555567Arginase family
666766686666681MCM P-loop domain
222212122212223Squalene/phytoene synthase
1215111312139131314121213162FHA domain
74845463717756627370697474901AMP-binding enzyme
24201521222219202024212021269G-protein alpha subunit
25292129303026252628262624345HMG (high mobility group) box
11Cytochrome c oxidase subunit III
67788116888888101His Kinase A (phospho-acceptor) domain
433343323343341Armadillo/beta-catenin-like repeat
17211517411932182020321917288Tetratricopeptide repeat
333334333348245Ion transport protein
111111111111113DNA gyrase/topoisomerase IV, subunit A
11Binding-protein-dependent transport system inner membrane component
5786118871051198103BRCA1 C Terminus (BRCT) domain
5755948684107583Glycosyl transferases group 1
343353434343345Glycosyl transferase family 2
1121111122114SAM domain (Sterile alpha motif)
444444444444452linker histone H1 and H5 family
111111111111113Ribosomal protein L7/L12 C-terminal domain
666656566656675Pectate lyase
452644146545252ribonuclease
111111111111113Urease, gamma subunit
333333343433442CoA-ligase
262313