PFAM Domains • Serpula lacrymans S7.3 v2.0
Annotations/GenomesHetan1Lacbi1Phchr1PleosPC15_1Pospl1Schco1SerlaS7_3_2TotalAnnotation Description
PFAMs
5,7036,3375,9276,6703,2606,9177,39842,212
37343842133842244ATPase family associated with various cellular activities (AAA)
31425037174538260ABC transporter
44444424ATP synthase alpha/beta family, nucleotide-binding domain
1111116EGF-like domain
151615156151496Elongation factor Tu GTP binding domain
9161110811873Helix-loop-helix DNA-binding domain
49648536Hsp20/alpha crystallin family
687117847Hsp70 protein
8108838853KH domain
1111116SH2 domain
21362230142724174SH3 domain
11TNFR/NGFR cysteine-rich region
8861091051Actin
39272224222937200Ankyrin repeat
786717642ADP-ribosylation factor family
24235324172828197Eukaryotic aspartyl protease
333313319Cyclic nucleotide-binding domain
11Cytochrome b/b6/petB
11112129Cytochrome c
373719737Double-stranded RNA binding motif
1718241992515127EF hand
11211284Fe-4S binding domain
2111117Fibronectin type III domain
112Globin
412143962169Glutathione S-transferase, C-terminal domain
1312119Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
6879610753Homeodomain
111115Laminin EGF domain
22232213lactate/malate dehydrogenase, NAD binding domain
55545630Myosin head (motor domain)
1176911313065106155755Cytochrome P450
11918812015879147143954Protein kinase domain
121116125121785Pyridine nucleotide-disulphide oxidoreductase
2248282852722180Ras family
769111513970Response regulator receiver domain
14416319RNase H
63725969226860413RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
41216Reverse transcriptase (RNA-dependent DNA polymerase)
111115Copper/zinc superoxide dismutase (SODC)
233212215Iron/manganese superoxide dismutases, alpha-hairpin domain
35482123Subtilase family
4642474696635291Sugar (and other) transporter
10910151111066Thioredoxin
555625533Tubulin/FtsZ family, GTPase domain
11412211von Willebrand factor type A domain
10979527717612536654Zinc finger, C2H2 type
39542647155241274Zinc finger, C3HC4 type (RING finger)
9240713314660186628Zinc knuckle
122122313Protein-tyrosine phosphatase
514175745510473473short chain dehydrogenase
38265739314539275Zinc-binding dehydrogenase
556435432Thiolase, N-terminal domain
4322231127Beta-ketoacyl synthase, N-terminal domain
453333212Fe-2S iron-sulfur cluster binding domain
1121117Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
77777843Glutamine amidotransferase class-I
9999191056TCP-1/cpn60 chaperonin family
11ATP synthase A chain
384323326Glutamine synthetase, catalytic domain
1111116Triosephosphate isomerase
12161113791179E1-E2 ATPase
1423161832116111Core histone H2A/H2B/H3/H4
6789312651Alpha amylase, catalytic domain
435433426Phorbol esters/diacylglycerol binding domain (C1 domain)
33443320Bacterial transferase hexapeptide (six repeats)
566516332tRNA synthetases class I (I, L, M and V)
121614135181290Cyclin, N-terminal domain
1714927202327137Carboxylesterase family
43444423DNA polymerase family B
333333321ATP synthase subunit C
112171012144Peroxidase
123263421Beta-lactamase
345534428C-5 cytosine-specific DNA methylase
19301927142124154Calcineurin-like phosphoesterase
938111241461Cellulase (glycosyl hydrolase family 5)
456516633tRNA synthetases class II (D, K and N)
3335343383337213Mitochondrial carrier protein
7813135111471Aminotransferase class I and II
66575534Phosphoribosyl transferase domain
111114117141179Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
232222215Ribosomal protein S4/S9 N-terminal domain
222222113Ribosomal protein S12/S23
111115Chaperonin 10 Kd subunit
15151618101414102C2 domain
1720181441616105PH domain
678857748bZIP transcription factor
131619173161599Aldehyde dehydrogenase family
46673548287940343Fungal Zn(2)-Cys(6) binuclear cluster domain
21242323112225149Cytochrome b5-like Heme/Steroid binding domain
234211417Oxidoreductase molybdopterin binding domain
87138210856Oxidoreductase NAD-binding domain
20211222102122128SNF2 family N-terminal domain
232222215Ribosomal protein S7p/S5e
2021202152116124Ubiquitin-conjugating enzyme
955515535Isocitrate/isopropylmalate dehydrogenase
222212213Ribosomal Proteins L2, RNA binding domain
22322213Hsp90 protein
22232213Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
181515223Cysteine-rich secretory protein family
11212119Ribosomal protein S3, C-terminal domain
319325225Cupin
112Annexin
55Eukaryotic-type carbonic anhydrase
33Chalcone and stilbene synthases, N-terminal domain
3324133192-oxoacid dehydrogenases acyltransferase (catalytic domain)
315272424Catalase
11114Disintegrin
455525531Aminotransferase class-III
252232218Ribosomal protein S19
111115DNA gyrase B
23343318Thiamine pyrophosphate enzyme, central domain
343313320Lyase
13212110Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111116Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
1211117Indole-3-glycerol phosphate synthase
32122313Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
8101010910966Kinesin motor domain
29362230132729186DnaJ domain
121614145141489Proteasome subunit
378612229Major intrinsic protein
1111116ATP synthase
22323315Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
111115Profilin
212131212Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
121912175131593Ubiquitin family
334324524Cofilin/tropomyosin-type actin-binding protein
212211914-3-3 protein
2225314Alkaline phosphatase
1111217Zinc carboxypeptidase
40215343365644293Aldo/keto reductase family
101213134111275Myb-like DNA-binding domain
445538534Forkhead domain
1113Glycosyl hydrolases family 32 N-terminal domain
11122119Ribosomal protein L16p/L10e
1111127Ribosomal protein S14p/S29e
2531045332FKBP-type peptidyl-prolyl cis-trans isomerase
11114Glutathione peroxidase
222222113
5513637544Flavodoxin
11Protamine P1
1111116Calreticulin family
3249Common central domain of tyrosinase
33343824Aminotransferase class-V
21423113Ribonucleotide reductase, small chain
50664462156945351DEAD/DEAH box helicase
73995991319190534Helicase conserved C-terminal domain
1113Fructose-bisphosphate aldolase class-I
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
112132212Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11112118Ribosomal protein L5
54357529Pyridoxal-dependent decarboxylase conserved domain
333323320Citrate synthase, C-terminal domain
464514529GHMP kinases N terminal domain
65675635Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
8710748953Pyridoxal-phosphate dependent enzyme
171211158131591NUDIX domain
24235319pfkB family carbohydrate kinase
733673736Glycosyl hydrolases family 28
212222213Ribosomal protein L3
222232215Ribosomal protein L11, RNA binding domain
756928643Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
123Lipoxygenase
444414425ATP synthase alpha/beta chain, C terminal domain
444414526Calponin homology (CH) domain
54444627Glutamine amidotransferases class-II
221222213Ribosomal protein S15
32336623Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
122222213Ribosomal protein S2
132224216SRF-type transcription factor (DNA-binding and dimerisation domain)
712794121061GATA zinc finger
1922162091924129Amino acid permease
222222921Prolyl oligopeptidase family
11112118Ribosomal protein L30p/L7e
7689461151Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
46444426Aconitase family (aconitate hydratase)
26345121Glycosyl hydrolase family 10
1211218Glycosyl hydrolases family 17
212232113Ribosomal protein S5, N-terminal domain
22222111Nucleoside diphosphate kinase
13311211Tetraspanin family
212232113Ribosomal protein S10p/S20e
1132310Arrestin (or S-antigen), N-terminal domain
31111119Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
11131119SecY translocase
211116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
473436532Polyprenyl synthetase
22222212Hexokinase
785619945Dynamin family
1211117Transcription factor TFIID (or TATA-binding protein, TBP)
44332420Rieske [2Fe-2S] domain
11Proton-conducting membrane transporter
7881319854Biotin-requiring enzyme
1111116Phosphofructokinase
222222214Ribosomal protein S17
1211117Hydroxymethylglutaryl-coenzyme A reductase
333323320FGGY family of carbohydrate kinases, N-terminal domain
7881039853Enoyl-CoA hydratase/isomerase
211222212Ribosomal protein S9/S16
32222213Transcription factor TFIIB repeat
665845640Cytidine and deoxycytidylate deaminase zinc-binding region
1111116Molybdopterin oxidoreductase
65612451129Chromo (CHRromatin Organisation MOdifier) domain
13133213Phosphatidylinositol-specific phospholipase C, Y domain
13145216Phosphatidylinositol-specific phospholipase C, X domain
646546637D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
353323322Malic enzyme, N-terminal domain
11222196-phosphogluconate dehydrogenase, C-terminal domain
17151266653Multicopper oxidase
876748848WW domain
221212212Ribosomal RNA adenine dimethylase
12312911613658127128817WD domain, G-beta repeat
424344324Heavy-metal-associated domain
63333321Adenylate kinase
22222212Phosphoglucomutase/phosphomannomutase, C-terminal domain
22151112Ribosomal protein S8
121221211Ribosomal protein S11
565554434LIM domain
233313217Regulator of chromosome condensation (RCC1) repeat
222222113Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22222212chorismate binding enzyme
33333311960s Acidic ribosomal protein
464514428Prenyltransferase and squalene oxidase repeat
454716633Protein kinase C terminal domain
111115Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
15111010611972Bromodomain
89911510961Acyl-CoA dehydrogenase, C-terminal domain
121414158151492Ubiquitin carboxyl-terminal hydrolase
1113Ribosomal protein L36
23241214Ribonuclease T2 family
144624324HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
11112219Urease alpha-subunit, N-terminal domain
9721112101272Serine carboxypeptidase
68798745Phosphatidylinositol 3- and 4-kinase
222213214Transketolase, thiamine diphosphate binding domain
1214Glycosyl hydrolases family 11
1113WHEP-TRS domain
222215216Inositol monophosphatase family
45334423Glutaredoxin
22222313Isocitrate lyase family
1111116Serine hydroxymethyltransferase
23324216Iron-containing alcohol dehydrogenase
223222215Ribosomal protein L10
5196867455KOW motif
1111116Ribosomal protein L34
322323318RF-1 domain
323211315Sodium:solute symporter family
111115Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111217Glucose-6-phosphate dehydrogenase, NAD binding domain
78594111054Protein phosphatase 2C
2111139Nucleotidyl transferase
44482426Carbonic anhydrase
1111116Phosphoribulokinase / Uridine kinase family
1186135131167Fatty acid desaturase
546696642MutS domain V
11112118Delta-aminolevulinic acid dehydratase
32354320Arginase family
656636638MCM P-loop domain
112116Squalene/phytoene synthase
8118748854FHA domain
2319302982543177AMP-binding enzyme
1245914181514127G-protein alpha subunit
16141514203014123HMG (high mobility group) box
11Haemagglutinin
3365910541His Kinase A (phospho-acceptor) domain
23224215Armadillo/beta-catenin-like repeat
27362320172532180Tetratricopeptide repeat
121222212Ion transport protein
111115DNA gyrase/topoisomerase IV, subunit A
686969953BRCA1 C Terminus (BRCT) domain
454514629Glycosyl transferases group 1
446425429Glycosyl transferase family 2
732416SAM domain (Sterile alpha motif)
24243318linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
28414Pectate lyase
111312211ribonuclease
11112219Urease, gamma subunit
333313319CoA-ligase
5465111950Phosphopantetheine attachment site
221332215Formyl transferase
99994101060Metallopeptidase family M24
1518142151612101Leucine Rich Repeat
16122329102434148alpha/beta hydrolase fold
23333317RNA polymerase Rpb2, domain 6
363315324PB1 domain
22222212Staphylococcal nuclease homologue
787710847Rab-GTPase-TBC domain
1111116Tudor domain
122221212WH1 domain
34433320Zinc finger, ZZ type
1111116HRDC domain
588517943CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
332433321S1 RNA binding domain
1113HIUase/Transthyretin family
45675431AhpC/TSA family
24444422tRNA synthetases class I (W and Y)
1111116UvrD/REP helicase N-terminal domain
44644527Rhodanese-like domain
221232214Universal stress protein family
18222427152626158Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
122222213AIR synthase related protein, N-terminal domain
666616637tRNA synthetase class II core domain (G, H, P, S and T)
13116Phage integrase family
232212214Tetrapyrrole (Corrin/Porphyrin) Methylases
1111116Glycosyl transferase family, a/b domain
211217Class II Aldolase and Adducin N-terminal domain
222314317Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
26235523Fes/CIP4, and EFC/F-BAR homology domain
36444324IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
324313420Phospholipase D Active site motif
12115Regulator of G protein signaling domain
434514425GTPase-activator protein for Ras-like GTPase
666715637RasGEF domain
431313722RasGEF N-terminal motif
121011128121176RhoGAP domain
9118115101064RhoGEF domain
344334425SPRY domain
33343319RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
44423522Gelsolin repeat
497627843UBA/TS-N domain
1216111410151997PHD-finger
112GGL domain
56456531HECT-domain (ubiquitin-transferase)
134224117Helix-hairpin-helix motif
12132110MSP (Major sperm protein) domain
572735736Ribonuclease III domain
22222212Region in Clathrin and VPS
233313217RanBP1 domain
222222214PPIC-type PPIASE domain
24123113Zn-finger in Ran binding protein and others
1526182392416131Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11114B-box zinc finger
11121823Poly(ADP-ribose) polymerase catalytic domain
11111128Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
6418010015713029044965F-box domain
111115Elongation factor 1 gamma, conserved domain
151119Calpain family cysteine protease
223253219Copper fist DNA binding domain
666625536CRAL/TRIO domain
104762161973BTB/POZ domain
1114231315269Ricin-type beta-trefoil lectin domain
11112118Inhibitor of Apoptosis domain
33223215Voltage gated chloride channel
3112879545Caspase domain
8261036540GDSL-like Lipase/Acylhydrolase
1111217Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
1117201572317110ABC transporter transmembrane region
431623Integrase core domain
438423327FAD binding domain
317920Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111321110HAMP domain
11112118ribosomal L5P family C-terminus
55655632Insulinase (Peptidase family M16)
45444324Dehydrogenase E1 component
11111117Lumazine binding domain
697637644Elongation factor G C-terminus
544424427HMGL-like
44534424DnaJ central domain
312321214Starch binding domain
122233114Ribosomal protein L1p/L10e family
554714531Cation transporting ATPase, C-terminus
6114835643Cation transporter/ATPase, N-terminus
126711173dUTPase
45444425Aconitase C-terminal domain
353413322Amino acid kinase family
1211117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
321344825Acyl transferase domain
11112219Urease beta subunit
31422214Dihydrodipicolinate synthetase family
2626252882830171haloacid dehalogenase-like hydrolase
211233214Glycosyl hydrolases family 2
91110121414878Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
112Acylphosphatase
1211117Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
342322319Peptidase S24-like
11111117Inorganic pyrophosphatase
453575231Glycosyl hydrolases family 16
422323218Glycosyl hydrolases family 15
1175129201175NADH:flavin oxidoreductase / NADH oxidase family
111111173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
313243218Glycosyl hydrolase family 20, catalytic domain
654555636HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
3193144172114167GMC oxidoreductase
1111138Asparagine synthase
13128344888Fungal cellulose binding domain
475617636Septin
1111116EF-1 guanine nucleotide exchange domain
1211117Homoserine dehydrogenase
33Flavin-binding monooxygenase-like
22233315tRNA synthetases class I (E and Q), catalytic domain
1212118tRNA synthetases class I (R)
5156626545XPG N-terminal domain
66795101053Metallo-beta-lactamase superfamily
11F5/8 type C domain
54544426Choline/Carnitine o-acyltransferase
1111217Putative esterase
1111116Glycosyl hydrolase family 9
111115Ferrochelatase
22232213Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333313319RNB domain
324327122Dioxygenase
15235521CNH domain
1111116Diacylglycerol kinase catalytic domain
8145128101067Dual specificity phosphatase, catalytic domain
111115MyTH4 domain
11
265334225P21-Rho-binding domain
91414112111475PX domain
122212313Ras association (RalGDS/AF-6) domain
464314426UBX domain
465515531VHS domain
1121117Phosphoinositide 3-kinase C2
222222214DAHP synthetase I family
634614428Carbon-nitrogen hydrolase
11N-acetyltransferase
123Geminivirus Rep catalytic domain
1111116Prephenate dehydratase
544433528Syntaxin
54565530Pumilio-family RNA binding repeat
555715533Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1211117Pterin binding enzyme
11111117ER lumen protein retaining receptor
221222213Glycoprotease family
1111116Histidinol dehydrogenase
333313319impB/mucB/samB family
11112118
11113119Ribosomal L15
11112118Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
111115Ribosomal prokaryotic L21 protein
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
111115Ribosomal S17
121116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
1716226Glycosyl hydrolase family 7
222133215RNA pseudouridylate synthase
568627842Histone deacetylase domain
1112319POT family
26221114PWWP domain
8195134131577SET domain
42835325Isochorismatase family
32222213Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
4357738569XPG I-region
111115Acetokinase family
1111116DNA photolyase
11Cation-independent mannose-6-phosphate receptor repeat
121141111Cytosol aminopeptidase family, catalytic domain
112Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
333323320Acyl CoA binding protein
36334726Cullin family
112Elongation factor TS
26243623FAD binding domain
8581577656O-methyltransferase domain
23222415EamA-like transporter family
223212214
888818849ThiF family
11111117Ribosomal family S4e
1211128Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
28233220Ammonium Transporter Family
35434322Sulfate permease family
1111116MATH domain
222212213Dehydratase family
23133315Transaldolase/Fructose-6-phosphate aldolase
33233115Mechanosensitive ion channel
1121117GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase