PFAM Domains • Corticiales
Annotations/GenomesCrudry1Galinc1Kurarg1Punst1Sisrad1Vuico1Vuicom1TotalAnnotation Description
PFAMs
10,94810,39310,0037,9089,77713,33213,28375,644
1127 transmembrane receptor (rhodopsin family)
45414141445049311ATPase family associated with various cellular activities (AAA)
46614343516972385ABC transporter
444544429ATP synthase alpha/beta family, nucleotide-binding domain
22EGF-like domain
16161414161515106Elongation factor Tu GTP binding domain
1312131112111284Helix-loop-helix DNA-binding domain
971088121266Hsp20/alpha crystallin family
1191099231687Hsp70 protein
778722101071KH domain
11SH2 domain
12131628151819121SH3 domain
1013151112111486Actin
936223172080Ankyrin repeat
11PAN domain
769879955ADP-ribosylation factor family
45765644235759360Eukaryotic aspartyl protease
333343322Cyclic nucleotide-binding domain
11111117Cytochrome c
1086699755Double-stranded RNA binding motif
1219224EF hand
114Fe-4S binding domain
1113Fibronectin type III domain
11114Globin
1215211832932130Glutathione S-transferase, C-terminal domain
11112219Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
12117811101069Homeodomain
222223316lactate/malate dehydrogenase, NAD binding domain
767555540Myosin head (motor domain)
196114951381012382451,127Cytochrome P450
1622512332142004014141,875Protein kinase domain
151291511151592Pyridine nucleotide-disulphide oxidoreductase
33362726323030214Ras family
9191121111922112Response regulator receiver domain
71871143425106RNase H
70576964596867454RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
33Retroviral aspartyl protease
1112229Copper/zinc superoxide dismutase (SODC)
322222316Iron/manganese superoxide dismutases, alpha-hairpin domain
1120364242030145Subtilase family
44413530404343276Sugar (and other) transporter
111221912101186Thioredoxin
554685538Tubulin/FtsZ family, GTPase domain
112von Willebrand factor type A domain
33142366215249258Zinc finger, C2H2 type
1414155771615138Zinc finger, C3HC4 type (RING finger)
1618927111311105Zinc knuckle
242244422Protein-tyrosine phosphatase
135986598105186185872short chain dehydrogenase
65473351336360352Zinc-binding dehydrogenase
445545532Thiolase, N-terminal domain
101362151552Beta-ketoacyl synthase, N-terminal domain
1113211102Fe-2S iron-sulfur cluster binding domain
21111118Enolase, C-terminal TIM barrel domain
1189798860Glutamine amidotransferase class-I
1110101011151582TCP-1/cpn60 chaperonin family
333324422Glutamine synthetase, catalytic domain
11111117Triosephosphate isomerase
21141510161617109E1-E2 ATPase
15132014201414110Core histone H2A/H2B/H3/H4
1113Copper binding proteins, plastocyanin/azurin family
81410910111173Alpha amylase, catalytic domain
556546637Phorbol esters/diacylglycerol binding domain (C1 domain)
634742228Bacterial transferase hexapeptide (six repeats)
444344427tRNA synthetases class I (I, L, M and V)
131010919181897Cyclin, N-terminal domain
13104125163131167Carboxylesterase family
444444428DNA polymerase family B
343343323ATP synthase subunit C
1119132212077Peroxidase
4484131245Beta-lactamase
442447732C-5 cytosine-specific DNA methylase
29202225212327167Calcineurin-like phosphoesterase
1820199242525140Cellulase (glycosyl hydrolase family 5)
785666644tRNA synthetases class II (D, K and N)
39383338414941279Mitochondrial carrier protein
11recA bacterial DNA recombination protein
15201416172119122Aminotransferase class I and II
344544428Phosphoribosyl transferase domain
15171413151414102Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
21112119Phosphoglycerate kinase
322222215Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
11Bacterial regulatory helix-turn-helix proteins, AraC family
21211119Chaperonin 10 Kd subunit
15151318131617107C2 domain
128921108876PH domain
979611111467bZIP transcription factor
18131615142220118Aldehyde dehydrogenase family
64816255698178490Fungal Zn(2)-Cys(6) binuclear cluster domain
21222121282223158Cytochrome b5-like Heme/Steroid binding domain
431423320Oxidoreductase molybdopterin binding domain
121091189867Oxidoreductase NAD-binding domain
37321923253835209SNF2 family N-terminal domain
222227825Ribosomal protein S7p/S5e
29231919272222161Ubiquitin-conjugating enzyme
556555536Isocitrate/isopropylmalate dehydrogenase
222232215Ribosomal Proteins L2, RNA binding domain
222223215Hsp90 protein
222222214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
123Chitin recognition protein
214131113Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
3423452344Cupin
11Annexin
11Chalcone and stilbene synthases, N-terminal domain
3334344242-oxoacid dehydrogenases acyltransferase (catalytic domain)
311272319Catalase
11111117Disintegrin
411293433UDP-glucoronosyl and UDP-glucosyl transferase
655676641Aminotransferase class-III
222222214Ribosomal protein S19
21111118DNA gyrase B
423343322Thiamine pyrophosphate enzyme, central domain
333444425Lyase
161223318Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
21111118Adenylate and Guanylate cyclase catalytic domain
11112118ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
11ATP:guanido phosphotransferase, C-terminal catalytic domain
211313415Indole-3-glycerol phosphate synthase
21111131534Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
101391116131486Kinesin motor domain
38342728263030213DnaJ domain
15171414181515108Proteasome subunit
854486641Major intrinsic protein
11111117ATP synthase
212122212Glycosyl hydrolase family 1
211111183'5'-cyclic nucleotide phosphodiesterase
11311119Profilin
222222214Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
16192012161919121Ubiquitin family
558555538Cofilin/tropomyosin-type actin-binding protein
21212111014-3-3 protein
22Alkaline phosphatase
11111117Zinc carboxypeptidase
72523054248083395Aldo/keto reductase family
71071277757Myb-like DNA-binding domain
5665691148Forkhead domain
111115Glycosyl hydrolases family 32 N-terminal domain
32222213Ribosomal protein L16p/L10e
222122213Ribosomal protein S14p/S29e
1728394447FKBP-type peptidyl-prolyl cis-trans isomerase
11112118Glutathione peroxidase
22
11Dehydrin
685775543Flavodoxin
11111117Calreticulin family
13104422Common central domain of tyrosinase
8715578858Aminotransferase class-V
29211141847Ribonucleotide reductase, small chain
81646550598280481DEAD/DEAH box helicase
11199858788107111688Helicase conserved C-terminal domain
11Fructose-bisphosphate aldolase class-I
21111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
214111111Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111117Ribosomal protein L5
963498746Pyridoxal-dependent decarboxylase conserved domain
543344427Citrate synthase, C-terminal domain
556555536GHMP kinases N terminal domain
656656640Biotin carboxylase, N-terminal domain
11112118Tryptophan synthase alpha chain
1287813111170Pyridoxal-phosphate dependent enzyme
16151414121617104NUDIX domain
467445535pfkB family carbohydrate kinase
4125135141467Glycosyl hydrolases family 28
222222214Ribosomal protein L3
222122213Ribosomal protein L11, RNA binding domain
91016109121177Histidine phosphatase superfamily (branch 1)
21111118Thymidylate synthase
444444428ATP synthase alpha/beta chain, C terminal domain
535454430Calponin homology (CH) domain
223433320Glutamine amidotransferases class-II
322222215Ribosomal protein S15
391467939Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
611222216Ribonucleotide reductase, all-alpha domain
222122213Ribosomal protein S2
243524424SRF-type transcription factor (DNA-binding and dimerisation domain)
111010129121276GATA zinc finger
41082211121279Amino acid permease
10710457750Prolyl oligopeptidase family
222222214Ribosomal protein L30p/L7e
81416119151386Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
444454429Aconitase family (aconitate hydratase)
355554532Glycosyl hydrolase family 10
111141110Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
212222213Nucleoside diphosphate kinase
422223621Tetraspanin family
1212Galactoside-binding lectin
222123214Ribosomal protein S10p/S20e
422954329Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11112118Carbohydrate phosphorylase
31111119SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222232215Ribosomal protein L6
324466631Polyprenyl synthetase
322223317Hexokinase
1514208121815102Dynamin family
1111127Transcription factor TFIID (or TATA-binding protein, TBP)
333433322Rieske [2Fe-2S] domain
12112119Phytochrome region
11Proton-conducting membrane transporter
879978856Biotin-requiring enzyme
11111117Phosphofructokinase
222222214Ribosomal protein S17
611121113Hydroxymethylglutaryl-coenzyme A reductase
333443323FGGY family of carbohydrate kinases, N-terminal domain
7986117755Enoyl-CoA hydratase/isomerase
122232214Ribosomal protein S9/S16
332122215Transcription factor TFIIB repeat
978658851Cytidine and deoxycytidylate deaminase zinc-binding region
11111117Molybdopterin oxidoreductase
661215510862Chromo (CHRromatin Organisation MOdifier) domain
122222213Phosphatidylinositol-specific phospholipase C, Y domain
123242216Phosphatidylinositol-specific phospholipase C, X domain
946565540D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
323212215Malic enzyme, N-terminal domain
4111122126-phosphogluconate dehydrogenase, C-terminal domain
10311135181878Multicopper oxidase
128111078864WW domain
222252217Ribosomal RNA adenine dimethylase
1681341341721381481501,044WD domain, G-beta repeat
533343324Heavy-metal-associated domain
534333324Adenylate kinase
222222214Phosphoglucomutase/phosphomannomutase, C-terminal domain
222122213Ribosomal protein S8
321222214Ribosomal protein S11
766676644LIM domain
436465533Regulator of chromosome condensation (RCC1) repeat
222122213Ribosomal protein S13/S18
222121111chorismate binding enzyme
53423332360s Acidic ribosomal protein
434485533Prenyltransferase and squalene oxidase repeat
554675537Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
11101071110968Bromodomain
91297129967Acyl-CoA dehydrogenase, C-terminal domain
24181514181515119Ubiquitin carboxyl-terminal hydrolase
11114Ribosomal protein L36
233424422Ribonuclease T2 family
444454429HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
11111319Urease alpha-subunit, N-terminal domain
15183122102926151Serine carboxypeptidase
888889958Phosphatidylinositol 3- and 4-kinase
221222213Transketolase, thiamine diphosphate binding domain
511119Glycosyl hydrolases family 11
1113WHEP-TRS domain
224221114Inositol monophosphatase family
546543431Glutaredoxin
332432219Isocitrate lyase family
11111117Serine hydroxymethyltransferase
523223320Iron-containing alcohol dehydrogenase
222222214Ribosomal protein L10
636544432KOW motif
21211119Ribosomal protein L34
1111116Ribosomal protein L33
443234424RF-1 domain
511315521Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
11111128DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
7871369959Protein phosphatase 2C
532223320Nucleotidyl transferase
358634433Carbonic anhydrase
11111117Phosphoribulokinase / Uridine kinase family
1075915111067Fatty acid desaturase
766656642MutS domain V
11111117Delta-aminolevulinic acid dehydratase
444525529Arginase family
666666642MCM P-loop domain
232123316Squalene/phytoene synthase
11111089161681FHA domain
32212829294346228AMP-binding enzyme
42181114101617128G-protein alpha subunit
13141313102127111HMG (high mobility group) box
6157167141479His Kinase A (phospho-acceptor) domain
436433326Armadillo/beta-catenin-like repeat
16181834161415131Tetratricopeptide repeat
453233323Ion transport protein
21111118DNA gyrase/topoisomerase IV, subunit A
6671169954BRCA1 C Terminus (BRCT) domain
465868845Glycosyl transferases group 1
332425625Glycosyl transferase family 2
1111116SAM domain (Sterile alpha motif)
334332220linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
32229Pectate lyase
122222213ribonuclease
11111319Urease, gamma subunit
333233320CoA-ligase
1458943030100Phosphopantetheine attachment site
232222215Formyl transferase
1210101116121384Metallopeptidase family M24
3121511124Leucine Rich Repeat
1291744131816129alpha/beta hydrolase fold
533343324RNA polymerase Rpb2, domain 6
66575111151PB1 domain
423222217Staphylococcal nuclease homologue
1212121113121284Rab-GTPase-TBC domain
11112118Tudor domain
21211119WH1 domain
35377141251Zinc finger, ZZ type
311112110HRDC domain
767766645CBS domain
322222215Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11112118Clp protease
543545531S1 RNA binding domain
11121118HIUase/Transthyretin family
453454429AhpC/TSA family
444444630tRNA synthetases class I (W and Y)
121223314UvrD/REP helicase N-terminal domain
887489953Rhodanese-like domain
222212213Universal stress protein family
27171630163029165Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
322222215AIR synthase related protein, N-terminal domain
655657640tRNA synthetase class II core domain (G, H, P, S and T)
33Phage integrase family
222222214Tetrapyrrole (Corrin/Porphyrin) Methylases
21211119Glycosyl transferase family, a/b domain
113223315Class II Aldolase and Adducin N-terminal domain
343344425Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
656545536Fes/CIP4, and EFC/F-BAR homology domain
222422216IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
212332215Phospholipase D Active site motif
444147832Regulator of G protein signaling domain
744454432GTPase-activator protein for Ras-like GTPase
5148912111271RasGEF domain
39611107753RasGEF N-terminal motif
1718141110141498RhoGAP domain
15151914141716110RhoGEF domain
435434427SPRY domain
433333322RNA polymerase Rpb1, domain 2
11111117Guanylate kinase
633424426Gelsolin repeat
896976651UBA/TS-N domain
15171517161517112PHD-finger
222113314GGL domain
566444433HECT-domain (ubiquitin-transferase)
311121110Helix-hairpin-helix motif
222121111MSP (Major sperm protein) domain
443746735Ribonuclease III domain
434245527Region in Clathrin and VPS
433233321RanBP1 domain
311222314PPIC-type PPIASE domain
1131118Zn-finger in Ran binding protein and others
121192214141496Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1111127B-box zinc finger
11830219970Poly(ADP-ribose) polymerase catalytic domain
221125518Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
34505771245653345F-box domain
11131119Elongation factor 1 gamma, conserved domain
141326724Calpain family cysteine protease
252132217Copper fist DNA binding domain
986777751CRAL/TRIO domain
7195372218130131504BTB/POZ domain
1346620Ricin-type beta-trefoil lectin domain
21111118Inhibitor of Apoptosis domain
333233320Voltage gated chloride channel
1015561171771Caspase domain
555128131361GDSL-like Lipase/Acylhydrolase
221121110Poly-adenylate binding protein, unique domain
11111117POLO box duplicated region
25352426264545226ABC transporter transmembrane region
1010Integrase core domain
655565537FAD binding domain
15111110Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111117HAMP domain
222222214ribosomal L5P family C-terminus
755557842Insulinase (Peptidase family M16)
544455532Dehydrogenase E1 component
21111118Lumazine binding domain
666676643Elongation factor G C-terminus
444346631HMGL-like
544444429DnaJ central domain
223415522Starch binding domain
333233320Ribosomal protein L1p/L10e family
846455537Cation transporting ATPase, C-terminus
1057668850Cation transporter/ATPase, N-terminus
11112118dUTPase
444454429Aconitase C-terminal domain
543343325Amino acid kinase family
21111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
91365141452Acyl transferase domain
11111319Urease beta subunit
422232217Dihydrodipicolinate synthetase family
18101227131516111haloacid dehalogenase-like hydrolase
312222214Glycosyl hydrolases family 2
101081012191887Glycosyl hydrolases family 18
11211118Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
113117Acylphosphatase
11111117Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
333125421Peptidase S24-like
11111117Inorganic pyrophosphatase
121618511171998Glycosyl hydrolases family 16
343426628Glycosyl hydrolases family 15
1518101312131596NADH:flavin oxidoreductase / NADH oxidase family
112111183-hydroxyacyl-CoA dehydrogenase, C-terminal domain
413614423Glycosyl hydrolase family 20, catalytic domain
954546639HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
17141723183942170GMC oxidoreductase
222232215Asparagine synthase
712821272731205Fungal cellulose binding domain
776657644Septin
11112118EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
495393437Flavin-binding monooxygenase-like
443337630tRNA synthetases class I (E and Q), catalytic domain
111123312tRNA synthetases class I (R)
956555540XPG N-terminal domain
967147151775Metallo-beta-lactamase superfamily
1124F5/8 type C domain
945454435Choline/Carnitine o-acyltransferase
11111117Putative esterase
11111117Glycosyl hydrolase family 9
11111117Ferrochelatase
222222214Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11111117Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
11Ezrin/radixin/moesin family
233333320RNB domain
213515421Dioxygenase
688447744CNH domain
432122216Diacylglycerol kinase catalytic domain
191511119111187Dual specificity phosphatase, catalytic domain
11111117MyTH4 domain
324233320P21-Rho-binding domain
16141412151515101PX domain
232332217Ras association (RalGDS/AF-6) domain
664344431UBX domain
655555435VHS domain
11111117Phosphoinositide 3-kinase C2
762223325DAHP synthetase I family
564557739Carbon-nitrogen hydrolase
3115N-acetyltransferase
1111116Prephenate dehydratase
454424427Syntaxin
544445430Pumilio-family RNA binding repeat
87676131259Histone-like transcription factor (CBF/NF-Y) and archaeal histone
12111118Pterin binding enzyme
121234417ER lumen protein retaining receptor
222122213Glycoprotease family
11111117Histidinol dehydrogenase
443333323impB/mucB/samB family
11PMP-22/EMP/MP20/Claudin family
11
11111117Ribosomal L15
333133319Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal prokaryotic L21 protein
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
111115Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
73594432Glycosyl hydrolase family 7
11Ring hydroxylating alpha subunit (catalytic domain)
222347727RNA pseudouridylate synthase
86686121056Histone deacetylase domain
2122119POT family
222215317PWWP domain
19323415233235190SET domain
633755534Isochorismatase family
141222214Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
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