PFAM Domains • Lecanoromycetes
Annotations/GenomesClagr3Lobpul1LobpulAf1LobpulSc1LobpulSp1LobpulSw1Usnflo1Xanpa2TotalAnnotation Description
PFAMs
7,52710,90010,85510,91310,89810,91810,4247,13679,571
117 transmembrane receptor (Secretin family)
5055555355556550438ATPase family associated with various cellular activities (AAA)
3134333431343037264ABC transporter
4444444432ATP synthase alpha/beta family, nucleotide-binding domain
1416161616161514123Elongation factor Tu GTP binding domain
9887876558Helix-loop-helix DNA-binding domain
3333332222Hsp20/alpha crystallin family
71616161716127107Hsp70 protein
10777778962KH domain
112SH2 domain
2414141414141320127SH3 domain
111010101010101081Actin
195101114921171234277861Ankyrin repeat
11111117PAN domain
7777777756ADP-ribosylation factor family
1527252727272414186Eukaryotic aspartyl protease
4444444432Cyclic nucleotide-binding domain
111111118Cytochrome c
2222212114Double-stranded RNA binding motif
203333231754EF hand
2134Fe-4S binding domain
3126Fibronectin type III domain
11Globin
121099899975Glutathione S-transferase, C-terminal domain
111111118Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
5344443532Homeodomain
2222223217lactate/malate dehydrogenase, NAD binding domain
5555554539Myosin head (motor domain)
91205196197199197158981,341Cytochrome P450
1141721701661641691391141,208Protein kinase domain
131212121212121398Pyridine nucleotide-disulphide oxidoreductase
2625252525252622199Ras family
111212121212131296Response regulator receiver domain
4223334425RNase H
6050504848485367424RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Reverse transcriptase (RNA-dependent DNA polymerase)
3323323120Copper/zinc superoxide dismutase (SODC)
1222221113Iron/manganese superoxide dismutases, alpha-hairpin domain
81921221822133126Subtilase family
3533343634344132279Sugar (and other) transporter
88888810765Thioredoxin
4116Trypsin
3333333324Tubulin/FtsZ family, GTPase domain
3423222321von Willebrand factor type A domain
7030383234382349314Zinc finger, C2H2 type
412322334399Zinc finger, C3HC4 type (RING finger)
911161415132787Zinc knuckle
2333332221Protein-tyrosine phosphatase
90948891878911586740short chain dehydrogenase
5053515252527143424Zinc-binding dehydrogenase
5555555439Thiolase, N-terminal domain
3344394239416429331Beta-ketoacyl synthase, N-terminal domain
42222223192Fe-2S iron-sulfur cluster binding domain
111111118Enolase, C-terminal TIM barrel domain
8888888864Glutamine amidotransferase class-I
101010101010101080TCP-1/cpn60 chaperonin family
3444443228Glutamine synthetase, catalytic domain
2222222216Triosephosphate isomerase
1117171717172012128E1-E2 ATPase
98778710763Core histone H2A/H2B/H3/H4
4333337733Alpha amylase, catalytic domain
2222221215Phorbol esters/diacylglycerol binding domain (C1 domain)
7565657647Bacterial transferase hexapeptide (six repeats)
3555554436tRNA synthetases class I (I, L, M and V)
68888810460Cyclin, N-terminal domain
71615151615138105Carboxylesterase family
4444444432DNA polymerase family B
3333334426ATP synthase subunit C
1333333221Peroxidase
7888783857Beta-lactamase
2555654436C-5 cytosine-specific DNA methylase
2427252725252325201Calcineurin-like phosphoesterase
6989897864Cellulase (glycosyl hydrolase family 5)
6887888659tRNA synthetases class II (D, K and N)
3738373737373636295Mitochondrial carrier protein
112recA bacterial DNA recombination protein
1317161717161413123Aminotransferase class I and II
8444444638Phosphoribosyl transferase domain
81010101010101179Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
2122222215Ribosomal protein S4/S9 N-terminal domain
2222222216Ribosomal protein S12/S23
21111118Bacterial regulatory helix-turn-helix proteins, AraC family
111111118Chaperonin 10 Kd subunit
101010101010101282C2 domain
169999981584PH domain
9111212131313891bZIP transcription factor
1113131313151712107Aldehyde dehydrogenase family
106939496989311074764Fungal Zn(2)-Cys(6) binuclear cluster domain
1818181818181719144Cytochrome b5-like Heme/Steroid binding domain
4333333224Oxidoreductase molybdopterin binding domain
1077777111167Oxidoreductase NAD-binding domain
3435353535353324266SNF2 family N-terminal domain
2222222216Ribosomal protein S7p/S5e
2224252525252222190Ubiquitin-conjugating enzyme
6777777654Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
111111118Hsp90 protein
2222222216Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
4666566645Chitin recognition protein
1333334626Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
2444444329Cupin
2222222216Annexin
11Eukaryotic-type carbonic anhydrase
3216Chalcone and stilbene synthases, N-terminal domain
33333333242-oxoacid dehydrogenases acyltransferase (catalytic domain)
6555557240Catalase
111111118Disintegrin
444444125UDP-glucoronosyl and UDP-glucosyl transferase
7555558444Aminotransferase class-III
1222222215Ribosomal protein S19
111111118DNA gyrase B
6444447437Thiamine pyrophosphate enzyme, central domain
3333333324Lyase
2333332221Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11Sodium:neurotransmitter symporter family
111111118Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
1222221113Orotidine 5'-phosphate decarboxylase / HUMPS family
121111119Indole-3-glycerol phosphate synthase
39891283355Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
11101010101011981Kinesin motor domain
2730292928293128231DnaJ domain
1415151515151414117Proteasome subunit
7666667448Major intrinsic protein
111111118ATP synthase
1111111183'5'-cyclic nucleotide phosphodiesterase
111111118Profilin
1222221113Ribosomal protein L22p/L17e
2444442226Ribosomal protein L14p/L23e
61111111111111284Ubiquitin family
4444444432Cofilin/tropomyosin-type actin-binding protein
233333332314-3-3 protein
2222221518Alkaline phosphatase
1222221214Zinc carboxypeptidase
2128282827282618204Aldo/keto reductase family
13131112131191597Myb-like DNA-binding domain
4444444533Forkhead domain
1222221113Glycosyl hydrolases family 32 N-terminal domain
222222113Ribosomal protein L16p/L10e
1222222215Ribosomal protein S14p/S29e
4333333325FKBP-type peptidyl-prolyl cis-trans isomerase
111111118Glutathione peroxidase
325
7555558747Flavodoxin
111111118Calreticulin family
514141414142380Common central domain of tyrosinase
9898889766Aminotransferase class-V
111111118Ribonucleotide reductase, small chain
4558565252544541403DEAD/DEAH box helicase
8889949189958074700Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222216Ribosomal protein L23
1222222215Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2222222216Ribosomal protein L5
6777777755Pyridoxal-dependent decarboxylase conserved domain
4656659445Citrate synthase, C-terminal domain
5545445537GHMP kinases N terminal domain
6666666648Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
10999999973Pyridoxal-phosphate dependent enzyme
1413131313131612107NUDIX domain
4877776753pfkB family carbohydrate kinase
33Glycosyl hydrolases family 28
122222112Luciferase-like monooxygenase
2222222216Ribosomal protein L3
2222222216Ribosomal protein L11, RNA binding domain
1113131313131313102Histidine phosphatase superfamily (branch 1)
11Rubredoxin
111111118Thymidylate synthase
21111118Lipoxygenase
4444444432ATP synthase alpha/beta chain, C terminal domain
5555555540Calponin homology (CH) domain
5333332628Glutamine amidotransferases class-II
2222222216Ribosomal protein S15
224'Cold-shock' DNA-binding domain
111111118Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
2222222216Ribosomal protein S2
2222222216SRF-type transcription factor (DNA-binding and dimerisation domain)
7666678854GATA zinc finger
3311111111111137136Amino acid permease
3554449337Prolyl oligopeptidase family
2222221215Ribosomal protein L30p/L7e
7888886659Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4444444432Aconitase family (aconitate hydratase)
3333333627Glycosyl hydrolases family 17
2222222216Ribosomal protein S5, N-terminal domain
111111118Nucleoside diphosphate kinase
2222210Tetraspanin family
2222222216Ribosomal protein S10p/S20e
4443445230Arrestin (or S-antigen), N-terminal domain
111111118Phosphoglucose isomerase
111111118Carbohydrate phosphorylase
111111118SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
6897995760Polyprenyl synthetase
3333333425Hexokinase
7131313131312892Dynamin family
111111118Transcription factor TFIID (or TATA-binding protein, TBP)
4222222420Rieske [2Fe-2S] domain
1111116Phytochrome region
7777778858Biotin-requiring enzyme
1221121111Phosphofructokinase
1222221214Ribosomal protein S17
111111219Hydroxymethylglutaryl-coenzyme A reductase
3333333324FGGY family of carbohydrate kinases, N-terminal domain
8101111111111881Enoyl-CoA hydratase/isomerase
2222222216Ribosomal protein S9/S16
2222224218Transcription factor TFIIB repeat
5888887759Cytidine and deoxycytidylate deaminase zinc-binding region
111111118Molybdopterin oxidoreductase
4855666444Chromo (CHRromatin Organisation MOdifier) domain
2222222216Phosphatidylinositol-specific phospholipase C, Y domain
2333333323Phosphatidylinositol-specific phospholipase C, X domain
5666665545D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2222211113Malic enzyme, N-terminal domain
21111112106-phosphogluconate dehydrogenase, C-terminal domain
129999912271Multicopper oxidase
8111112121111985WW domain
1212212112Ribosomal RNA adenine dimethylase
411111817Yeast PIR protein repeat
106129129119117121107108936WD domain, G-beta repeat
4444445534Heavy-metal-associated domain
3444445432Adenylate kinase
3333333324Phosphoglucomutase/phosphomannomutase, C-terminal domain
2222222115Ribosomal protein S8
1222222215Ribosomal protein S11
5444444433LIM domain
333333220Regulator of chromosome condensation (RCC1) repeat
1222222215Ribosomal protein S13/S18
2222222216chorismate binding enzyme
323333332360s Acidic ribosomal protein
8333343532Prenyltransferase and squalene oxidase repeat
6444444737Protein kinase C terminal domain
111111118Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
7777777655Bromodomain
10777779963Acyl-CoA dehydrogenase, C-terminal domain
1415151515151514118Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
111111219Ribonuclease T2 family
3333333324HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
111111118Urease alpha-subunit, N-terminal domain
101414141514118100Serine carboxypeptidase
7777777756Phosphatidylinositol 3- and 4-kinase
111111118Transketolase, thiamine diphosphate binding domain
2333431221Inositol monophosphatase family
4444444432Glutaredoxin
3222222318Isocitrate lyase family
4333322222Serine hydroxymethyltransferase
3222222217Iron-containing alcohol dehydrogenase
1222222215Ribosomal protein L10
2111111210KOW motif
1111116Ribosomal protein L34
1111116Ribosomal protein L33
2444443328RF-1 domain
2333333222Sodium:solute symporter family
111111118Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
111111118IMP dehydrogenase / GMP reductase domain
2222222216Glucose-6-phosphate dehydrogenase, NAD binding domain
6666665748Protein phosphatase 2C
3332333323Nucleotidyl transferase
2222224319Carbonic anhydrase
1232232116Phosphoribulokinase / Uridine kinase family
5888886657Fatty acid desaturase
6666666648MutS domain V
111111118Delta-aminolevulinic acid dehydratase
4444443431Arginase family
6666666648MCM P-loop domain
2333333222Squalene/phytoene synthase
8101212111210984FHA domain
4552515252526146411AMP-binding enzyme
8666665548G-protein alpha subunit
8899998969HMG (high mobility group) box
79999910870His Kinase A (phospho-acceptor) domain
3444443329Armadillo/beta-catenin-like repeat
3016191814171323150Tetratricopeptide repeat
3333333324Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
10878772958BRCA1 C Terminus (BRCT) domain
6333335531Glycosyl transferases group 1
7222232929Glycosyl transferase family 2
4333332425SAM domain (Sterile alpha motif)
111111118linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
1222224116ribonuclease
111111118Urease, gamma subunit
4333334427CoA-ligase
2559525557548227411Phosphopantetheine attachment site
2222222216Formyl transferase
7777778858Metallopeptidase family M24
114444431246Leucine Rich Repeat
2987877934109alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
2344444227PB1 domain
2222222216Staphylococcal nuclease homologue
111212121312121296Rab-GTPase-TBC domain
111111118Tudor domain
111111118WH1 domain
6544545336Zinc finger, ZZ type
2221212214HRDC domain
8888887863CBS domain
2222222216Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
4444444331S1 RNA binding domain
111111118HIUase/Transthyretin family
3222224320AhpC/TSA family
4656655441tRNA synthetases class I (W and Y)
1222222215UvrD/REP helicase N-terminal domain
4777776449Rhodanese-like domain
3222222217Universal stress protein family
2716151616162332161Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
8777777858tRNA synthetase class II core domain (G, H, P, S and T)
111111118SpoU rRNA Methylase family
2222222216Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
2114PDZ domain
3333335225Class II Aldolase and Adducin N-terminal domain
11Influenza non-structural protein (NS1)
4444444432Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
4555555539Fes/CIP4, and EFC/F-BAR homology domain
5333331526IQ calmodulin-binding motif
2222222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
6222222422Phospholipase D Active site motif
1777775142Regulator of G protein signaling domain
3333333324GTPase-activator protein for Ras-like GTPase
4444444432RasGEF domain
4444444432RasGEF N-terminal motif
10999999872RhoGAP domain
6677776652RhoGEF domain
6787777554SPRY domain
3333333324RNA polymerase Rpb1, domain 2
111111118Guanylate kinase
3333333324Gelsolin repeat
10345544944UBA/TS-N domain
1714131314131318115PHD-finger
111111118GGL domain
6666666648HECT-domain (ubiquitin-transferase)
2111111210Helix-hairpin-helix motif
111111118MSP (Major sperm protein) domain
7444443838Ribonuclease III domain
2444445330Region in Clathrin and VPS
3333333324RanBP1 domain
2222222216PPIC-type PPIASE domain
4222223320Zn-finger in Ran binding protein and others
167876681775Zinc finger C-x8-C-x5-C-x3-H type (and similar)
3122225219Poly(ADP-ribose) polymerase catalytic domain
111111118Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
5918171718161756218F-box domain
111111118Elongation factor 1 gamma, conserved domain
2222223318Calpain family cysteine protease
2222222216Copper fist DNA binding domain
6444447538CRAL/TRIO domain
1128302928293417206BTB/POZ domain
1111127Ricin-type beta-trefoil lectin domain
2111112211Inhibitor of Apoptosis domain
4444444432Voltage gated chloride channel
4414252325Caspase domain
6333333731GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
11POLO box duplicated region
1312121212121316102ABC transporter transmembrane region
11Integrase core domain
4444446535FAD binding domain
615151515161812112Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111111118HAMP domain
2222222216ribosomal L5P family C-terminus
5666666546Insulinase (Peptidase family M16)
3333333324Dehydrogenase E1 component
111111118Lumazine binding domain
6666666648Elongation factor G C-terminus
4555554437HMGL-like
4444444432DnaJ central domain
11Sulfotransferase domain
111111118Starch binding domain
2333333222Ribosomal protein L1p/L10e family
5555555641Cation transporting ATPase, C-terminus
57777710757Cation transporter/ATPase, N-terminus
11111218dUTPase
4444444432Aconitase C-terminal domain
3444444431Amino acid kinase family
121111119N-(5'phosphoribosyl)anthranilate (PRA) isomerase
2943394140396427322Acyl transferase domain
111111118Urease beta subunit
1111112311Dihydrodipicolinate synthetase family
3014141414141428142haloacid dehalogenase-like hydrolase
333333321Glycosyl hydrolases family 2
8111111101110678Glycosyl hydrolases family 18
111111118Proliferating cell nuclear antigen, N-terminal domain
22222111Translation initiation factor IF-3, C-terminal domain
11111117Acylphosphatase
111111118Adenylosuccinate synthetase
111111118Asparaginase, N-terminal
2333333222Peptidase S24-like
111111118Inorganic pyrophosphatase
866666111160Glycosyl hydrolases family 16
111111118Glycosyl hydrolases family 15
2222225219NADH:flavin oxidoreductase / NADH oxidase family
211