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PFAM Domains • Pichia pastoris
Annotations/GenomesAscru1Babin1Canar1Canca1Canta1Cante1Cybja1Dekbr2Hanpo2Hanva1_1Hypbu1Lipst1_1Metbi1Nadfu1Pacta1_2Picme2Picpa1Picst3Sacce1Spapa3Wican1TotalAnnotation Description
PFAMs
5,3295,4665,1224,4745,1425,0505,4874,9105,0063,7425,3496,3674,8895,3245,2224,8884,7864,5715,5355,2595,807107,725
313333303334333232303335343734323128333333684ATPase family associated with various cellular activities (AAA)
303028252524282422292956222628302731313136612ABC transporter
44444444444444444444484ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
171314121413141414121414141415141214161414292Elongation factor Tu GTP binding domain
1310107989108699789101077810184Helix-loop-helix DNA-binding domain
412124422224Hsp20/alpha crystallin family
10997999998979109981214910194Hsp70 protein
8208567878579799868888169KH domain
111111111111111116SH2 domain
222018162319211717162321232120182122221921420SH3 domain
10111081191110107101011111099891011205Actin
121315101513121512121716131514131414181616295Ankyrin repeat
776766666577678567776135ADP-ribosylation factor family
1112941281355810896988971412187Eukaryotic aspartyl protease
23344334313444343433368Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
1113Cytochrome b/b6/petB
21111112111112111121125Cytochrome c
52312121212312222123545Double-stranded RNA binding motif
20131114109141114101315101512101213111111259EF hand
1111111311111121111224Fe-4S binding domain
2111211221216Fibronectin type III domain
772212312212322228253Globin
9852461066257345872668119Glutathione S-transferase, C-terminal domain
21111222112112211431234Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
53324343534636544385487Homeodomain
112Laminin EGF domain
43323333313232332333358lactate/malate dehydrogenase, NAD binding domain
3323222331525323353156Myosin head (motor domain)
446591154559216455410395139Cytochrome P450
1029710179958996949787958695989696899511493971,991Protein kinase domain
7775571251077107977118959161Pyridine nucleotide-disulphide oxidoreductase
352121192020231822122023212424192023242021450Ras family
446476735477797556489124Response regulator receiver domain
1411132111111111123RNase H
5152524045405753523347624158494648474846591,026RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
112Retroviral aspartyl protease
123Reverse transcriptase (RNA-dependent DNA polymerase)
21313322212121222313241Copper/zinc superoxide dismutase (SODC)
11112131112111111212228Iron/manganese superoxide dismutases, alpha-hairpin domain
10446446444654554544125109Subtilase family
832301024392928321632103201425141760342539631Sugar (and other) transporter
998798109868899778910810176Thioredoxin
311112112111111221Trypsin
43353333323534534343372Tubulin/FtsZ family, GTPase domain
1113von Willebrand factor type A domain
373941303838323334293841364133333249383339764Zinc finger, C2H2 type
303626303128322826223534283131303524223337629Zinc finger, C3HC4 type (RING finger)
41834248212923435567487Zinc knuckle
63223432223232323234359Protein-tyrosine phosphatase
16321720224225152573180172026171831133340547short chain dehydrogenase
21271623171723161952340201519161024171829415Zinc-binding dehydrogenase
37332222212523322424561Thiolase, N-terminal domain
22222222232522222222246Beta-ketoacyl synthase, N-terminal domain
343333333333333343233642Fe-2S iron-sulfur cluster binding domain
21111121113111311151232Enolase, C-terminal TIM barrel domain
13217Cytochrome C and Quinol oxidase polypeptide I
11114Cytochrome C oxidase subunit II, periplasmic domain
877777977678788887987157Glutamine amidotransferase class-I
1110109910119101111910101010910101011210TCP-1/cpn60 chaperonin family
11ATP synthase A chain
11121111111112111111123Glutamine synthetase, catalytic domain
11111111111311111111123Triosephosphate isomerase
128981010129881017101179811121013212E1-E2 ATPase
141010511111010961179131110611101110205Core histone H2A/H2B/H3/H4
14113326213192411683475Alpha amylase, catalytic domain
21121111111211131111126Phorbol esters/diacylglycerol binding domain (C1 domain)
555455556256463555487105Bacterial transferase hexapeptide (six repeats)
43343332433334433733371tRNA synthetases class I (I, L, M and V)
11111061110111010811711101171011131211212Cyclin, N-terminal domain
12111732431Carboxylesterase family
44444444444444444444484DNA polymerase family B
34333333333433433333366ATP synthase subunit C
2221111221222222212133Peroxidase
1113111121121118Beta-lactamase
11114NADH dehydrogenase
192021151819212021121829181818201618211821401Calcineurin-like phosphoesterase
3421352113333214443355Cellulase (glycosyl hydrolase family 5)
666666666566666566666124tRNA synthetases class II (D, K and N)
343532333433393131253335333833303434343335699Mitochondrial carrier protein
151513111415151211101411131112101110111314261Aminotransferase class I and II
1088688888788810108881188174Phosphoribosyl transferase domain
61084969108499812116588811169Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111121111111111122Phosphoglycerate kinase
22212222222223222232243Ribosomal protein S4/S9 N-terminal domain
22222222222223222232244Ribosomal protein S12/S23
112217Bacterial regulatory helix-turn-helix proteins, AraC family
11211111211112111111124Chaperonin 10 Kd subunit
101096101087115108109968911911186C2 domain
12141314141315121371714131517121215241218296PH domain
646366536147587565854110bZIP transcription factor
10121010910141011711119910109109915215Aldehyde dehydrogenase family
61547043668682627334771255539598054855359931,410Fungal Zn(2)-Cys(6) binuclear cluster domain
1716131214161415149141914131612111471313286Cytochrome b5-like Heme/Steroid binding domain
112116Oxidoreductase molybdopterin binding domain
5777761299688678877879158Oxidoreductase NAD-binding domain
191818171818191916181819181818191918171719380SNF2 family N-terminal domain
22222223212223222222243Ribosomal protein S7p/S5e
131514151313161414121321131515141413141316300Ubiquitin-conjugating enzyme
966566666566666666766128Isocitrate/isopropylmalate dehydrogenase
22323322213233233333252Ribosomal Proteins L2, RNA binding domain
11111111111112111121123Hsp90 protein
22222222213222222222242Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111111111111121Dihydrofolate reductase
1214Chitin recognition protein
4724443223423222339368Cysteine-rich secretory protein family
11111111111111111111121Ribosomal protein S3, C-terminal domain
11Cupin
112Annexin
1113Trypsin and protease inhibitor
222322222222232222222442-oxoacid dehydrogenases acyltransferase (catalytic domain)
12122221112612211121236Catalase
112Disintegrin
11114UDP-glucoronosyl and UDP-glucosyl transferase
6410347858684584947458127Aminotransferase class-III
21222222122213222222240Ribosomal protein S19
11111111111111111111121DNA gyrase B
26654354553524445373489Thiamine pyrophosphate enzyme, central domain
44434333334333433434371Lyase
22222222212222222232242Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
21121111111112111111124Adenylate and Guanylate cyclase catalytic domain
11111111111112111111122ATP synthase delta (OSCP) subunit
11111111111111111111121Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111121111111111122Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
21111111111112111121124Pyruvate kinase, barrel domain
7898667483766108476668140Kinesin motor domain
242324212321242323142324242524232324212325479DnaJ domain
141414141414141413141414131414141414141414292Proteasome subunit
2311112113121312141234Major intrinsic protein
11111111111111111111121ATP synthase
1113Glycosyl hydrolase family 1
111111111111111111111213'5'-cyclic nucleotide phosphodiesterase
1111111111111111111120Profilin
22112221211112112121130Ribosomal protein L22p/L17e
22211222222222222232241Ribosomal protein L14p/L23e
95687787747117117766978154Ubiquitin family
44324444424442443334575Cofilin/tropomyosin-type actin-binding protein
1112111111121211112112514-3-3 protein
11121232211311111211332Alkaline phosphatase
1111111111111111111120Zinc carboxypeptidase
101915613171513161016411081317717161824321Aldo/keto reductase family
151313111310131414111313121414131212151214271Myb-like DNA-binding domain
23333333233333233344463Forkhead domain
11381216Glycosyl hydrolases family 32 N-terminal domain
111111111111111111119Ribosomal protein L16p/L10e
22222222222223222132243Ribosomal protein S14p/S29e
53333232333333333343364FKBP-type peptidyl-prolyl cis-trans isomerase
41112211122122211232236Glutathione peroxidase
1212111111211111121225
8666788774710678848767145Flavodoxin
1111112111112111111122Calreticulin family
48564545525644455334697Aminotransferase class-V
11111111111111111121122Ribonucleotide reductase, small chain
353133303127333231333236323632333137563134706DEAD/DEAH box helicase
5858565359496056595356705459565859567959591,226Helicase conserved C-terminal domain
11111111111111111111121EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222212222222222241Ribosomal protein L23
1111111111111111111120Pyridoxal-dependent decarboxylase, C-terminal sheet domain
12211112111112222131231Ribosomal protein L5
43333333313623333323363Pyridoxal-dependent decarboxylase conserved domain
22121121111313111131232Citrate synthase, C-terminal domain
55455544345755544465599GHMP kinases N terminal domain
555756565556556655756115Biotin carboxylase, N-terminal domain
11111111111111111111121Tryptophan synthase alpha chain
89578810566888867887811159Pyridoxal-phosphate dependent enzyme
7879889765898108768787160NUDIX domain
33343443424334335244371pfkB family carbohydrate kinase
112Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
22222222222222222222242Ribosomal protein L3
22222222222223222232244Ribosomal protein L11, RNA binding domain
1312121016151212127161112131212128121512256Histidine phosphatase superfamily (branch 1)
11111111111111111111121Thymidylate synthase
44444444444444444444484ATP synthase alpha/beta chain, C terminal domain
64545545414455545544391Calponin homology (CH) domain
544555454456564454754100Glutamine amidotransferases class-II
22222222232222522222246Ribosomal protein S15
2111111111111111111121Fructose-1-6-bisphosphatase, N-terminal domain
12212222212121222222237Ribonucleotide reductase, all-alpha domain
22222222222222212232242Ribosomal protein S2
12222332211222222241242SRF-type transcription factor (DNA-binding and dimerisation domain)
9875981188497710876910810168GATA zinc finger
46302714313040252923349262322301936242943590Amino acid permease
22222232222222222222344Prolyl oligopeptidase family
22323321323124333243253Ribosomal protein L30p/L7e
12434364456938433365692Histidine phosphatase superfamily (branch 2)
11111111111111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
54444444444444444544486Aconitase family (aconitate hydratase)
11Glycosyl hydrolase family 10
12224344322333453234362Glycosyl hydrolases family 17
22212222212222222222240Ribosomal protein S5, N-terminal domain
11111111111111111111121Nucleoside diphosphate kinase
21211122211112222121232Ribosomal protein S10p/S20e
4655334121663343232470Arrestin (or S-antigen), N-terminal domain
11111111111111111111121Phosphoglucose isomerase
111111111111111111119Carbohydrate phosphorylase
12212222112122221222236SecY translocase
11111111111111111118