PFAM Domains • Meliniomyces bicolor E v2.0
Annotations/GenomesAmore1Botci1Melbi2Melva1Oidma1Sclsc1TotalAnnotation Description
PFAMs
7,3267,96111,47113,38412,2697,95760,368
117 transmembrane receptor (rhodopsin family)
404675685939327ATPase family associated with various cellular activities (AAA)
365264717545343ABC transporter
44444424ATP synthase alpha/beta family, nucleotide-binding domain
14121414141482Elongation factor Tu GTP binding domain
109162015979Helix-loop-helix DNA-binding domain
22455220Hsp20/alpha crystallin family
88879747Hsp70 protein
81010128957KH domain
1111116SH2 domain
242329262323148SH3 domain
1071010101057Actin
326625520714847755Ankyrin repeat
3665424PAN domain
77777742ADP-ribosylation factor family
121624423210136Eukaryotic aspartyl protease
44444424Cyclic nucleotide-binding domain
11Cytochrome b/b6/petB
1111116Cytochrome c
2132210Double-stranded RNA binding motif
192017211820115EF hand
12111284Fe-4S binding domain
32233215Fibronectin type III domain
1113Globin
71521313312119Glutathione S-transferase, C-terminal domain
12231110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
778117747Homeodomain
22433216lactate/malate dehydrogenase, NAD binding domain
45465529Myosin head (motor domain)
6511416822117084822Cytochrome P450
12095180159128108790Protein kinase domain
141925372914138Pyridine nucleotide-disulphide oxidoreductase
232133303025162Ras family
162125301622130Response regulator receiver domain
3335968RNase H
635868685558370RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
197089Reverse transcriptase (RNA-dependent DNA polymerase)
1124Serpin (serine protease inhibitor)
12222211Copper/zinc superoxide dismutase (SODC)
21123110Iron/manganese superoxide dismutases, alpha-hairpin domain
24131713554Subtilase family
477013819015455654Sugar (and other) transporter
119141411968Thioredoxin
11223211Trypsin
45446427Tubulin/FtsZ family, GTPase domain
32964226von Willebrand factor type A domain
52501391459454534Zinc finger, C2H2 type
413759714839295Zinc finger, C3HC4 type (RING finger)
729564105Zinc knuckle
33223316Protein-tyrosine phosphatase
8010817526425679962short chain dehydrogenase
41599413313454515Zinc-binding dehydrogenase
65777537Thiolase, N-terminal domain
82232205022154Beta-ketoacyl synthase, N-terminal domain
548844332Fe-2S iron-sulfur cluster binding domain
112Papain family cysteine protease
12223111Enolase, C-terminal TIM barrel domain
78787845Glutamine amidotransferase class-I
10101010101060TCP-1/cpn60 chaperonin family
33565325Glutamine synthetase, catalytic domain
21222110Triosephosphate isomerase
14142319161298E1-E2 ATPase
89989851Core histone H2A/H2B/H3/H4
11125Copper binding proteins, plastocyanin/azurin family
487105943Alpha amylase, catalytic domain
22221211Phorbol esters/diacylglycerol binding domain (C1 domain)
88899749Bacterial transferase hexapeptide (six repeats)
35333421tRNA synthetases class I (I, L, M and V)
76677639Cyclin, N-terminal domain
113743626416233Carboxylesterase family
454417DNA polymerase family B
44665429ATP synthase subunit C
33555324Peroxidase
562526374103Beta-lactamase
46454528C-5 cytosine-specific DNA methylase
282435363020173Calcineurin-like phosphoesterase
8101927171394Cellulase (glycosyl hydrolase family 5)
77789745tRNA synthetases class II (D, K and N)
373541414236232Mitochondrial carrier protein
1113recA bacterial DNA recombination protein
142016202414108Aminotransferase class I and II
7911911855Phosphoribosyl transferase domain
10111010101061Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
211116Bacterial regulatory helix-turn-helix proteins, AraC family
1111116Chaperonin 10 Kd subunit
91014169866C2 domain
181519191717105PH domain
107111120867bZIP transcription factor
181526384513155Aldehyde dehydrogenase family
152109329554469931,706Fungal Zn(2)-Cys(6) binuclear cluster domain
221725263720147Cytochrome b5-like Heme/Steroid binding domain
22332214Oxidoreductase molybdopterin binding domain
16141718181194Oxidoreductase NAD-binding domain
242742383125187SNF2 family N-terminal domain
23222213Ribosomal protein S7p/S5e
201927252223136Ubiquitin-conjugating enzyme
66799542Isocitrate/isopropylmalate dehydrogenase
22221211Ribosomal Proteins L2, RNA binding domain
1111116Hsp90 protein
22223213Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
2221119Dihydrofolate reductase
35893735Chitin recognition protein
23462320Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
23455120Cupin
22222111Annexin
12115Eukaryotic-type carbonic anhydrase
1121117Chalcone and stilbene synthases, N-terminal domain
334333192-oxoacid dehydrogenases acyltransferase (catalytic domain)
3771111847Catalase
11226Disintegrin
147113UDP-glucoronosyl and UDP-glucosyl transferase
76131015657Aminotransferase class-III
22222212Ribosomal protein S19
1111116DNA gyrase B
4491014445Thiamine pyrophosphate enzyme, central domain
43545324Lyase
22333215Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1122219Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1112117Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
111137Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
8111211101062Kinesin motor domain
283135342832188DnaJ domain
14141414141484Proteasome subunit
31110136952Major intrinsic protein
1111116ATP synthase
254513332Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
111115Profilin
1111116Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
11131723121086Ubiquitin family
54554528Cofilin/tropomyosin-type actin-binding protein
2222311214-3-3 protein
22332214Alkaline phosphatase
13111310Zinc carboxypeptidase
223549656825264Aldo/keto reductase family
16151718171497Myb-like DNA-binding domain
44543424Forkhead domain
2344114Glycosyl hydrolases family 32 N-terminal domain
1111116Ribosomal protein L16p/L10e
22212211Ribosomal protein S14p/S29e
33453321FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
22221211
9881113655Flavodoxin
1111116Calreticulin family
4911177452Common central domain of tyrosinase
76111313959Aminotransferase class-V
1111116Ribonucleotide reductase, small chain
423942443740244DEAD/DEAH box helicase
766891928177485Helicase conserved C-terminal domain
121217EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212Ribosomal protein L23
1311118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
22222212Ribosomal protein L5
658813646Pyridoxal-dependent decarboxylase conserved domain
32323316Citrate synthase, C-terminal domain
55555530GHMP kinases N terminal domain
87797644Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
98111013859Pyridoxal-phosphate dependent enzyme
12112123171195NUDIX domain
54755430pfkB family carbohydrate kinase
3181622211797Glycosyl hydrolases family 28
113117Luciferase-like monooxygenase
22222212Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
151417221616100Histidine phosphatase superfamily (branch 1)
1111217Thymidylate synthase
3126Lipoxygenase
44444424ATP synthase alpha/beta chain, C terminal domain
54554528Calponin homology (CH) domain
44446426Glutamine amidotransferases class-II
21222211Ribosomal protein S15
12231211Thaumatin family
1112117Fructose-1-6-bisphosphatase, N-terminal domain
1112117Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
31645322SRF-type transcription factor (DNA-binding and dimerisation domain)
881188952GATA zinc finger
313861575436277Amino acid permease
333510327Prolyl oligopeptidase family
21122210Ribosomal protein L30p/L7e
910121391063Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
54496432Aconitase family (aconitate hydratase)
12452216Glycosyl hydrolase family 10
44433523Glycosyl hydrolases family 17
22222212Ribosomal protein S5, N-terminal domain
111115Nucleoside diphosphate kinase
112Tetraspanin family
21222110Ribosomal protein S10p/S20e
535910436Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
111115SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
333310426Polyprenyl synthetase
45545427Hexokinase
341197438Dynamin family
1111116Transcription factor TFIID (or TATA-binding protein, TBP)
44555427Rieske [2Fe-2S] domain
134Phytochrome region
108101110857Biotin-requiring enzyme
1211117Phosphofructokinase
22222212Ribosomal protein S17
1121218Hydroxymethylglutaryl-coenzyme A reductase
33453422FGGY family of carbohydrate kinases, N-terminal domain
11111620191289Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
22222212Transcription factor TFIIB repeat
8510119649Cytidine and deoxycytidylate deaminase zinc-binding region
111115Molybdopterin oxidoreductase
71511871967Chromo (CHRromatin Organisation MOdifier) domain
21322212Phosphatidylinositol-specific phospholipase C, Y domain
33322215Phosphatidylinositol-specific phospholipase C, X domain
8411117445D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
33333217Malic enzyme, N-terminal domain
212212106-phosphogluconate dehydrogenase, C-terminal domain
11123226268115Multicopper oxidase
1110101414968WW domain
1111116Ribosomal RNA adenine dimethylase
1211117Yeast PIR protein repeat
10698135122146116723WD domain, G-beta repeat
74966537Heavy-metal-associated domain
11Transferrin
34443321Adenylate kinase
21223212Phosphoglucomutase/phosphomannomutase, C-terminal domain
22112210Ribosomal protein S8
1111116Ribosomal protein S11
44444323LIM domain
11Matrixin
23332316Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
11REV protein (anti-repression trans-activator protein)
22333215chorismate binding enzyme
3233331760s Acidic ribosomal protein
44545426Prenyltransferase and squalene oxidase repeat
65555329Protein kinase C terminal domain
1111116Single-strand binding protein family
111115S-adenosylmethionine synthetase, N-terminal domain
77986744Bromodomain
1311131619981Acyl-CoA dehydrogenase, C-terminal domain
15151516151591Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
24445322Ribonuclease T2 family
33333318HSF-type DNA-binding
23222213SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
911162012977Serine carboxypeptidase
88888747Phosphatidylinositol 3- and 4-kinase
12434115Transketolase, thiamine diphosphate binding domain
2588326Glycosyl hydrolases family 11
23334318Inositol monophosphatase family
43443422Glutaredoxin
44574327Isocitrate lyase family
22222212Serine hydroxymethyltransferase
32456222Iron-containing alcohol dehydrogenase
22222212Ribosomal protein L10
24222416KOW motif
111115Ribosomal protein L34
21222211RF-1 domain
62443120Sodium:solute symporter family
1121117Imidazoleglycerol-phosphate dehydratase
11114DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
55665532Protein phosphatase 2C
22322213Nucleotidyl transferase
448911238Carbonic anhydrase
111115Phosphoribulokinase / Uridine kinase family
57101011649Fatty acid desaturase
66666636MutS domain V
1111217Delta-aminolevulinic acid dehydratase
64565430Arginase family
66666636MCM P-loop domain
12321211Squalene/phytoene synthase
9810107549FHA domain
325863657541334AMP-binding enzyme
33453321G-protein alpha subunit
78887745HMG (high mobility group) box
111722251315103His Kinase A (phospho-acceptor) domain
33333318Armadillo/beta-catenin-like repeat
242646337226227Tetratricopeptide repeat
34453120Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
991111111162BRCA1 C Terminus (BRCT) domain
55997742Glycosyl transferases group 1
55787537Glycosyl transferase family 2
21442215SAM domain (Sterile alpha motif)
1111116linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
712414Pectate lyase
1112319ribonuclease
1111116Urease, gamma subunit
64464428CoA-ligase
82629194619147Phosphopantetheine attachment site
22432316Formyl transferase
1191011101061Metallopeptidase family M24
18101717141692Leucine Rich Repeat
333551918628324alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
44444424PB1 domain
22222212Staphylococcal nuclease homologue
1171010101058Rab-GTPase-TBC domain
1111116Tudor domain
1111116WH1 domain
35644426Zinc finger, ZZ type
21115HRDC domain
97101010854CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
34333420S1 RNA binding domain
111115HIUase/Transthyretin family
46874332AhpC/TSA family
44544627tRNA synthetases class I (W and Y)
212117UvrD/REP helicase N-terminal domain
54556530Rhodanese-like domain
22322112Universal stress protein family
353669957631342Acetyltransferase (GNAT) family
2111117SecE/Sec61-gamma subunits of protein translocation complex
111115C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
999910753tRNA synthetase class II core domain (G, H, P, S and T)
1111116SpoU rRNA Methylase family
21222211Tetrapyrrole (Corrin/Porphyrin) Methylases
1111116Glycosyl transferase family, a/b domain
111115PDZ domain
655715341Class II Aldolase and Adducin N-terminal domain
43444423Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
44553425Fes/CIP4, and EFC/F-BAR homology domain
36444526IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
45764430Phospholipase D Active site motif
1212118Regulator of G protein signaling domain
44444424GTPase-activator protein for Ras-like GTPase
44544425RasGEF domain
44544425RasGEF N-terminal motif
88898849RhoGAP domain
65766434RhoGEF domain
34333319SPRY domain
33333318RNA polymerase Rpb1, domain 2
21222110Guanylate kinase
54444324Gelsolin repeat
610468943UBA/TS-N domain
171521231716109PHD-finger
11Filamin/ABP280 repeat
1111116GGL domain
66666636HECT-domain (ubiquitin-transferase)
31223314Helix-hairpin-helix motif
1111116MSP (Major sperm protein) domain
46574329Ribonuclease III domain
22222111Region in Clathrin and VPS
23332316RanBP1 domain
22222111PPIC-type PPIASE domain
42344320Zn-finger in Ran binding protein and others
191525211816114Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11331110Poly(ADP-ribose) polymerase catalytic domain
1111116Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
6140751006940385F-box domain
1111116Elongation factor 1 gamma, conserved domain
44645427Calpain family cysteine protease
32233215Copper fist DNA binding domain
54555529CRAL/TRIO domain
13233249514136BTB/POZ domain
21574120Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
33443320Voltage gated chloride channel
321044124Caspase domain
47181819975GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
162731414122178ABC transporter transmembrane region
2013455Integrase core domain
87779543FAD binding domain
31410717758Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111217HAMP domain
22222212ribosomal L5P family C-terminus
55667433Insulinase (Peptidase family M16)
33444321Dehydrogenase E1 component
1111116Lumazine binding domain
65666635Elongation factor G C-terminus
54456428HMGL-like
44444424DnaJ central domain
23342317Starch binding domain
22332214Ribosomal protein L1p/L10e family
5812107648Cation transporting ATPase, C-terminus
7911139857Cation transporter/ATPase, N-terminus
1122118dUTPase
534106331Aconitase C-terminal domain
44334321Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
82229205019148Acyl transferase domain
1111116Urease beta subunit
33698534Dihydrodipicolinate synthetase family
272744424027207haloacid dehalogenase-like hydrolase
3261214138Glycosyl hydrolases family 2
10724212712101Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
11114Acylphosphatase
1111116Adenylosuccinate synthetase
1211229Asparaginase, N-terminal
31322213Peptidase S24-like
1111116Inorganic pyrophosphatase
9111316101069Glycosyl hydrolases family 16
34334421Glycosyl hydrolases family 15
78121910561NADH:flavin oxidoreductase / NADH oxidase family
413541183-hydroxyacyl-CoA dehydrogenase, C-terminal domain
21334114Glycosyl hydrolase family 20, catalytic domain
44444424HhH-GPD superfamily base excision DNA repair protein
1111116AIR carboxylase
92726362621145GMC oxidoreductase
22224214Asparagine synthase
2141317351798Fungal cellulose binding domain
65555531Septin
121217EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
12483119Flavin-binding monooxygenase-like
33543321tRNA synthetases class I (E and Q), catalytic domain
21444116tRNA synthetases class I (R)
43454323XPG N-terminal domain
811142723790Metallo-beta-lactamase superfamily
2214110F5/8 type C domain
23422619Choline/Carnitine o-acyltransferase
1111116Putative esterase
1211117Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
12213110Arginosuccinate synthase
111115Electron transfer flavoprotein FAD-binding domain
33333318RNB domain
3581310544Dioxygenase
22335217CNH domain
12233314Diacylglycerol kinase catalytic domain
77688642Dual specificity phosphatase, catalytic domain
22322213P21-Rho-binding domain
12101212111168PX domain
33564324Ras association (RalGDS/AF-6) domain
64664430UBX domain
44444424VHS domain
1111116Phosphoinositide 3-kinase C2
22223213DAHP synthetase I family
14131311101071Carbon-nitrogen hydrolase
124411N-acetyltransferase
1111116Prephenate dehydratase
53445324Syntaxin
55555530Pumilio-family RNA binding repeat
66666636Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
22222212ER lumen protein retaining receptor
22222212Glycoprotease family
21222110Histidinol dehydrogenase
43444524impB/mucB/samB family
1111116
1111116Ribosomal L15
1111116Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1111116Ribosomal S17
1111217Ribulose-phosphate 3 epimerase family
111115Translationally controlled tumour protein
3598328Glycosyl hydrolase family 7
1111116RNA pseudouridylate synthase
54655429Histone deacetylase domain
13445320POT family
1111116PWWP domain
181924261615118SET domain
78121818972Isochorismatase family
43882429Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
47663632XPG I-region
1111116Acetokinase family
22321212DNA photolyase
22NlpC/P60 family
112Cation-independent mannose-6-phosphate receptor repeat
1142210Nitroreductase family
344411228Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
111115Ribosomal protein S16
22232213Acyl CoA binding protein
44445425Cullin family
1381517241087FAD binding domain
314172233796O-methyltransferase domain
33656225EamA-like transporter family
2122119
88898849ThiF family
1111116Ribosomal family S4e
62152122268Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
541298341Ammonium Transporter Family
34664528Sulfate permease family
111115MATH domain
22222212Dehydratase family
22432215Transaldolase/Fructose-6-phosphate aldolase
32433217Mechanosensitive ion channel
1111116GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
44444424Adaptor complexes medium subunit family
556521Exonuclease
1211117Dipeptidyl peptidase IV (DPP IV) N-terminal region
112NB-ARC domain
71617283515118Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
11Sodium:sulfate symporter transmembrane region
1111116DNA-dependent RNA polymerase
1122129FAD binding domain in molybdopterin dehydrogenase
112Peptidase S7, Flavivirus NS3 serine protease
1111116Glycosyl transferase family 4
2211118HCO3- transporter family
22222212Nucleosome assembly protein (NAP)
44445425Synaptobrevin
1111116GMP synthase C terminal domain
55Phage lysozyme
56799541Adenosine/AMP deaminase
77867742Oxidoreductase FAD-binding domain
1510512437Thioesterase domain
22222212Histidine biosynthesis protein
33335320Glycosyltransferase family 20
2151312UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
12351315PAS fold
21222211Probable molybdopterin binding domain
45444425Sec1 family
22222212GDP dissociation inhibitor
77887744Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
34555426Initiation factor 2 subunit family
123PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
1111116Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
1211117GTP1/OBG
33565325Gamma-glutamyltranspeptidase
112Ribosomal L40e family
1111116GrpE
22222212TatD related DNase
1111116Inhibitor of apoptosis-promoting Bax1
1111116Eukaryotic DNA topoisomerase I, catalytic core
22333316Dynamin central region
213342156-O-methylguanine DNA methyltransferase, DNA binding domain
32341215Bacteriorhodopsin-like protein
43344220Carboxyl transferase domain
35562425UbiA prenyltransferase family
22DegT/DnrJ/EryC1/StrS aminotransferase family
45101612552Endoribonuclease L-PSP
1113MarR family
22Phosphorylase superfamily
65888540Cys/Met metabolism PLP-dependent enzyme
3581013645Glycosyl hydrolases family 31
112318NADH ubiquinone oxidoreductase, 20 Kd subunit
10151416181083ABC-2 type transporter
44654326Amino-transferase class IV
54554528CDP-alcohol phosphatidyltransferase
11114Calpain large subunit, domain III
33