PFAM Domains • Cladochytrium polystomum WB228 v1.0
Annotations/GenomesBatde5Blyhe1Chylag1Chytri1Clapol1_1Obemuc1Rhihy1Spipu1TotalAnnotation Description
PFAMs
5,4376,5469,27712,40812,37012,19810,0538,37476,663
1313181115707 transmembrane receptor (rhodopsin family)
1423107 transmembrane receptor (Secretin family)
453217158542162167 transmembrane sweet-taste receptor of 3 GCPR
4027455447544948364ATPase family associated with various cellular activities (AAA)
60661011071339913055751ABC transporter
4448444436ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
1514182023211817146Elongation factor Tu GTP binding domain
97152316271812127Helix-loop-helix DNA-binding domain
213613141412882Hsp20/alpha crystallin family
6118927813890Hsp70 protein
98710118101275KH domain
1113Kunitz/Bovine pancreatic trypsin inhibitor domain
112SH2 domain
4521305142606069378SH3 domain
6111010181191186Actin
2433223463912853348Ankyrin repeat
2251619136PAN domain
811119131391589ADP-ribosylation factor family
433710384015309222Eukaryotic aspartyl protease
1415226330767723320Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
111112119Cytochrome c
3214225726Double-stranded RNA binding motif
31331124247130EF hand
21254Fe-4S binding domain
22Fibronectin type II domain
223413520Fibronectin type III domain
11Globin
3671381118672Glutathione S-transferase, C-terminal domain
1113111211Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
3910614615718223Homeodomain
1919Kazal-type serine protease inhibitor domain
2433222422lactate/malate dehydrogenase, NAD binding domain
11Lectin C-type domain
7101217131213993Myosin head (motor domain)
921244152314612236Cytochrome P450
1481251852552512722541511,641Protein kinase domain
981111179121289Pyridine nucleotide-disulphide oxidoreductase
2922415580373432330Ras family
1023114161242118Response regulator receiver domain
23236723RNase H
69467578897610389625RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
123Reverse transcriptase (RNA-dependent DNA polymerase)
22Serpin (serine protease inhibitor)
1146863534Copper/zinc superoxide dismutase (SODC)
434522222Iron/manganese superoxide dismutases, alpha-hairpin domain
516431743172213176Subtilase family
5910344011118128Sugar (and other) transporter
810143029221715145Thioredoxin
55Trefoil (P-type) domain
2259Trypsin
8557978756Tubulin/FtsZ family, GTPase domain
31225114von Willebrand factor type A domain
621110von Willebrand factor type D domain
471653104356916186571Zinc finger, C2H2 type
39477998269226Zinc finger, C3HC4 type (RING finger)
10497810221282Zinc knuckle
2343545329Protein-tyrosine phosphatase
2226325682334536332short chain dehydrogenase
88101628142121126Zinc-binding dehydrogenase
6455764542Thiolase, N-terminal domain
2322543324Beta-ketoacyl synthase, N-terminal domain
42223143212Fe-2S iron-sulfur cluster binding domain
134Papain family cysteine protease
11111218Enolase, C-terminal TIM barrel domain
123Cytochrome C and Quinol oxidase polypeptide I
213Cytochrome C oxidase subunit II, periplasmic domain
7878987862Glutamine amidotransferase class-I
10131113119101087TCP-1/cpn60 chaperonin family
112ATP synthase A chain
2346444330Glutamine synthetase, catalytic domain
1112112110Triosephosphate isomerase
1736283934323122239E1-E2 ATPase
71518196382714144Core histone H2A/H2B/H3/H4
314Bacterial regulatory helix-turn-helix protein, lysR family
1315Copper binding proteins, plastocyanin/azurin family
1243211822Alpha amylase, catalytic domain
552859101256Phorbol esters/diacylglycerol binding domain (C1 domain)
855101098964Bacterial transferase hexapeptide (six repeats)
5155542330tRNA synthetases class I (I, L, M and V)
16811301512139114Cyclin, N-terminal domain
27941912347Carboxylesterase family
3751010412657DNA polymerase family B
3435434329ATP synthase subunit C
11114Legume lectin domain
2338171411132100Peroxidase
11277101317269Beta-lactamase
5556888550C-5 cytosine-specific DNA methylase
22NADH dehydrogenase
11Fibrinogen beta and gamma chains, C-terminal globular domain
2415143217272919177Calcineurin-like phosphoesterase
1241018107557Cellulase (glycosyl hydrolase family 5)
5465755643tRNA synthetases class II (D, K and N)
3225446748525551374Mitochondrial carrier protein
97192219201916131Aminotransferase class I and II
8646568952Phosphoribosyl transferase domain
1412152015191918132Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
112132111Phosphoglycerate kinase
2123333219Ribosomal protein S4/S9 N-terminal domain
2222223318Ribosomal protein S12/S23
44Bacterial regulatory helix-turn-helix proteins, AraC family
111211119Chaperonin 10 Kd subunit
106222231171727152C2 domain
16981019131946140PH domain
56114124392014160bZIP transcription factor
111212202116169117Aldehyde dehydrogenase family
157136974458025328Fungal Zn(2)-Cys(6) binuclear cluster domain
2223234132363435246Cytochrome b5-like Heme/Steroid binding domain
112311413Oxidoreductase molybdopterin binding domain
56713813161785Oxidoreductase NAD-binding domain
1522223028283129205SNF2 family N-terminal domain
2122222215Ribosomal protein S7p/S5e
2312243428302926206Ubiquitin-conjugating enzyme
4557955545Isocitrate/isopropylmalate dehydrogenase
2224222218Ribosomal Proteins L2, RNA binding domain
8211039Chitinase class I
2322232218Hsp90 protein
123232215Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
121111119Dihydrofolate reductase
1521321538Chitin recognition protein
11310301922172114Cysteine-rich secretory protein family
1112321112Ribosomal protein S3, C-terminal domain
3137Annexin
139276129Eukaryotic-type carbonic anhydrase
11Bacterial regulatory proteins, luxR family
35344334292-oxoacid dehydrogenases acyltransferase (catalytic domain)
3126Catalase
11122119Disintegrin
32233114UDP-glucoronosyl and UDP-glucosyl transferase
234534526Aminotransferase class-III
2224222218Ribosomal protein S19
1511211214DNA gyrase B
1121128Thiamine pyrophosphate enzyme, central domain
3246433429Lyase
2224254122Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
134Ferritin-like domain
610422740251912181Adenylate and Guanylate cyclase catalytic domain
111211119ATP synthase delta (OSCP) subunit
111121119Orotidine 5'-phosphate decarboxylase / HUMPS family
11ATP:guanido phosphotransferase, C-terminal catalytic domain
121111119Indole-3-glycerol phosphate synthase
2518Aromatic amino acid lyase
3245443328Pyruvate kinase, barrel domain
1725262427302627202Kinesin motor domain
3619274134373537266DnaJ domain
1414142218141414124Proteasome subunit
32496610343Major intrinsic protein
111111118ATP synthase
34665428Glycosyl hydrolase family 1
851312189108833'5'-cyclic nucleotide phosphodiesterase
1224211215Profilin
234322218Ribosomal protein L22p/L17e
2132432219Ribosomal protein L14p/L23e
45615Resolvase, N terminal domain
1316162119142023142Ubiquitin family
545754636Cofilin/tropomyosin-type actin-binding protein
111132111114-3-3 protein
32232410531Alkaline phosphatase
4314710119462Zinc carboxypeptidase
59151741151512129Aldo/keto reductase family
1687779132188Myb-like DNA-binding domain
2142312318Forkhead domain
11Glycosyl hydrolases family 32 N-terminal domain
122213112Ribosomal protein L16p/L10e
123352218Ribosomal protein S14p/S29e
6581271011766FKBP-type peptidyl-prolyl cis-trans isomerase
1223624222Glutathione peroxidase
1113
31575781046Flavodoxin
3323222219Calreticulin family
101110321021123109Common central domain of tyrosinase
44781077552Aminotransferase class-V
2622222220Ribonucleotide reductase, small chain
4848546168685349449DEAD/DEAH box helicase
6662799296989591679Helicase conserved C-terminal domain
1111116Fructose-bisphosphate aldolase class-I
1111122110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222221213Ribosomal protein L23
1211112110Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11112219Ribosomal protein L5
2469656543Pyridoxal-dependent decarboxylase conserved domain
4456553436Citrate synthase, C-terminal domain
6378666648GHMP kinases N terminal domain
56107779758Biotin carboxylase, N-terminal domain
1212311112Tryptophan synthase alpha chain
66912171514988Pyridoxal-phosphate dependent enzyme
87111314681582NUDIX domain
2456458640pfkB family carbohydrate kinase
14527147Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
2123432219Ribosomal protein L3
2124222217Ribosomal protein L11, RNA binding domain
43875771051Histidine phosphatase superfamily (branch 1)
1211111210Thymidylate synthase
411511Lipoxygenase
4338444434ATP synthase alpha/beta chain, C terminal domain
67131210991278Calponin homology (CH) domain
3425436734Glutamine amidotransferases class-II
11Phosphoenolpyruvate carboxylase
2122222215Ribosomal protein S15
3111118'Cold-shock' DNA-binding domain
12126Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
1512411116Ribonucleotide reductase, all-alpha domain
2123223217Ribosomal protein S2
123121313SRF-type transcription factor (DNA-binding and dimerisation domain)
712223324412723189GATA zinc finger
8731551131989Amino acid permease
761113512131178Prolyl oligopeptidase family
1234222117Ribosomal protein L30p/L7e
13537331035Histidine phosphatase superfamily (branch 2)
11112219Respiratory-chain NADH dehydrogenase, 30 Kd subunit
2344453429Aconitase family (aconitate hydratase)
22Glycosyl hydrolase family 10
156Glycosyl hydrolases family 17
222222315Ribosomal protein S5, N-terminal domain
4168368541Nucleoside diphosphate kinase
3323822427Tetraspanin family
1221221112Ribosomal protein S10p/S20e
3651511169469Arrestin (or S-antigen), N-terminal domain
121111119Phosphoglucose isomerase
1112121110Carbohydrate phosphorylase
133222114SecY translocase
11311119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2323222218Ribosomal protein L6
3135333324Polyprenyl synthetase
2114333219Hexokinase
411551074551Dynamin family
125122114Biopterin-dependent aromatic amino acid hydroxylase
111211119Transcription factor TFIID (or TATA-binding protein, TBP)
275256936Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
11phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
22Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
33Phytochrome region
33Proton-conducting membrane transporter
76109989866Biotin-requiring enzyme
1121222112Phosphofructokinase
2122233217Ribosomal protein S17
212123112Hydroxymethylglutaryl-coenzyme A reductase
4123222319FGGY family of carbohydrate kinases, N-terminal domain
122333115FERM central domain
12111219Sodium:dicarboxylate symporter family
22MerR family regulatory protein
6613121710121187Enoyl-CoA hydratase/isomerase
2214223218Ribosomal protein S9/S16
2223222217Transcription factor TFIIB repeat
63471279654Cytidine and deoxycytidylate deaminase zinc-binding region
21211119Molybdopterin oxidoreductase
5717831581376Chromo (CHRromatin Organisation MOdifier) domain
11111117Phosphatidylinositol-specific phospholipase C, Y domain
11111117Phosphatidylinositol-specific phospholipase C, X domain
2244653228D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22112311Malic enzyme, N-terminal domain
11Bacterial regulatory proteins, gntR family
12111112106-phosphogluconate dehydrogenase, C-terminal domain
331112098257Multicopper oxidase
67112119202214120WW domain
211111119Ribosomal RNA adenine dimethylase
1751281731822181861912021,455WD domain, G-beta repeat
11Calponin family repeat
4343453531Heavy-metal-associated domain
8579778657Adenylate kinase
2325332222Phosphoglucomutase/phosphomannomutase, C-terminal domain
2123222216Ribosomal protein S8
2132322217Ribosomal protein S11
126967751466LIM domain
11Matrixin
35310385340Regulator of chromosome condensation (RCC1) repeat
2224222218Ribosomal protein S13/S18
11111128Tau and MAP protein, tubulin-binding repeat
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2222222216chorismate binding enzyme
322435362860s Acidic ribosomal protein
13111119CUB domain
4233444529Prenyltransferase and squalene oxidase repeat
724101010141269Protein kinase C terminal domain
1213121112Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
109151015121119101Bromodomain
33Bacterial regulatory proteins, tetR family
118111615151611103Acyl-CoA dehydrogenase, C-terminal domain
189152018171718132Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
4263410130Ribonuclease T2 family
1556746640HSF-type DNA-binding
2242212SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
313111513812378Serine carboxypeptidase
1159131012131083Phosphatidylinositol 3- and 4-kinase
22DeoR C terminal sensor domain
211111119Transketolase, thiamine diphosphate binding domain
1121211211WHEP-TRS domain
212233215Inositol monophosphatase family
3247336533Glutaredoxin
1221111211Isocitrate lyase family
2123223217Serine hydroxymethyltransferase
11111117Iron-containing alcohol dehydrogenase
212233215Ribosomal protein L10
7175668646KOW motif
1111116Ribosomal protein L34
111111118Ribosomal protein L33
133332217RF-1 domain
1422211Sodium:solute symporter family
21111129Imidazoleglycerol-phosphate dehydratase
12111129DNA polymerase family A
112122110IMP dehydrogenase / GMP reductase domain
1111321313Glucose-6-phosphate dehydrogenase, NAD binding domain
779101277968Protein phosphatase 2C
4256656640Nucleotidyl transferase
2126343223Carbonic anhydrase
114422216Phosphoribulokinase / Uridine kinase family
6361791815781Fatty acid desaturase
5567866548MutS domain V
114111110Delta-aminolevulinic acid dehydratase
122222213Arginase family
869811108868MCM P-loop domain
1335433224Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 5 Middle
11Bacterial extracellular solute-binding proteins, family 3
910171620131819122FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
1619223338303128217AMP-binding enzyme
946301035316131G-protein alpha subunit
712921915131298HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
112Cytochrome c oxidase subunit III
151451653168His Kinase A (phospho-acceptor) domain
93666881056Armadillo/beta-catenin-like repeat
4217152226215755255Tetratricopeptide repeat
25101924162411111Ion transport protein
1411211213DNA gyrase/topoisomerase IV, subunit A
33Binding-protein-dependent transport system inner membrane component
11Periplasmic binding proteins and sugar binding domain of LacI family
63547681352BRCA1 C Terminus (BRCT) domain
5391351912975Glycosyl transferases group 1
6525856946Glycosyl transferase family 2
2211103107550SAM domain (Sterile alpha motif)
131322214linker histone H1 and H5 family
1122111110Ribosomal protein L7/L12 C-terminal domain
22Pectate lyase
22ribonuclease
111111118Urease, gamma subunit
3336333327CoA-ligase
325315991258Phosphopantetheine attachment site
2223222419Formyl transferase
11Cellulose binding domain
769121310121079Metallopeptidase family M24
541245792713729960713Leucine Rich Repeat
1085111693727123alpha/beta hydrolase fold
3436733433RNA polymerase Rpb2, domain 6
578131765768PB1 domain
1121111210Staphylococcal nuclease homologue
1311161923181110121Rab-GTPase-TBC domain
111111118Tudor domain
11121118WH1 domain
31611997652Zinc finger, ZZ type
113121211HRDC domain
1011132421152122137CBS domain
224222317Ribosomal protein L13
1223222216Ribosomal protein L4/L1 family
111211119Clp protease
2335544430S1 RNA binding domain
1111116HIUase/Transthyretin family
4447678747AhpC/TSA family
3234344427tRNA synthetases class I (W and Y)
121127UvrD/REP helicase N-terminal domain
729128168870Rhodanese-like domain
71191919213014130Universal stress protein family
189153225234728197Acetyltransferase (GNAT) family
1212118SecE/Sec61-gamma subunits of protein translocation complex
222422115C-terminal regulatory domain of Threonine dehydratase
2212232216AIR synthase related protein, N-terminal domain
7368888755tRNA synthetase class II core domain (G, H, P, S and T)
2112222113SpoU rRNA Methylase family
134334422Tetrapyrrole (Corrin/Porphyrin) Methylases
1212111110Glycosyl transferase family, a/b domain
21126PDZ domain
1112511113Class II Aldolase and Adducin N-terminal domain
112Diacylglycerol kinase accessory domain
3653535737Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
2587101091263Fes/CIP4, and EFC/F-BAR homology domain
219131915172421139IQ calmodulin-binding motif
2123222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
1124Phospholipase D Active site motif
51013121494774Regulator of G protein signaling domain
4477453741GTPase-activator protein for Ras-like GTPase
710161517161114106RasGEF domain
32610121081162RasGEF N-terminal motif
147182527232523162RhoGAP domain
1012181620111320120RhoGEF domain
51771178551SPRY domain
4733933335RNA polymerase Rpb1, domain 2
233323218Guanylate kinase
6376665746Gelsolin repeat
11610131415121899UBA/TS-N domain
117111213161431115PHD-finger
212241113GGL domain
661010131012774HECT-domain (ubiquitin-transferase)
31111613Helix-hairpin-helix motif
112BRCA2 repeat
1211725827MSP (Major sperm protein) domain
12123244432Ribonuclease III domain
1544643229Region in Clathrin and VPS
3144332323RanBP1 domain
2124263222PPIC-type PPIASE domain
3629899450Zn-finger in Ran binding protein and others
15481122132727127Zinc finger C-x8-C-x5-C-x3-H type (and similar)
2111322416B-box zinc finger
1313573225Poly(ADP-ribose) polymerase catalytic domain
11231210Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
3261014192316573342F-box domain
121321111Elongation factor 1 gamma, conserved domain
1343464126Calpain family cysteine protease
1421111112Copper fist DNA binding domain
74821930159103CRAL/TRIO domain
25812182914997BTB/POZ domain
1481125124166Ricin-type beta-trefoil lectin domain
111111118Inhibitor of Apoptosis domain
3337549438Voltage gated chloride channel
3461195240Caspase domain
241011111226985GDSL-like Lipase/Acylhydrolase
111111219Poly-adenylate binding protein, unique domain
111111129POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
2331484967507222362ABC transporter transmembrane region
248485637FAD binding domain
2311054631Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1122511HAMP domain
123232215ribosomal L5P family C-terminus
5367887650Insulinase (Peptidase family M16)
4238455435Dehydrogenase E1 component
111112119Lumazine binding domain
7457999757Elongation factor G C-terminus
4245544533HMGL-like
325433323DnaJ central domain
112Sulfotransferase domain
3243642327Ribosomal protein L1p/L10e family
913102117161712115Cation transporting ATPase, C-terminus
916132215171716125Cation transporter/ATPase, N-terminus
122131111dUTPase
2245453429Aconitase C-terminal domain
2434445430Amino acid kinase family
111111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
1222533321Acyl transferase domain
11111117Urease beta subunit
2520162725224842225haloacid dehalogenase-like hydrolase
12115Glycosyl hydrolases family 2
192312048358154Glycosyl hydrolases family 18
1612111114Proliferating cell nuclear antigen, N-terminal domain
111115Translation initiation factor IF-3, C-terminal domain
11114Acylphosphatase
11111117Adenylosuccinate synthetase
112111119Asparaginase, N-terminal
3214234423Peptidase S24-like
1121211