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PFAM Domains • Fusarium oxysporum F2-04 v1.0
Annotations/GenomesFoxF1004_1FoxF1010_1FoxF201_1FoxF204_1FoxF206_1FoxF207_1FusoxT415Fusoxy1Fusoxys1TotalAnnotation Description
PFAMs
16,91115,88216,64016,65916,42816,31016,43015,99516,307147,562
11111111197 transmembrane receptor (rhodopsin family)
554444443377 transmembrane receptor (Secretin family)
575656575757585461513ATPase family associated with various cellular activities (AAA)
838484828987918792779ABC transporter
18131615201881411133ATP synthase alpha/beta family, nucleotide-binding domain
151615151515151515136Elongation factor Tu GTP binding domain
352726282421212021223Helix-loop-helix DNA-binding domain
44456676446Hsp20/alpha crystallin family
161517151718161518147Hsp70 protein
77787788766KH domain
141414131313141413122SH3 domain
11111111111110111198Actin
695156585757504962509Ankyrin repeat
45444446641PAN domain
11111111111111111199ADP-ribosylation factor family
262526272525222522223Eukaryotic aspartyl protease
66776655553Cyclic nucleotide-binding domain
1113Beta/Gamma crystallin
1111111119Cytochrome c
1111111119Double-stranded RNA binding motif
22222222218EF hand
11112129Fibronectin type III domain
44444433535Globin
202121211919202219182Glutathione S-transferase, C-terminal domain
1111111119Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
55555555545Homeodomain
87669977766lactate/malate dehydrogenase, NAD binding domain
44444454639Myosin head (motor domain)
1791671651691691591851551581,506Cytochrome P450
1791571711731741761721591801,541Protein kinase domain
191920181920211918173Pyridine nucleotide-disulphide oxidoreductase
353033332232292931274Ras family
292327272527292628241Response regulator receiver domain
23553236332RNase H
535253535555535252478RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
44444443435Copper/zinc superoxide dismutase (SODC)
22222222218Iron/manganese superoxide dismutases, alpha-hairpin domain
393939404039424045363Subtilase family
1972032032042032022021952001,809Sugar (and other) transporter
191918181919191919169Thioredoxin
33333322325Trypsin
14913101210812795Tubulin/FtsZ family, GTPase domain
11112211111von Willebrand factor type A domain
483946464748484335400Zinc finger, C2H2 type
64554555645Zinc finger, C3HC4 type (RING finger)
32333433125Zinc knuckle
22222222218Protein-tyrosine phosphatase
2392252462452382362292362142,108short chain dehydrogenase
1301241301291281271291221191,138Zinc-binding dehydrogenase
91099109107881Thiolase, N-terminal domain
161615151513151416135Beta-ketoacyl synthase, N-terminal domain
565555656482Fe-2S iron-sulfur cluster binding domain
1111111119Enolase, C-terminal TIM barrel domain
111111111111111212101Glutamine amidotransferase class-I
10101010101010101090TCP-1/cpn60 chaperonin family
55555544442Glutamine synthetase, catalytic domain
1111111119Triosephosphate isomerase
353434343536333534310E1-E2 ATPase
88889987873Core histone H2A/H2B/H3/H4
1111111110101191094Alpha amylase, catalytic domain
21222122115Phorbol esters/diacylglycerol binding domain (C1 domain)
88787888971Bacterial transferase hexapeptide (six repeats)
55555555545tRNA synthetases class I (I, L, M and V)
161014161310111311114Cyclin, N-terminal domain
394040394244484343378Carboxylesterase family
44444444436DNA polymerase family B
55555555545ATP synthase subunit C
66666686656Peroxidase
252224242423312226221Beta-lactamase
33332222222C-5 cytosine-specific DNA methylase
252728272929272426242Calcineurin-like phosphoesterase
202020202020241919182Cellulase (glycosyl hydrolase family 5)
77777778764tRNA synthetases class II (D, K and N)
554853535554495149467Mitochondrial carrier protein
11111117recA bacterial DNA recombination protein
383536363636383735327Aminotransferase class I and II
65666547550Phosphoribosyl transferase domain
10101010101010101090Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111119Phosphoglycerate kinase
22222222218Ribosomal protein S4/S9 N-terminal domain
22222222218Ribosomal protein S12/S23
1111111119Bacterial regulatory helix-turn-helix proteins, AraC family
1111111119Chaperonin 10 Kd subunit
141313131312131213116C2 domain
88888888872PH domain
645359595146444654476bZIP transcription factor
606659605960706360557Aldehyde dehydrogenase family
6355276356366356386406196185,583Fungal Zn(2)-Cys(6) binuclear cluster domain
403636363938363831330Cytochrome b5-like Heme/Steroid binding domain
8788881081075Oxidoreductase molybdopterin binding domain
282928292929282728255Oxidoreductase NAD-binding domain
333133333232273027278SNF2 family N-terminal domain
22222222218Ribosomal protein S7p/S5e
212122232121212120191Ubiquitin-conjugating enzyme
10111111111110101196Isocitrate/isopropylmalate dehydrogenase
22222222218Ribosomal Proteins L2, RNA binding domain
1111111119Hsp90 protein
22222222218Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111119Dihydrofolate reductase
9710119769876Chitin recognition protein
54555575445Cysteine-rich secretory protein family
1111111119Ribosomal protein S3, C-terminal domain
888888881074Cupin
22222222218Annexin
33333343328Eukaryotic-type carbonic anhydrase
1111111119Chalcone and stilbene synthases, N-terminal domain
555555545442-oxoacid dehydrogenases acyltransferase (catalytic domain)
1281111111187786Catalase
22222222218Disintegrin
151415151515151314131UDP-glucoronosyl and UDP-glucosyl transferase
171717171717141617149Aminotransferase class-III
22222222218Ribosomal protein S19
1111111119DNA gyrase B
171817171615131313139Thiamine pyrophosphate enzyme, central domain
98888989875Lyase
22222222218Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
33333334328Sodium:neurotransmitter symporter family
1111228Ferritin-like domain
1111111119Adenylate and Guanylate cyclase catalytic domain
7355423433ATP synthase delta (OSCP) subunit
1111111119Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111119Indole-3-glycerol phosphate synthase
34333222224Aromatic amino acid lyase
1111111119Pyruvate kinase, barrel domain
11111010101010101092Kinesin motor domain
312730303030292730264DnaJ domain
141414141414141414126Proteasome subunit
668866710865Major intrinsic protein
1111111119ATP synthase
66666676756Glycosyl hydrolase family 1
11111111193'5'-cyclic nucleotide phosphodiesterase
1111111119Profilin
22222222218Ribosomal protein L22p/L17e
22222222218Ribosomal protein L14p/L23e
101010109810101087Ubiquitin family
88888878972Cofilin/tropomyosin-type actin-binding protein
8466665475214-3-3 protein
22222222218Alkaline phosphatase
99999999981Zinc carboxypeptidase
484747474647494544420Aldo/keto reductase family
11899101211121193Myb-like DNA-binding domain
44446644440Forkhead domain
81212121414101010102Glycosyl hydrolases family 32 N-terminal domain
22222222218Ribosomal protein L16p/L10e
22222222218Ribosomal protein S14p/S29e
33333333327FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
131313141313111213115Flavodoxin
1111111119Calreticulin family
171417171615181615145Common central domain of tyrosinase
111011111111991194Aminotransferase class-V
1111111119Ribonucleotide reductase, small chain
525152524848525149455DEAD/DEAH box helicase
888786878283838486766Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222218Ribosomal protein L23
22222222218Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111111119Ribosomal protein L5
141313141313171313123Pyridoxal-dependent decarboxylase conserved domain
44444444436Citrate synthase, C-terminal domain
55555555545GHMP kinases N terminal domain
87777777764Biotin carboxylase, N-terminal domain
1111111119Tryptophan synthase alpha chain
212120202020232322190Pyridoxal-phosphate dependent enzyme
161616161616161616144NUDIX domain
78788886767pfkB family carbohydrate kinase
111111111111121014102Glycosyl hydrolases family 28
44444444436Luciferase-like monooxygenase
22222222218Ribosomal protein L3
22222211216Ribosomal protein L11, RNA binding domain
211821212020201924184Histidine phosphatase superfamily (branch 1)
11111111210Thymidylate synthase
32333333326Lipoxygenase
18131615191771411130ATP synthase alpha/beta chain, C terminal domain
45455454541Calponin homology (CH) domain
23332333224Glutamine amidotransferases class-II
22222222218Ribosomal protein S15
22322222118Thaumatin family
22222222218Fructose-1-6-bisphosphatase, N-terminal domain
1111111119Ribonucleotide reductase, all-alpha domain
22222222218Ribosomal protein S2
33323343226SRF-type transcription factor (DNA-binding and dimerisation domain)
151416171111121215123GATA zinc finger
484645454646424344405Amino acid permease
99999913131292Prolyl oligopeptidase family
22222222218Ribosomal protein L30p/L7e
151114141313111113115Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
66666666755Aconitase family (aconitate hydratase)
57555566650Glycosyl hydrolase family 10
33333333327Glycosyl hydrolases family 17
22222222218Ribosomal protein S5, N-terminal domain
1111111119Nucleoside diphosphate kinase
1111111119Tetraspanin family
22222222218Ribosomal protein S10p/S20e
87775668660Arrestin (or S-antigen), N-terminal domain
1111111119Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
1111111119SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222218Ribosomal protein L6
33333364533Polyprenyl synthetase
77776666658Hexokinase
201819191919172117169Dynamin family
1111111119Transcription factor TFIID (or TATA-binding protein, TBP)
121212111212111212106Rieske [2Fe-2S] domain
1111111119Phytochrome region
12111111111111101199Biotin-requiring enzyme
1111111119Phosphofructokinase
22222222218Ribosomal protein S17
627115287149Hydroxymethylglutaryl-coenzyme A reductase
44544444437FGGY family of carbohydrate kinases, N-terminal domain
1111111119Sodium:dicarboxylate symporter family
242125242323212624211Enoyl-CoA hydratase/isomerase
22222222218Ribosomal protein S9/S16
22222222218Transcription factor TFIIB repeat
88888898873Cytidine and deoxycytidylate deaminase zinc-binding region
22222222218Molybdopterin oxidoreductase
191214111813181520140Chromo (CHRromatin Organisation MOdifier) domain
108997787873Phosphatidylinositol-specific phospholipase C, Y domain
12101111991091293Phosphatidylinositol-specific phospholipase C, X domain
181617171818181715154D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222222218Malic enzyme, N-terminal domain
31223312320PEP-utilising enzyme, mobile domain
434455555406-phosphogluconate dehydrogenase, C-terminal domain
191821201818151917165Multicopper oxidase
121111111111111111100WW domain
22222222218Ribosomal RNA adenine dimethylase
1201201251251221191261251391,121WD domain, G-beta repeat
98989978774Heavy-metal-associated domain
43333343430Adenylate kinase
22222222218Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222222218Ribosomal protein S8
22222222218Ribosomal protein S11
55555555545LIM domain
3111111211Matrixin
22222222218Regulator of chromosome condensation (RCC1) repeat
22222222218Ribosomal protein S13/S18
33333333327chorismate binding enzyme
3333333332760s Acidic ribosomal protein
44444444537Prenyltransferase and squalene oxidase repeat
33322333325Protein kinase C terminal domain
1111111119Single-strand binding protein family
1111111119S-adenosylmethionine synthetase, N-terminal domain
99101010109101188Bromodomain
181819191919181917166Acyl-CoA dehydrogenase, C-terminal domain
131314131313131313118Ubiquitin carboxyl-terminal hydrolase
1111111119Ribosomal protein L36
33333343328Ribonuclease T2 family
63554443438HSF-type DNA-binding
22222222218SRP54-type protein, GTPase domain
22222222218Urease alpha-subunit, N-terminal domain
121212121212151212111Serine carboxypeptidase
11101010881010885Phosphatidylinositol 3- and 4-kinase
45445598852Transketolase, thiamine diphosphate binding domain
33333333327Glycosyl hydrolases family 11
55555556647Inositol monophosphatase family
44444444638Glutaredoxin
22222222218Isocitrate lyase family
33333333327Serine hydroxymethyltransferase
1412111013139129103Iron-containing alcohol dehydrogenase
22222222218Ribosomal protein L10
22222222218KOW motif
1111111119Ribosomal protein L34
1111116Ribosomal protein L33
33333333327RF-1 domain
44444444537Sodium:solute symporter family
1111111119Imidazoleglycerol-phosphate dehydratase
1111111119DNA polymerase family A
1111111119IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
66666666654Protein phosphatase 2C
22222222218Nucleotidyl transferase
56665578654Carbonic anhydrase
11111121110Phosphoribulokinase / Uridine kinase family
151313131212131110112Fatty acid desaturase
66666666654MutS domain V
1111111119Delta-aminolevulinic acid dehydratase
87777777764Arginase family
1189910879778MCM P-loop domain
33333333327Squalene/phytoene synthase
1111111119Bacterial extracellular solute-binding proteins, family 5 Middle
10101010101010101090FHA domain
898484858381827976743AMP-binding enzyme
66666686656G-protein alpha subunit
151016121110111112108HMG (high mobility group) box
11E2 (early) protein, N terminal
241921212020242225196His Kinase A (phospho-acceptor) domain
22222222218Armadillo/beta-catenin-like repeat
151616151618151716144Tetratricopeptide repeat
44443433332Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
77677777762BRCA1 C Terminus (BRCT) domain
101210111212107892Glycosyl transferases group 1
22222222218Glycosyl transferase family 2
21121119SAM domain (Sterile alpha motif)
1111111119linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
111111111111111112100Pectate lyase
33333333327ribonuclease
22222222218Urease, gamma subunit
99999979777CoA-ligase
373637363736353133318Phosphopantetheine attachment site
44444444436Formyl transferase
141314141313121111115Metallopeptidase family M24
34333342328Leucine Rich Repeat
151515151414141113126alpha/beta hydrolase fold
33333333327RNA polymerase Rpb2, domain 6
44444444436PB1 domain
22222222218Staphylococcal nuclease homologue
121212121212121212108Rab-GTPase-TBC domain
1111111119Tudor domain
1111111119WH1 domain
54444444437Zinc finger, ZZ type
42132232120HRDC domain
10121111111188991CBS domain
22222222218Ribosomal protein L13
22222222218Ribosomal protein L4/L1 family
1111111119Clp protease
44444444436S1 RNA binding domain
1111111119HIUase/Transthyretin family
53565643340AhpC/TSA family
56555554545tRNA synthetases class I (W and Y)
21121122214UvrD/REP helicase N-terminal domain
171717161717131618148Rhodanese-like domain
22222222218Universal stress protein family
474548474848495249433Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
1111111119C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
89998899877tRNA synthetase class II core domain (G, H, P, S and T)
1111111119SpoU rRNA Methylase family
22222222218Tetrapyrrole (Corrin/Porphyrin) Methylases
1111111119Glycosyl transferase family, a/b domain
58777785963Class II Aldolase and Adducin N-terminal domain
89667779968Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
54545454440Fes/CIP4, and EFC/F-BAR homology domain
22222222218IQ calmodulin-binding motif
22222222218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
33333333327Phospholipase D Active site motif
212015151615151120148Regulator of G protein signaling domain
44444443435GTPase-activator protein for Ras-like GTPase
44444445437RasGEF domain
44444445437RasGEF N-terminal motif
78778888869RhoGAP domain
76776666758RhoGEF domain
44555544541SPRY domain
33333333327RNA polymerase Rpb1, domain 2
33333333327Guanylate kinase
44444444436Gelsolin repeat
44444454437UBA/TS-N domain
131313131313131313117PHD-finger
1111111119GGL domain
66666665653HECT-domain (ubiquitin-transferase)
1111111119Helix-hairpin-helix motif
1111111119MSP (Major sperm protein) domain
22222222218Ribonuclease III domain
44444444436Region in Clathrin and VPS
22222223219RanBP1 domain
1111111119PPIC-type PPIASE domain
22221222217Zn-finger in Ran binding protein and others
10101010101010111091Zinc finger C-x8-C-x5-C-x3-H type (and similar)
45443453436Poly(ADP-ribose) polymerase catalytic domain
1111111119Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
232021212020231722187F-box domain
1111111119Elongation factor 1 gamma, conserved domain
18101213111114914112Calpain family cysteine protease
33442222123Copper fist DNA binding domain
66666666654CRAL/TRIO domain
262523252526292835242BTB/POZ domain
1111111119Inhibitor of Apoptosis domain
44444444436Voltage gated chloride channel
66777766759Caspase domain
101010101010911888GDSL-like Lipase/Acylhydrolase
1111111119Poly-adenylate binding protein, unique domain
1111111119POLO box duplicated region
404140394042434145371ABC transporter transmembrane region
141413141414121111117FAD binding domain
201818192017171715161Condensation domain
1111111119S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111111119HAMP domain
22222222218ribosomal L5P family C-terminus
979966912774Insulinase (Peptidase family M16)
44444454437Dehydrogenase E1 component
1111111119Lumazine binding domain
66666666654Elongation factor G C-terminus
76666666655HMGL-like
44444444436DnaJ central domain
1111111119Sulfotransferase domain