PFAM Domains • Russula ochroleuca Přilba v1.0
Annotations/GenomesRusbre1Ruscom1Rusdis1Rusoch1Rusrug1Rusvin1TotalAnnotation Description
PFAMs
8,6937,9658,3029,0458,5338,30850,846
374139443842241ATPase family associated with various cellular activities (AAA)
363140343328202ABC transporter
44454627ATP synthase alpha/beta family, nucleotide-binding domain
16141716171898Elongation factor Tu GTP binding domain
1111111111964Helix-loop-helix DNA-binding domain
46584431Hsp20/alpha crystallin family
8877211364Hsp70 protein
78867743KH domain
11Methyl-accepting chemotaxis protein (MCP) signalling domain
15141314161486SH3 domain
1111131391269Actin
411725323837190Ankyrin repeat
77777742ADP-ribosylation factor family
211822353447177Eukaryotic aspartyl protease
33333419Cyclic nucleotide-binding domain
1121117Cytochrome c
858118848Double-stranded RNA binding motif
23344319EF hand
73985537Glutathione S-transferase, C-terminal domain
1111116Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
88101881466Homeodomain
22222212lactate/malate dehydrogenase, NAD binding domain
75444529Myosin head (motor domain)
147112111169166193898Cytochrome P450
1981671831831621701,063Protein kinase domain
910886849Pyridine nucleotide-disulphide oxidoreductase
402932284329201Ras family
97878847Response regulator receiver domain
1482210642RNase H
666166715856378RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
112Copper/zinc superoxide dismutase (SODC)
22222212Iron/manganese superoxide dismutases, alpha-hairpin domain
117869647Subtilase family
251921192717128Sugar (and other) transporter
1011111312865Thioredoxin
656661140Tubulin/FtsZ family, GTPase domain
11von Willebrand factor type A domain
232032242321143Zinc finger, C2H2 type
577611642Zinc finger, C3HC4 type (RING finger)
77998747Zinc knuckle
22222212Protein-tyrosine phosphatase
523736394537246short chain dehydrogenase
18151614141390Zinc-binding dehydrogenase
54566531Thiolase, N-terminal domain
22221211Beta-ketoacyl synthase, N-terminal domain
1111152Fe-2S iron-sulfur cluster binding domain
1111116Enolase, C-terminal TIM barrel domain
798981051Glutamine amidotransferase class-I
10101914121277TCP-1/cpn60 chaperonin family
33334319Glutamine synthetase, catalytic domain
1111116Triosephosphate isomerase
181821171718109E1-E2 ATPase
13151319151489Core histone H2A/H2B/H3/H4
1113Copper binding proteins, plastocyanin/azurin family
77966641Alpha amylase, catalytic domain
94444530Phorbol esters/diacylglycerol binding domain (C1 domain)
44443423Bacterial transferase hexapeptide (six repeats)
65444427tRNA synthetases class I (I, L, M and V)
1699991567Cyclin, N-terminal domain
11111214162084Carboxylesterase family
44444424DNA polymerase family B
23342317ATP synthase subunit C
32234317Peroxidase
61244421Beta-lactamase
34554425C-5 cytosine-specific DNA methylase
232130202020134Calcineurin-like phosphoesterase
1191211111064Cellulase (glycosyl hydrolase family 5)
55555631tRNA synthetases class II (D, K and N)
313333333232194Mitochondrial carrier protein
11recA bacterial DNA recombination protein
1212121512972Aminotransferase class I and II
54443222Phosphoribosyl transferase domain
17131514121485Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
1111217Chaperonin 10 Kd subunit
13101513151076C2 domain
1013911101063PH domain
9111113111469bZIP transcription factor
16161618121896Aldehyde dehydrogenase family
444242453938250Fungal Zn(2)-Cys(6) binuclear cluster domain
211618212019115Cytochrome b5-like Heme/Steroid binding domain
55465631Oxidoreductase NAD-binding domain
212120222320127SNF2 family N-terminal domain
22322314Ribosomal protein S7p/S5e
182320272121130Ubiquitin-conjugating enzyme
55565531Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
52222215Hsp90 protein
22222212Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111115Dihydrofolate reductase
11Chitin recognition protein
1221118Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
1111116Cupin
334333192-oxoacid dehydrogenases acyltransferase (catalytic domain)
22522215Catalase
1111116Disintegrin
32223214UDP-glucoronosyl and UDP-glucosyl transferase
65685535Aminotransferase class-III
21222211Ribosomal protein S19
1111116DNA gyrase B
52523219Thiamine pyrophosphate enzyme, central domain
33333318Lyase
11911114Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111116Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
22222212Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
1010998955Kinesin motor domain
293128292927173DnaJ domain
14141516141689Proteasome subunit
53568431Major intrinsic protein
1111116ATP synthase
11111163'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
22222212Ribosomal protein L22p/L17e
32222213Ribosomal protein L14p/L23e
161517261712103Ubiquitin family
45565429Cofilin/tropomyosin-type actin-binding protein
2246622214-3-3 protein
1111116Zinc carboxypeptidase
222019282426139Aldo/keto reductase family
57777841Myb-like DNA-binding domain
55555530Forkhead domain
22222313Ribosomal protein L16p/L10e
22221211Ribosomal protein S14p/S29e
44434322FKBP-type peptidyl-prolyl cis-trans isomerase
43343320Flavodoxin
1111116Calreticulin family
6671112850Common central domain of tyrosinase
57666636Aminotransferase class-V
22232516Ribonucleotide reductase, small chain
545758565451330DEAD/DEAH box helicase
758075807372455Helicase conserved C-terminal domain
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212Ribosomal protein L23
121116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111115Ribosomal protein L5
54646429Pyridoxal-dependent decarboxylase conserved domain
54444324Citrate synthase, C-terminal domain
45454527GHMP kinases N terminal domain
46555530Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
66667637Pyridoxal-phosphate dependent enzyme
11'Paired box' domain
14131415131483NUDIX domain
45567431pfkB family carbohydrate kinase
22222212Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
771076744Histidine phosphatase superfamily (branch 1)
111115Thymidylate synthase
44454425ATP synthase alpha/beta chain, C terminal domain
75453428Calponin homology (CH) domain
22221211Glutamine amidotransferases class-II
21222312Ribosomal protein S15
1121117Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
22223213SRF-type transcription factor (DNA-binding and dimerisation domain)
11121414111476GATA zinc finger
55765533Amino acid permease
53863631Prolyl oligopeptidase family
22222212Ribosomal protein L30p/L7e
97765640Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
54444425Aconitase family (aconitate hydratase)
1111116Glycosyl hydrolases family 17
22222212Ribosomal protein S5, N-terminal domain
22221211Nucleoside diphosphate kinase
33243318Tetraspanin family
22322213Ribosomal protein S10p/S20e
43455526Arrestin (or S-antigen), N-terminal domain
1111217Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1111217SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
45454527Polyprenyl synthetase
22223213Hexokinase
10612971054Dynamin family
31131312Transcription factor TFIID (or TATA-binding protein, TBP)
22222212Rieske [2Fe-2S] domain
11Phytochrome region
76787742Biotin-requiring enzyme
111115Phosphofructokinase
22222212Ribosomal protein S17
1111116Hydroxymethylglutaryl-coenzyme A reductase
33327220FGGY family of carbohydrate kinases, N-terminal domain
66679640Enoyl-CoA hydratase/isomerase
22223213Ribosomal protein S9/S16
32223214Transcription factor TFIIB repeat
55676534Cytidine and deoxycytidylate deaminase zinc-binding region
1111116Molybdopterin oxidoreductase
666651342Chromo (CHRromatin Organisation MOdifier) domain
1111116Phosphatidylinositol-specific phospholipase C, Y domain
1112229Phosphatidylinositol-specific phospholipase C, X domain
33332317D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
33333217Malic enzyme, N-terminal domain
1111156-phosphogluconate dehydrogenase, C-terminal domain
1591313171279Multicopper oxidase
118121010960WW domain
22222212Ribosomal RNA adenine dimethylase
119107111112111113673WD domain, G-beta repeat
85645432Heavy-metal-associated domain
24333318Adenylate kinase
22222111Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222313Ribosomal protein S8
22222212Ribosomal protein S11
86856639LIM domain
43434321Regulator of chromosome condensation (RCC1) repeat
22222111Ribosomal protein S13/S18
22222212chorismate binding enzyme
3333431960s Acidic ribosomal protein
43445424Prenyltransferase and squalene oxidase repeat
67675536Protein kinase C terminal domain
1111116Single-strand binding protein family
11Type II/IV secretion system protein
1111116S-adenosylmethionine synthetase, N-terminal domain
11101011151067Bromodomain
97886846Acyl-CoA dehydrogenase, C-terminal domain
141815926888295Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
31311110Ribonuclease T2 family
54444627HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
98714191168Serine carboxypeptidase
1088108852Phosphatidylinositol 3- and 4-kinase
23222213Transketolase, thiamine diphosphate binding domain
54223218Inositol monophosphatase family
56555531Glutaredoxin
22282218Isocitrate lyase family
1131118Serine hydroxymethyltransferase
32333317Iron-containing alcohol dehydrogenase
12222211Ribosomal protein L10
65555430KOW motif
11125Ribosomal protein L34
1111116Ribosomal protein L33
33333217RF-1 domain
2111117Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
111115DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
7671071047Protein phosphatase 2C
33342318Nucleotidyl transferase
12241212Carbonic anhydrase
1111116Phosphoribulokinase / Uridine kinase family
76757537Fatty acid desaturase
86666638MutS domain V
1111116Delta-aminolevulinic acid dehydratase
34324218Arginase family
136666845MCM P-loop domain
22222212Squalene/phytoene synthase
9111112121065FHA domain
15191513131590AMP-binding enzyme
14161720111997G-protein alpha subunit
14131516121484HMG (high mobility group) box
54343423His Kinase A (phospho-acceptor) domain
23224215Armadillo/beta-catenin-like repeat
15151419151492Tetratricopeptide repeat
64342322Ion transport protein
41214113DNA gyrase/topoisomerase IV, subunit A
65745431BRCA1 C Terminus (BRCT) domain
55546631Glycosyl transferases group 1
24222214Glycosyl transferase family 2
112SAM domain (Sterile alpha motif)
33334319linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
1111116Urease, gamma subunit
33333318CoA-ligase
34334421Phosphopantetheine attachment site
22321212Formyl transferase
991099955Metallopeptidase family M24
1211128Leucine Rich Repeat
45585330alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
54557632PB1 domain
21222312Staphylococcal nuclease homologue
13121213101272Rab-GTPase-TBC domain
1111116Tudor domain
1111116WH1 domain
43333319Zinc finger, ZZ type
1211128HRDC domain
66765636CBS domain
22223213Ribosomal protein L13
22223213Ribosomal protein L4/L1 family
1111116Clp protease
55344425S1 RNA binding domain
1111116HIUase/Transthyretin family
44454425AhpC/TSA family
44433523tRNA synthetases class I (W and Y)
2151211UvrD/REP helicase N-terminal domain
97888848Rhodanese-like domain
22222414Universal stress protein family
9121614111072Acetyltransferase (GNAT) family
1112117SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
35555427tRNA synthetase class II core domain (G, H, P, S and T)
12222211Tetrapyrrole (Corrin/Porphyrin) Methylases
1111116Glycosyl transferase family, a/b domain
1111116Class II Aldolase and Adducin N-terminal domain
54444425Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
64444426Fes/CIP4, and EFC/F-BAR homology domain
22222212IQ calmodulin-binding motif
42221213Phosphoinositide 3-kinase family, accessory domain (PIK domain)
12231211Phospholipase D Active site motif
43233318Regulator of G protein signaling domain
34444423GTPase-activator protein for Ras-like GTPase
15991012964RasGEF domain
1277109853RasGEF N-terminal motif
14131414131583RhoGAP domain
13151316201693RhoGEF domain
34444423SPRY domain
33334319RNA polymerase Rpb1, domain 2
111126Guanylate kinase
22233214Gelsolin repeat
66564936UBA/TS-N domain
1615151591383PHD-finger
1111116GGL domain
85956538HECT-domain (ubiquitin-transferase)
1121117Helix-hairpin-helix motif
1111116MSP (Major sperm protein) domain
33434522Ribonuclease III domain
44453424Region in Clathrin and VPS
32233316RanBP1 domain
22232213PPIC-type PPIASE domain
31232213Zn-finger in Ran binding protein and others
11131011111167Zinc finger C-x8-C-x5-C-x3-H type (and similar)
213B-box zinc finger
24522318Poly(ADP-ribose) polymerase catalytic domain
21222211Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
362430242720161F-box domain
101111115Elongation factor 1 gamma, conserved domain
111115Calpain family cysteine protease
22222212Copper fist DNA binding domain
78786743CRAL/TRIO domain
523745894074337BTB/POZ domain
11Ricin-type beta-trefoil lectin domain
11114Inhibitor of Apoptosis domain
33334319Voltage gated chloride channel
211414192017105Caspase domain
111126GDSL-like Lipase/Acylhydrolase
1122118Poly-adenylate binding protein, unique domain
1111127POLO box duplicated region
16111213171079ABC transporter transmembrane region
43353321FAD binding domain
11Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
2112118HAMP domain
22121210ribosomal L5P family C-terminus
55555631Insulinase (Peptidase family M16)
54445527Dehydrogenase E1 component
1111116Lumazine binding domain
76777640Elongation factor G C-terminus
74444427HMGL-like
44444424DnaJ central domain
43325421Starch binding domain
33334319Ribosomal protein L1p/L10e family
57884537Cation transporting ATPase, C-terminus
68886642Cation transporter/ATPase, N-terminus
1111116dUTPase
44444424Aconitase C-terminal domain
34333319Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
22321212Acyl transferase domain
1111116Urease beta subunit
22222212Dihydrodipicolinate synthetase family
18171715131595haloacid dehalogenase-like hydrolase
1111116Glycosyl hydrolases family 2
86776640Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
1111116Translation initiation factor IF-3, C-terminal domain
1111116Adenylosuccinate synthetase
1111116Asparaginase, N-terminal
32333418Peptidase S24-like
1111116Inorganic pyrophosphatase
1391098554Glycosyl hydrolases family 16
74466835Glycosyl hydrolases family 15
17471771466NADH:flavin oxidoreductase / NADH oxidase family
1111153-hydroxyacyl-CoA dehydrogenase, C-terminal domain
1111116Glycosyl hydrolase family 20, catalytic domain
56655532HhH-GPD superfamily base excision DNA repair protein
2111117AIR carboxylase
1111131691070GMC oxidoreductase
22222212Asparagine synthase
11Fungal cellulose binding domain
66668638Septin
1111116EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
2211129Flavin-binding monooxygenase-like
33233317tRNA synthetases class I (E and Q), catalytic domain
1161110tRNA synthetases class I (R)
65544428XPG N-terminal domain
54644427Metallo-beta-lactamase superfamily
11F5/8 type C domain
35436122Choline/Carnitine o-acyltransferase
1111116Putative esterase
1111116Glycosyl hydrolase family 9
1111318Ferrochelatase
12232212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33333419RNB domain
11352214Dioxygenase
11710913757CNH domain
22422214Diacylglycerol kinase catalytic domain
15121314161484Dual specificity phosphatase, catalytic domain
1112117MyTH4 domain
84496637P21-Rho-binding domain
12121312131274PX domain
21232414Ras association (RalGDS/AF-6) domain
44444323UBX domain
65655532VHS domain
2111117Phosphoinositide 3-kinase C2
12222312DAHP synthetase I family
33333419Carbon-nitrogen hydrolase
11Geminivirus Rep catalytic domain
1111116Prephenate dehydratase
44444424Syntaxin
44544526Pumilio-family RNA binding repeat
88767743Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
1111116ER lumen protein retaining receptor
22222313Glycoprotease family
111115Histidinol dehydrogenase
33343218impB/mucB/samB family
1111116Ribosomal L15
33343319Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1111116Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
22222212RNA pseudouridylate synthase
78767641Histone deacetylase domain
2211118POT family
22222212PWWP domain
15131713111685SET domain
1111217Isochorismatase family
213Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
57554531XPG I-region
123Acetokinase family
11114DNA photolyase
1111116Cytosol aminopeptidase family, catalytic domain
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
33333318Acyl CoA binding protein
74457532Cullin family
112127Elongation factor TS
23222314FAD binding domain
14616121453O-methyltransferase domain
44548429EamA-like transporter family
8128811855ThiF family
2112118Ribosomal family S4e
111115Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
111115Ammonium Transporter Family
23332417Sulfate permease family
1111116MATH domain
22222212Dehydratase family
12222211Transaldolase/Fructose-6-phosphate aldolase
1111116Mechanosensitive ion channel
22222313GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
54444425Adaptor complexes medium subunit family
788129852Exonuclease
111115Dipeptidyl peptidase IV (DPP IV) N-terminal region
7312417NB-ARC domain
942121735Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
1111116Sodium:sulfate symporter transmembrane region
1111116DNA-dependent RNA polymerase
11Picornavirus core protein 2A
111115Glycosyl transferase family 4
11114HCO3- transporter family
22221211Nucleosome assembly protein (NAP)
44444424Synaptobrevin
1111127GMP synthase C terminal domain
32222213Adenosine/AMP deaminase
33333419Oxidoreductase FAD-binding domain
1111127Thioesterase domain
22222212Histidine biosynthesis protein
22333316Glycosyltransferase family 20
1111116UDP-glucose/GDP-mannose dehydrogenase family, central domain
13222212Carbamoyl-phosphate synthase small chain, CPSase domain
22221211PAS fold
1111116Probable molybdopterin binding domain
54444425Sec1 family
22222212GDP dissociation inhibitor
76676739Sodium/hydrogen exchanger family
22322314RNA polymerase Rpb3/RpoA insert domain
44444424Initiation factor 2 subunit family
112PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
1111116Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
1111116GTP1/OBG
22212110Gamma-glutamyltranspeptidase
1111116Ribosomal L40e family
11511110GrpE
32333418TatD related DNase
22222212Inhibitor of apoptosis-promoting Bax1
1112117Eukaryotic DNA topoisomerase I, catalytic core
761086845Dynamin central region
223222136-O-methylguanine DNA methyltransferase, DNA binding domain
1131118Bacteriorhodopsin-like protein
22222212Carboxyl transferase domain
81071391158UbiA prenyltransferase family
22223213Endoribonuclease L-PSP
32222213Phosphorylase superfamily
47544529Cys/Met metabolism PLP-dependent enzyme
33334319Glycosyl hydrolases family 31
1111116NADH ubiquinone oxidoreductase, 20 Kd subunit
48655533ABC-2 type transporter
33333318Bestrophin, RFP-TM, chloride channel
53433321Amino-transferase class IV
44444222CDP-alcohol phosphatidyltransferase
111115Calpain large subunit, domain III
33333318ATP dependent DNA ligase domain
633631031FMN-dependent dehydrogenase
1111116Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
134333173-beta hydroxysteroid dehydrogenase/isomerase family
1112117Glycosyl hydrolases family 38 N-terminal domain
1111127Nitrite and sulphite reductase 4Fe-4S domain
1111116Ribosomal protein S18
1111116Clathrin light chain
1212129Galactose-1-phosphate uridyl transferase, N-terminal domain
22234316Ubiquitin carboxyl-terminal hydrolase, family 1
1111116Ribosomal protein S19e
1111116Ribosomal protein S6e
33443421Transcription factor S-II (TFIIS)
1111116Surface antigen
44442422emp24/gp25L/p24 family/GOLD
2111117NifU-like domain
111115Cyclin-dependent kinase regulatory subunit
21222110Asparaginase
1111116F-actin capping protein, beta subunit
1111116Fructose-bisphosphate aldolase class-II
32222213Semialdehyde dehydrogenase, NAD binding domain
34333117DNA mismatch repair protein, C-terminal domain
1111116Dephospho-CoA kinase
21231110MAPEG family
1111116G10 protein
11Heme oxygenase