Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10 - 11:59pm PDT July 14. System Status updates available here.
PFAM Domains • Teratosphaeriaceae sp. NC1134 v1.0
Annotations/GenomesAciri1_isoBauco1Clasph1Disac1Horac1Horwer1Mycfi2Mycgr3Pieho1_1Polci1TerNC1134_1Ternu1TotalAnnotation Description
PFAMs
7,8307,2849,8327,0699,45217,8408,2796,4205,4907,81011,0947,576105,976
33177 transmembrane receptor (Secretin family)
414245414082494236384640542ATPase family associated with various cellular activities (AAA)
383040383372404325463729471ABC transporter
44444834444451ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
151416141530141416141514191Elongation factor Tu GTP binding domain
1189109181310891511131Helix-loop-helix DNA-binding domain
33322422324232Hsp20/alpha crystallin family
771079207778107106Hsp70 protein
91089716998879109KH domain
111111118SH2 domain
222114211326212322221519239SH3 domain
101010101120107109109126Actin
29351178411414116651438383Ankyrin repeat
221212514121639PAN domain
777771477777791ADP-ribosylation factor family
13121161522131917112612177Eukaryotic aspartyl protease
44444844444452Cyclic nucleotide-binding domain
213Cytochrome b(C-terminal)/b6/petD
11111211111113Cytochrome c
1242422121122Double-stranded RNA binding motif
20202184418201918319165EF hand
1211211121134Fe-4S binding domain
22233211420Fibronectin type III domain
111211119Globin
1312812201418164111714159Glutathione S-transferase, C-terminal domain
11111211121114Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
45455843453555Homeodomain
33332432222332lactate/malate dehydrogenase, NAD binding domain
445441055554459Myosin head (motor domain)
6353557361107917320559974824Cytochrome P450
9993112117104191106113951041191211,374Protein kinase domain
15151513122719159171913189Pyridine nucleotide-disulphide oxidoreductase
232324212348242423232723306Ras family
161721201538202210211921240Response regulator receiver domain
3212253225229RNase H
6158545853101625756575657730RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
13518Reverse transcriptase (RNA-dependent DNA polymerase)
2232512123225Copper/zinc superoxide dismutase (SODC)
22222422122225Iron/manganese superoxide dismutases, alpha-hairpin domain
34751318892813494Subtilase family
1355710023581789193195811454980Sugar (and other) transporter
11111213132310108101310144Thioredoxin
1122111211Trypsin
33343634333341Tubulin/FtsZ family, GTPase domain
3311141231222von Willebrand factor type A domain
514812551518476240542341466Zinc finger, C2H2 type
41412418451393540242346Zinc finger, C3HC4 type (RING finger)
11364113651043773Zinc knuckle
22222422222226Protein-tyrosine phosphatase
11712710491133218138124361201771061,491short chain dehydrogenase
575253375786606814507254660Zinc-binding dehydrogenase
556471067556672Thiolase, N-terminal domain
45101236101441131092Beta-ketoacyl synthase, N-terminal domain
443444643524472Fe-2S iron-sulfur cluster binding domain
22Papain family cysteine protease
21123211111117Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
123Cytochrome C oxidase subunit II, periplasmic domain
8888718888898106Glutamine amidotransferase class-I
101010101020101010101010130TCP-1/cpn60 chaperonin family
33344432243338Glutamine synthetase, catalytic domain
22211422222224Triosephosphate isomerase
16122111162811131011189176E1-E2 ATPase
6877715661088795Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
7716651513136121110121Alpha amylase, catalytic domain
22232422221226Phorbol esters/diacylglycerol binding domain (C1 domain)
89598121097889102Bacterial transferase hexapeptide (six repeats)
33434846344349tRNA synthetases class I (I, L, M and V)
779781567979697Cyclin, N-terminal domain
2021211694022172132720228Carboxylesterase family
44444844444452DNA polymerase family B
444431055444455ATP synthase subunit C
34632834334447Peroxidase
975711101110912596Beta-lactamase
13233521243231C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
11Nitrogenase component 1 type Oxidoreductase
273024332246262719263331344Calcineurin-like phosphoesterase
11111655397444188132Cellulase (glycosyl hydrolase family 5)
777871477787793tRNA synthetases class II (D, K and N)
393839383976384036383738496Mitochondrial carrier protein
112recA bacterial DNA recombination protein
151316141729151312181815195Aminotransferase class I and II
108484889794988Phosphoribosyl transferase domain
111212121124121211121212153Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111211111113Phosphoglycerate kinase
12222421212122Ribosomal protein S4/S9 N-terminal domain
22222422222226Ribosomal protein S12/S23
211111119Bacterial regulatory helix-turn-helix proteins, AraC family
11111211111113Chaperonin 10 Kd subunit
12111010102013131113811142C2 domain
181810191020171718191018194PH domain
9911612228848216124bZIP transcription factor
23181611253920189162516236Aldehyde dehydrogenase family
157120105109166164121104371801791061,548Fungal Zn(2)-Cys(6) binuclear cluster domain
242123192943242417232522294Cytochrome b5-like Heme/Steroid binding domain
4462553535244Oxidoreductase molybdopterin binding domain
15141611122314128161413168Oxidoreductase NAD-binding domain
232324252648242622242825318SNF2 family N-terminal domain
22222422222226Ribosomal protein S7p/S5e
212023212446252421212523294Ubiquitin-conjugating enzyme
888671499588797Isocitrate/isopropylmalate dehydrogenase
22222322222225Ribosomal Proteins L2, RNA binding domain
11111211111113Hsp90 protein
22222422222226Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111211111113Dihydrofolate reductase
22514216Chitin recognition protein
53224644425445Cysteine-rich secretory protein family
11111211111113Ribosomal protein S3, C-terminal domain
2553474668252Cupin
22222422122225Annexin
21216Eukaryotic-type carbonic anhydrase
112Chalcone and stilbene synthases, N-terminal domain
333336333333392-oxoacid dehydrogenases acyltransferase (catalytic domain)
257341133148455Catalase
11111211111113Disintegrin
535417UDP-glucoronosyl and UDP-glucosyl transferase
567481669597789Aminotransferase class-III
22222422322227Ribosomal protein S19
21111211111114DNA gyrase B
1066398104567579Thiamine pyrophosphate enzyme, central domain
44445845356456Lyase
22221422222225Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
241119Sodium:neurotransmitter symporter family
11111211111113Adenylate and Guanylate cyclase catalytic domain
11111211111113ATP synthase delta (OSCP) subunit
11111211111113Orotidine 5'-phosphate decarboxylase / HUMPS family
11111211211114Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
11221119Aromatic amino acid lyase
11111211111113Pyruvate kinase, barrel domain
10101010112011111010119133Kinesin motor domain
282827262752282825283028355DnaJ domain
151414141428141414141414183Proteasome subunit
88124620111091011109Major intrinsic protein
11111211111113ATP synthase
4341144225333Glycosyl hydrolase family 1
111112111111133'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
11111211111113Profilin
11212411112118Ribosomal protein L22p/L17e
21222422222225Ribosomal protein L14p/L23e
11117119171710910149135Ubiquitin family
24444742434446Cofilin/tropomyosin-type actin-binding protein
2223362222323114-3-3 protein
25341443242438Alkaline phosphatase
11711623111126Zinc carboxypeptidase
293024183060332211333425349Aldo/keto reductase family
171571161417121015915148Myb-like DNA-binding domain
44435846444555Forkhead domain
12411354273235Glycosyl hydrolases family 32 N-terminal domain
11212411112118Ribosomal protein L16p/L10e
23222631222330Ribosomal protein S14p/S29e
44444844344451FKBP-type peptidyl-prolyl cis-trans isomerase
11111211111113Glutathione peroxidase
2212222215
11Dehydrin
968661498698594Flavodoxin
11Protamine P1
11Tropomyosin
11111211111113Calreticulin family
44147414117357585Common central domain of tyrosinase
8899917845898102Aminotransferase class-V
11Gram-negative porin
11111211111113Ribonucleotide reductase, small chain
394153424190424637384441554DEAD/DEAH box helicase
7172777666145757263717271931Helicase conserved C-terminal domain
11Fructose-bisphosphate aldolase class-I
11211211121115EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222422122225Ribosomal protein L23
11111222111115Pyridoxal-dependent decarboxylase, C-terminal sheet domain
22211222221221Ribosomal protein L5
556651067555570Pyridoxal-dependent decarboxylase conserved domain
22323623223232Citrate synthase, C-terminal domain
555551055555565GHMP kinases N terminal domain
776671476477785Biotin carboxylase, N-terminal domain
11111211111113Tryptophan synthase alpha chain
9912992011118111010129Pyridoxal-phosphate dependent enzyme
131312121326141510161315172NUDIX domain
546551075555466pfkB family carbohydrate kinase
95101852171067Glycosyl hydrolases family 28
481213120Luciferase-like monooxygenase
22222422222226Ribosomal protein L3
22222421222225Ribosomal protein L11, RNA binding domain
14131615162916118151614183Histidine phosphatase superfamily (branch 1)
11Rubredoxin
11111211111113Thymidylate synthase
1121117Lipoxygenase
44444844444452ATP synthase alpha/beta chain, C terminal domain
555561055545565Calponin homology (CH) domain
55361644682656Glutamine amidotransferases class-II
22222422222226Ribosomal protein S15
11'Cold-shock' DNA-binding domain
11111211111113Thaumatin family
11211211111114Fructose-1-6-bisphosphatase, N-terminal domain
11111211111113Ribonucleotide reductase, all-alpha domain
22222422222226Ribosomal protein S2
32222343221228SRF-type transcription factor (DNA-binding and dimerisation domain)
876771298588893GATA zinc finger
45231424727483318581241350Amino acid permease
33638732245349Prolyl oligopeptidase family
21222311122120Ribosomal protein L30p/L7e
101013911191075101213129Histidine phosphatase superfamily (branch 2)
11111211111113Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44444965444456Aconitase family (aconitate hydratase)
3448124127Glycosyl hydrolase family 10
44241561443442Glycosyl hydrolases family 17
22222422222226Ribosomal protein S5, N-terminal domain
11111211111113Nucleoside diphosphate kinase
11212412112119Ribosomal protein S10p/S20e
52334102233239Arrestin (or S-antigen), N-terminal domain
11111211111113Phosphoglucose isomerase
11111211111113Carbohydrate phosphorylase
11111211111113SecY translocase
11111211111113Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222422122225Ribosomal protein L6
34343845333346Polyprenyl synthetase
34434633235444Hexokinase
9698717566811597Dynamin family
11312412711125Transcription factor TFIID (or TATA-binding protein, TBP)
54834755256862Rieske [2Fe-2S] domain
112116Phytochrome region
44Proton-conducting membrane transporter
9998918887898110Biotin-requiring enzyme
11111211111113Phosphofructokinase
22212422222225Ribosomal protein S17
11111211111113Hydroxymethylglutaryl-coenzyme A reductase
44433744344448FGGY family of carbohydrate kinases, N-terminal domain
121116Sodium:dicarboxylate symporter family
1412121523202016591312171Enoyl-CoA hydratase/isomerase
22222422222226Ribosomal protein S9/S16
22222422422228Transcription factor TFIIB repeat
8987618885798101Cytidine and deoxycytidylate deaminase zinc-binding region
11112211111114Molybdopterin oxidoreductase
47556852258562Chromo (CHRromatin Organisation MOdifier) domain
11323633231129Phosphatidylinositol-specific phospholipase C, Y domain
235261155444354Phosphatidylinositol-specific phospholipase C, X domain
1088710208639108107D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222212113222Malic enzyme, N-terminal domain
124224221222266-phosphogluconate dehydrogenase, C-terminal domain
91018108231489131612150Multicopper oxidase
787771799676797WW domain
11111211111113Ribosomal RNA adenine dimethylase
3312165142331Yeast PIR protein repeat
1111001001151032021011041421091021011,390WD domain, G-beta repeat
84634833345354Heavy-metal-associated domain
33433632335341Adenylate kinase
31313622223230Phosphoglucomutase/phosphomannomutase, C-terminal domain
12212411212120Ribosomal protein S8
11212411212119Ribosomal protein S11
45444744445453LIM domain
12224512223228Regulator of chromosome condensation (RCC1) repeat
22222422222226Ribosomal protein S13/S18
22221322222224chorismate binding enzyme
3333363333333960s Acidic ribosomal protein
44343644443447Prenyltransferase and squalene oxidase repeat
77364664574766Protein kinase C terminal domain
1111121111112Single-strand binding protein family
11111211111113S-adenosylmethionine synthetase, N-terminal domain
677681486788792Bromodomain
1613121119241415581412163Acyl-CoA dehydrogenase, C-terminal domain
141514141625171513171618194Ubiquitin carboxyl-terminal hydrolase
111111111110Ribosomal protein L36
2323242223328Ribonuclease T2 family
33333633333339HSF-type DNA-binding
22222422222226SRP54-type protein, GTPase domain
1121121111113Urease alpha-subunit, N-terminal domain
86101012161613812811130Serine carboxypeptidase
8888816887888103Phosphatidylinositol 3- and 4-kinase
22412422123227Transketolase, thiamine diphosphate binding domain
3256116125Glycosyl hydrolases family 11
33222544143336Inositol monophosphatase family
44444942544452Glutaredoxin
45232442232336Isocitrate lyase family
22222422222226Serine hydroxymethyltransferase
45425634247349Iron-containing alcohol dehydrogenase
22222412212224Ribosomal protein L10
21333236341334KOW motif
11121111110Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
11215Ribosomal protein L33
33333632223336RF-1 domain
2251162225432Sodium:solute symporter family
11111211111113Imidazoleglycerol-phosphate dehydratase
11111211111113DNA polymerase family A
11111211111113IMP dehydrogenase / GMP reductase domain
11111211111113Glucose-6-phosphate dehydrogenase, NAD binding domain
667661266466677Protein phosphatase 2C
32323632223233Nucleotidyl transferase
22336222128134Carbonic anhydrase
11211312112117Phosphoribulokinase / Uridine kinase family
11Transcriptional regulatory protein, C terminal
447651056546567Fatty acid desaturase
665661266666677MutS domain V
11111211121114Delta-aminolevulinic acid dehydratase
45413844245448Arginase family
666661266666678MCM P-loop domain
22323522223230Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 3
887981185788794FHA domain
224NADH-ubiquinone/plastoquinone oxidoreductase chain 6
354145514868555117424943545AMP-binding enzyme
33333634433341G-protein alpha subunit
769641167789787HMG (high mobility group) box
11Cytochrome c oxidase subunit III
12142017123114186161516191His Kinase A (phospho-acceptor) domain
23222423222329Armadillo/beta-catenin-like repeat
222011291119252322231117233Tetratricopeptide repeat
11Retroviral envelope protein
35233434234440Ion transport protein
11111211111113DNA gyrase/topoisomerase IV, subunit A
109689108101013711111BRCA1 C Terminus (BRCT) domain
775551474567779Glycosyl transferases group 1
37242474442649Glycosyl transferase family 2
11112214111117SAM domain (Sterile alpha motif)
11111211111113linker histone H1 and H5 family
1111211111112Ribosomal protein L7/L12 C-terminal domain
81922224Pectate lyase
112111322