PFAM Domains • Lentinula edodes W1-26 v1.0
Annotations/GenomesLenafn1Lenafn_TMI1502_1Lened_B_1_1Lenedo1Lenlat1Lennov1Lenra_T_1Lenrap1Lenrap1_155Lentinedodes1LraINPA1820_1TotalAnnotation Description
PFAMs
10,2109,6699,08310,2079,8989,65310,10910,41010,1049,72010,314109,377
22111187 transmembrane receptor (Secretin family)
4341434541413938404241454ATPase family associated with various cellular activities (AAA)
4642574944434444444641500ABC transporter
4436545444447ATP synthase alpha/beta family, nucleotide-binding domain
1516171515151517171616174Elongation factor Tu GTP binding domain
1413101312131214121312138Helix-loop-helix DNA-binding domain
9879889997992Hsp20/alpha crystallin family
11917610119881210111Hsp70 protein
7787777787779KH domain
1917132117181617181817191SH3 domain
1412141412121114131312141Actin
58111310121514271345173Ankyrin repeat
8888889998992ADP-ribosylation factor family
3332352931302829282929333Eukaryotic aspartyl protease
3333333333333Cyclic nucleotide-binding domain
111111111110Cytochrome c
884998119871192Double-stranded RNA binding motif
1121112111113EF hand
98891076659784Glutathione S-transferase, C-terminal domain
1111111111111Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
139715119888148110Homeodomain
2222222122221lactate/malate dehydrogenase, NAD binding domain
6777665665566Myosin head (motor domain)
1281291391281331291411431351331411,479Cytochrome P450
2011991782032011891982112062002022,188Protein kinase domain
1314141314141414141414152Pyridine nucleotide-disulphide oxidoreductase
2626262625262827272527289Ras family
1110799111211101011111Response regulator receiver domain
20291152215203033517207RNase H
6661586865646768646166708RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
123Reverse transcriptase (RNA-dependent DNA polymerase)
2222222222222Iron/manganese superoxide dismutases, alpha-hairpin domain
131291112111315141014134Subtilase family
4948524749484747474848530Sugar (and other) transporter
1111121011101110101112119Thioredoxin
6565546575559Tubulin/FtsZ family, GTPase domain
1111217von Willebrand factor type A domain
3326173030243131263131310Zinc finger, C2H2 type
20161116181310128188150Zinc finger, C3HC4 type (RING finger)
1291187141513161120136Zinc knuckle
3222222222223Protein-tyrosine phosphatase
9676859085818986798682935short chain dehydrogenase
5248425153515050494550541Zinc-binding dehydrogenase
5565555555556Thiolase, N-terminal domain
6759554865767Beta-ketoacyl synthase, N-terminal domain
11121111111122Fe-2S iron-sulfur cluster binding domain
1111111111111Enolase, C-terminal TIM barrel domain
9998888889993Glutamine amidotransferase class-I
1110191010111010121110124TCP-1/cpn60 chaperonin family
3333333333333Glutamine synthetase, catalytic domain
111111112111Triosephosphate isomerase
1715151615151418161615172E1-E2 ATPase
1618161717191818181518190Core histone H2A/H2B/H3/H4
1212111212121311111211129Alpha amylase, catalytic domain
6546555555556Phorbol esters/diacylglycerol binding domain (C1 domain)
5455546555554Bacterial transferase hexapeptide (six repeats)
4464464444448tRNA synthetases class I (I, L, M and V)
1617111616151414151115160Cyclin, N-terminal domain
2019232320192729271927253Carboxylesterase family
5475644454553DNA polymerase family B
4333323323332ATP synthase subunit C
1110101111101010101010113Peroxidase
3333332223229Beta-lactamase
4444444444444C-5 cytosine-specific DNA methylase
2324212525252323222223256Calcineurin-like phosphoesterase
2221202122212020202120228Cellulase (glycosyl hydrolase family 5)
8577657766670tRNA synthetases class II (D, K and N)
3837373837383737373737410Mitochondrial carrier protein
1111116recA bacterial DNA recombination protein
1515141616151818171518177Aminotransferase class I and II
4344443444341Phosphoribosyl transferase domain
1515161515151515161516168Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111111111Phosphoglycerate kinase
2222222222222Ribosomal protein S4/S9 N-terminal domain
2222222222222Ribosomal protein S12/S23
1111111111111Chaperonin 10 Kd subunit
1615121515151614151516164C2 domain
109689107779789PH domain
1617141515161515161516170bZIP transcription factor
1918232120181919181819212Aldehyde dehydrogenase family
7247648277528175616281754Fungal Zn(2)-Cys(6) binuclear cluster domain
2423192623232425262326262Cytochrome b5-like Heme/Steroid binding domain
2223222222223Oxidoreductase molybdopterin binding domain
8859889888988Oxidoreductase NAD-binding domain
2827263328262825253026302SNF2 family N-terminal domain
2222223232224Ribosomal protein S7p/S5e
2222222222222124222221242Ubiquitin-conjugating enzyme
6685666666667Isocitrate/isopropylmalate dehydrogenase
2212222222221Ribosomal Proteins L2, RNA binding domain
3222322322427Hsp90 protein
2222222222222Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111111111Dihydrofolate reductase
3323333333332Cysteine-rich secretory protein family
1111111121112Ribosomal protein S3, C-terminal domain
111112211112Cupin
2223322222224Annexin
33433343444382-oxoacid dehydrogenases acyltransferase (catalytic domain)
2111112221216Catalase
111111111110Disintegrin
76877610101181191UDP-glucoronosyl and UDP-glucosyl transferase
5555555555555Aminotransferase class-III
2212222221220Ribosomal protein S19
1111111111111DNA gyrase B
2323334443334Thiamine pyrophosphate enzyme, central domain
4454445444446Lyase
2222222222222Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111111111111Adenylate and Guanylate cyclase catalytic domain
1111111111111ATP synthase delta (OSCP) subunit
1111111111111Orotidine 5'-phosphate decarboxylase / HUMPS family
2222222221221Indole-3-glycerol phosphate synthase
2222222222222Aromatic amino acid lyase
1111111111111Pyruvate kinase, barrel domain
1312121212121099109120Kinesin motor domain
3432283332303131303029340DnaJ domain
1515151615151414151516165Proteasome subunit
2213324443432Major intrinsic protein
1111111111111ATP synthase
3332333333332Glycosyl hydrolase family 1
11111111111113'5'-cyclic nucleotide phosphodiesterase
1111111111111Profilin
2222222222222Ribosomal protein L22p/L17e
2222222222222Ribosomal protein L14p/L23e
1717131716171720211518188Ubiquitin family
5555555555555Cofilin/tropomyosin-type actin-binding protein
222222555233214-3-3 protein
4443434345434745454247487Aldo/keto reductase family
109799910991210103Myb-like DNA-binding domain
7676576866771Forkhead domain
2222222222222Ribosomal protein L16p/L10e
221222222219Ribosomal protein S14p/S29e
3333333333333FKBP-type peptidyl-prolyl cis-trans isomerase
1111111111111Glutathione peroxidase
11Dehydrin
5536557685560Flavodoxin
1111112111213Calreticulin family
4444442224236Common central domain of tyrosinase
1011111010101010101110113Aminotransferase class-V
3243224632334Ribonucleotide reductase, small chain
6157486357556574725780689DEAD/DEAH box helicase
9487819286869410098931061,017Helicase conserved C-terminal domain
111111111110Fructose-bisphosphate aldolase class-I
1111111111212EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2212222222221Ribosomal protein L23
1111111111111Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111111521217Ribosomal protein L5
5567555556660Pyridoxal-dependent decarboxylase conserved domain
4474444444447Citrate synthase, C-terminal domain
5545555555554GHMP kinases N terminal domain
6656666676666Biotin carboxylase, N-terminal domain
1111111111111Tryptophan synthase alpha chain
99129998889898Pyridoxal-phosphate dependent enzyme
171491617161517151415165NUDIX domain
6556666666664pfkB family carbohydrate kinase
1613121315151211111411143Glycosyl hydrolases family 28
2221222222221Ribosomal protein L3
2212222322222Ribosomal protein L11, RNA binding domain
1112121212111112121112128Histidine phosphatase superfamily (branch 1)
2111111111112Thymidylate synthase
1111111111111Lipoxygenase
4425544444444ATP synthase alpha/beta chain, C terminal domain
4444445454547Calponin homology (CH) domain
3333333333333Glutamine amidotransferases class-II
2222222222222Ribosomal protein S15
4345443334340Thaumatin family
1111111111111Fructose-1-6-bisphosphatase, N-terminal domain
41231121116Ribonucleotide reductase, all-alpha domain
2222222221221Ribosomal protein S2
3333333333434SRF-type transcription factor (DNA-binding and dimerisation domain)
1816161513131211131512154GATA zinc finger
87977771087885Amino acid permease
8988887899991Prolyl oligopeptidase family
2212223333326Ribosomal protein L30p/L7e
109111110101010101111113Histidine phosphatase superfamily (branch 2)
1111111111111Respiratory-chain NADH dehydrogenase, 30 Kd subunit
7464444444449Aconitase family (aconitate hydratase)
3343333333334Glycosyl hydrolase family 10
4433344434339Glycosyl hydrolases family 17
2222222222222Ribosomal protein S5, N-terminal domain
222222222220Nucleoside diphosphate kinase
4424444334339Tetraspanin family
2222221222221Ribosomal protein S10p/S20e
1211213431322Arrestin (or S-antigen), N-terminal domain
1111111111111Phosphoglucose isomerase
1111111111111Carbohydrate phosphorylase
1121111111112SecY translocase
1121111111112Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222222323Ribosomal protein L6
6687667776773Polyprenyl synthetase
2222222222222Hexokinase
1010101299999109106Dynamin family
1111111111111Transcription factor TFIID (or TATA-binding protein, TBP)
3333333233332Rieske [2Fe-2S] domain
11111211110Phytochrome region
895989810810892Biotin-requiring enzyme
1111111111111Phosphofructokinase
222222212118Ribosomal protein S17
1112111111112Hydroxymethylglutaryl-coenzyme A reductase
4444444444444FGGY family of carbohydrate kinases, N-terminal domain
119810101099999103Enoyl-CoA hydratase/isomerase
2222222222222Ribosomal protein S9/S16
3222223222224Transcription factor TFIIB repeat
6666666667667Cytidine and deoxycytidylate deaminase zinc-binding region
1111111111111Molybdopterin oxidoreductase
877979871081090Chromo (CHRromatin Organisation MOdifier) domain
3333333333333Phosphatidylinositol-specific phospholipase C, Y domain
7756667777772Phosphatidylinositol-specific phospholipase C, X domain
8879888888888D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
3333333333333Malic enzyme, N-terminal domain
11111111111116-phosphogluconate dehydrogenase, C-terminal domain
1414131414141515151415157Multicopper oxidase
8898888877887WW domain
2222222222222Ribosomal RNA adenine dimethylase
1431261211441231261431321381331381,467WD domain, G-beta repeat
4435443435342Heavy-metal-associated domain
4323433333334Adenylate kinase
2222223332326Phosphoglucomutase/phosphomannomutase, C-terminal domain
2222221221220Ribosomal protein S8
4333332223230Ribosomal protein S11
6546657766664LIM domain
6666666666666Regulator of chromosome condensation (RCC1) repeat
2223222222223Ribosomal protein S13/S18
2222222222222chorismate binding enzyme
433344334333760s Acidic ribosomal protein
3344422334335Prenyltransferase and squalene oxidase repeat
5545556665658Protein kinase C terminal domain
1111111111111Single-strand binding protein family
1111111111111S-adenosylmethionine synthetase, N-terminal domain
1111101111111415131113131Bromodomain
7777777887779Acyl-CoA dehydrogenase, C-terminal domain
1414151614141516141415161Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
2222222222222Ribonuclease T2 family
4444444444444HSF-type DNA-binding
2322222222223SRP54-type protein, GTPase domain
1111111111212Urease alpha-subunit, N-terminal domain
1511161312121311121513143Serine carboxypeptidase
88119888889893Phosphatidylinositol 3- and 4-kinase
2222222222222Transketolase, thiamine diphosphate binding domain
2222222222222Glycosyl hydrolases family 11
11114WHEP-TRS domain
3333332222228Inositol monophosphatase family
5555546564656Glutaredoxin
2222222222323Isocitrate lyase family
1131111111113Serine hydroxymethyltransferase
2222222222222Iron-containing alcohol dehydrogenase
2222222232223Ribosomal protein L10
5645565555657KOW motif
111111111110Ribosomal protein L34
111111111110Ribosomal protein L33
3323333332331RF-1 domain
3313333323330Sodium:solute symporter family
1111111111111Imidazoleglycerol-phosphate dehydratase
1111111111111DNA polymerase family A
1111111121112IMP dehydrogenase / GMP reductase domain
1111111111111Glucose-6-phosphate dehydrogenase, NAD binding domain
1211121211121213131212132Protein phosphatase 2C
3323333333332Nucleotidyl transferase
5555455545553Carbonic anhydrase
1111111111111Phosphoribulokinase / Uridine kinase family
1313121312131112131212136Fatty acid desaturase
6676666676668MutS domain V
1111111111111Delta-aminolevulinic acid dehydratase
4444444444444Arginase family
6686666766770MCM P-loop domain
2222222222323Squalene/phytoene synthase
101191315121312131313134FHA domain
4140414038383838404240436AMP-binding enzyme
1514161414141615161515164G-protein alpha subunit
2522142424242321222223244HMG (high mobility group) box
6646466755560His Kinase A (phospho-acceptor) domain
2222223423428Armadillo/beta-catenin-like repeat
1715141519151720171619184Tetratricopeptide repeat
3333323733336Ion transport protein
1221111111113DNA gyrase/topoisomerase IV, subunit A
99912881098108100BRCA1 C Terminus (BRCT) domain
6667666666667Glycosyl transferases group 1
3333333333333Glycosyl transferase family 2
4212222222223SAM domain (Sterile alpha motif)
5434444444444linker histone H1 and H5 family
1111111111111Ribosomal protein L7/L12 C-terminal domain
1111112221215Pectate lyase
2212222222221ribonuclease
1111111111111Urease, gamma subunit
3343334443438CoA-ligase
121381311121313121316136Phosphopantetheine attachment site
2212222222221Formyl transferase
1111111111111211121011122Metallopeptidase family M24
1111111211213Leucine Rich Repeat
79469989109989alpha/beta hydrolase fold
3343434453440RNA polymerase Rpb2, domain 6
5555565655557PB1 domain
2222222221221Staphylococcal nuclease homologue
1212111212121212121212131Rab-GTPase-TBC domain
1111111111111Tudor domain
1121222221218WH1 domain
3333333333333Zinc finger, ZZ type
1111111111111HRDC domain
8688667777575CBS domain
2222222222222Ribosomal protein L13
3222332322226Ribosomal protein L4/L1 family
1111111211112Clp protease
4334444563444S1 RNA binding domain
1111111121112HIUase/Transthyretin family
5555456574657AhpC/TSA family
4454444444445tRNA synthetases class I (W and Y)
2222222332325UvrD/REP helicase N-terminal domain
89888888981092Rhodanese-like domain
222222221219Universal stress protein family
2424192126252424222423256Acetyltransferase (GNAT) family
1111111111111SecE/Sec61-gamma subunits of protein translocation complex
1111111111111C-terminal regulatory domain of Threonine dehydratase
2212222222221AIR synthase related protein, N-terminal domain
5455545865658tRNA synthetase class II core domain (G, H, P, S and T)
4334443334338Tetrapyrrole (Corrin/Porphyrin) Methylases
2212222222221Glycosyl transferase family, a/b domain
4434444444443Class II Aldolase and Adducin N-terminal domain
4444444444444Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
6656665666664Fes/CIP4, and EFC/F-BAR homology domain
2222222222222IQ calmodulin-binding motif
2223222242225Phosphoinositide 3-kinase family, accessory domain (PIK domain)
2312232222223Phospholipase D Active site motif
334333222