PFAM Domains • Phaeodactylum tricornutum CCAP 1055/1 v2.0
Annotations/GenomesFracy1Phatr2Thaps3TotalAnnotation Description
PFAMs
10,4245,5446,30422,272
1722217 transmembrane sweet-taste receptor of 3 GCPR
674756170ATPase family associated with various cellular activities (AAA)
814950180ABC transporter
53412ATP synthase alpha/beta family, nucleotide-binding domain
42612EGF-like domain
26212269Elongation factor Tu GTP binding domain
55515Helix-loop-helix DNA-binding domain
14510Hsp20/alpha crystallin family
1061127Hsp70 protein
1581336KH domain
134SH3 domain
97420Actin
936274229Ankyrin repeat
11PAN domain
74819ADP-ribosylation factor family
86620Eukaryotic aspartyl protease
1692247Cyclic nucleotide-binding domain
11Cystatin domain
3339Cytochrome c
2125Double-stranded RNA binding motif
664566177EF hand
11574Fe-4S binding domain
189Fibronectin type III domain
4116Globin
167225Glutathione S-transferase, C-terminal domain
76518Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
33Kazal-type serine protease inhibitor domain
134Kringle domain
1124lactate/malate dehydrogenase, NAD binding domain
11Lipocalin / cytosolic fatty-acid binding protein family
941124Myosin head (motor domain)
306743Cytochrome P450
188113141442Protein kinase domain
24172061Pyridine nucleotide-disulphide oxidoreductase
18122454Ras family
2212640Response regulator receiver domain
415RNase H
735359185RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Serpin (serine protease inhibitor)
123Copper/zinc superoxide dismutase (SODC)
2248Iron/manganese superoxide dismutases, alpha-hairpin domain
1713737Subtilase family
14161545Sugar (and other) transporter
47212896Thioredoxin
3882672Trypsin
11Thrombospondin type 1 domain
45817Tubulin/FtsZ family, GTPase domain
52411von Willebrand factor type A domain
108725Zinc finger, C2H2 type
1034342188Zinc finger, C3HC4 type (RING finger)
2881046Zinc knuckle
213Protein-tyrosine phosphatase
664539150short chain dehydrogenase
24141755Zinc-binding dehydrogenase
44412Thiolase, N-terminal domain
3249Beta-ketoacyl synthase, N-terminal domain
1067232Fe-2S iron-sulfur cluster binding domain
1781136Papain family cysteine protease
3126Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
86822Glutamine amidotransferase class-I
15101035TCP-1/cpn60 chaperonin family
4239Glutamine synthetase, catalytic domain
83516Triosephosphate isomerase
1871742E1-E2 ATPase
27122564Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
11Phorbol esters/diacylglycerol binding domain (C1 domain)
116825Bacterial transferase hexapeptide (six repeats)
78823tRNA synthetases class I (I, L, M and V)
272450101Cyclin, N-terminal domain
718Carboxylesterase family
538DNA polymerase family B
610622ATP synthase subunit C
112Sigma-70 factor, region 1.2
751426Peroxidase
819Beta-lactamase
84113C-5 cytosine-specific DNA methylase
35242786Calcineurin-like phosphoesterase
33Cellulase (glycosyl hydrolase family 5)
76619tRNA synthetases class II (D, K and N)
695753179Mitochondrial carrier protein
29111858Aminotransferase class I and II
118625Phosphoribosyl transferase domain
37202481Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
43512Phosphoglycerate kinase
2226Ribosomal protein S4/S9 N-terminal domain
2114Ribosomal protein S12/S23
34411Chaperonin 10 Kd subunit
11Fibroblast growth factor
16181145C2 domain
12101133PH domain
118827bZIP transcription factor
136827Aldehyde dehydrogenase family
2147Fungal Zn(2)-Cys(6) binuclear cluster domain
22142157Cytochrome b5-like Heme/Steroid binding domain
4127Oxidoreductase molybdopterin binding domain
24121248Oxidoreductase NAD-binding domain
35182376SNF2 family N-terminal domain
1113Ribosomal protein S7p/S5e
26181963Ubiquitin-conjugating enzyme
2125Isocitrate/isopropylmalate dehydrogenase
1113Ribosomal Proteins L2, RNA binding domain
88Chitinase class I
52411Hsp90 protein
2226Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1124Dihydrofolate reductase
224Chitin recognition protein
1010Cysteine-rich secretory protein family
1113Ribosomal protein S3, C-terminal domain
11Cupin
123Annexin
55Eukaryotic-type carbonic anhydrase
1113Bacterial regulatory proteins, luxR family
645152-oxoacid dehydrogenases acyltransferase (catalytic domain)
11Catalase
22UDP-glucoronosyl and UDP-glucosyl transferase
107522Aminotransferase class-III
1113Ribosomal protein S19
3249DNA gyrase B
2114Thiamine pyrophosphate enzyme, central domain
3328Lyase
43310Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
325Sodium:neurotransmitter symporter family
112Ferritin-like domain
9131335Adenylate and Guanylate cyclase catalytic domain
1113ATP synthase delta (OSCP) subunit
213Bacterial DNA-binding protein
2114ATP:guanido phosphotransferase, C-terminal catalytic domain
34310Indole-3-glycerol phosphate synthase
85619Pyruvate kinase, barrel domain
19172460Kinesin motor domain
1025259213DnaJ domain
25172163Proteasome subunit
44210Major intrinsic protein
2226ATP synthase
1113Glycosyl hydrolase family 1
111111333'5'-cyclic nucleotide phosphodiesterase
3227Ribosomal protein L22p/L17e
1113Ribosomal protein L14p/L23e
257436Ubiquitin family
1113Cofilin/tropomyosin-type actin-binding protein
211414-3-3 protein
1225Alkaline phosphatase
81211Zinc carboxypeptidase
37182681Aldo/keto reductase family
472829104Myb-like DNA-binding domain
11Ribosomal protein S14p/S29e
522425101FKBP-type peptidyl-prolyl cis-trans isomerase
33410Glutathione peroxidase
2226
146626Flavodoxin
11
1113Calreticulin family
22Common central domain of tyrosinase
103417Aminotransferase class-V
3238Ribonucleotide reductase, small chain
715964194DEAD/DEAH box helicase
1327886296Helicase conserved C-terminal domain
314Fructose-bisphosphate aldolase class-I
1113EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
314Ribosomal protein L23
63211Pyridoxal-dependent decarboxylase, C-terminal sheet domain
617Potato inhibitor I family
1113Ribosomal protein L5
4228Pyridoxal-dependent decarboxylase conserved domain
1113Citrate synthase, C-terminal domain
83617GHMP kinases N terminal domain
86923Biotin carboxylase, N-terminal domain
1113Tryptophan synthase alpha chain
1581134Pyridoxal-phosphate dependent enzyme
29202271NUDIX domain
83516pfkB family carbohydrate kinase
426Glycosyl hydrolases family 28
3227Ribosomal protein L3
3227Ribosomal protein L11, RNA binding domain
50132285Histidine phosphatase superfamily (branch 1)
2327Rubredoxin
1214Thymidylate synthase
43411ATP synthase alpha/beta chain, C terminal domain
1124Calponin homology (CH) domain
761023Glutamine amidotransferases class-II
3227Phosphoenolpyruvate carboxylase
3339Ribosomal protein S15
105520'Cold-shock' DNA-binding domain
136423Fructose-1-6-bisphosphatase, N-terminal domain
3227Ribonucleotide reductase, all-alpha domain
1113Ribosomal protein S2
3249Amino acid permease
113620Prolyl oligopeptidase family
2226Ribosomal protein L30p/L7e
6410Histidine phosphatase superfamily (branch 2)
2226Aconitase family (aconitate hydratase)
213Glycosyl hydrolase family 10
4228Ribosomal protein S5, N-terminal domain
2349Nucleoside diphosphate kinase
22Galactoside-binding lectin
1113Ribosomal protein S10p/S20e
22Arrestin (or S-antigen), N-terminal domain
53412Phosphoglucose isomerase
1124SecY translocase
1113Ribosomal protein L6
65516Polyprenyl synthetase
4228Dynamin family
112Biopterin-dependent aromatic amino acid hydroxylase
1113Transcription factor TFIID (or TATA-binding protein, TBP)
134RTX calcium-binding nonapeptide repeat (4 copies)
107623Rieske [2Fe-2S] domain
1291334Biotin-requiring enzyme
1225Phosphofructokinase
3227Ribosomal protein S17
1113Hydroxymethylglutaryl-coenzyme A reductase
45413FGGY family of carbohydrate kinases, N-terminal domain
426Sodium:dicarboxylate symporter family
1361231Enoyl-CoA hydratase/isomerase
2226Ribosomal protein S9/S16
112Transcription factor TFIIB repeat
88824Cytidine and deoxycytidylate deaminase zinc-binding region
123Chromo (CHRromatin Organisation MOdifier) domain
52310Phosphatidylinositol-specific phospholipase C, Y domain
52310Phosphatidylinositol-specific phospholipase C, X domain
53210D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
112Malic enzyme, N-terminal domain
4127PEP-utilising enzyme, mobile domain
22266-phosphogluconate dehydrogenase, C-terminal domain
314Multicopper oxidase
21152258WW domain
2226Ribosomal RNA adenine dimethylase
11288101301WD domain, G-beta repeat
4217Heavy-metal-associated domain
77822Adenylate kinase
3328Phosphoglucomutase/phosphomannomutase, C-terminal domain
1113Ribosomal protein S8
1113Ribosomal protein S11
11LIM domain
22Matrixin
861630Regulator of chromosome condensation (RCC1) repeat
1113Ribosomal protein S13/S18
3137chorismate binding enzyme
4451360s Acidic ribosomal protein
34411Prenyltransferase and squalene oxidase repeat
325Protein kinase C terminal domain
1113Single-strand binding protein family
224S-adenosylmethionine synthetase, N-terminal domain
23161655Bromodomain
76518Acyl-CoA dehydrogenase, C-terminal domain
25181659Ubiquitin carboxyl-terminal hydrolase
11Ribonuclease T2 family
445060154HSF-type DNA-binding
44412SRP54-type protein, GTPase domain
1113Urease alpha-subunit, N-terminal domain
116421Serine carboxypeptidase
1113Ribosomal protein L20
12111134Phosphatidylinositol 3- and 4-kinase
2226Transketolase, thiamine diphosphate binding domain
1225WHEP-TRS domain
105924Inositol monophosphatase family
175729Glutaredoxin
3115Isocitrate lyase family
3238Serine hydroxymethyltransferase
11Iron-containing alcohol dehydrogenase
3339Ribosomal protein L10
15612KOW motif
1113Ribosomal protein L34
1113Ribosomal protein L33
65415RF-1 domain
3429Sodium:solute symporter family
1214Imidazoleglycerol-phosphate dehydratase
123DNA polymerase family A
1113IMP dehydrogenase / GMP reductase domain
2114Glucose-6-phosphate dehydrogenase, NAD binding domain
112ROK family
24201963Protein phosphatase 2C
22Carbonic anhydrase
2327Phosphoribulokinase / Uridine kinase family
20131750Fatty acid desaturase
72716MutS domain V
1113Delta-aminolevulinic acid dehydratase
1214Arginase family
95822MCM P-loop domain
3227Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 5 Middle
116623FHA domain
21121649AMP-binding enzyme
1124G-protein alpha subunit
763939154Chlorophyll A-B binding protein
34312085HMG (high mobility group) box
145120His Kinase A (phospho-acceptor) domain
891128Armadillo/beta-catenin-like repeat
706056186Tetratricopeptide repeat
13101639Ion transport protein
3249DNA gyrase/topoisomerase IV, subunit A
104620BRCA1 C Terminus (BRCT) domain
134623Glycosyl transferases group 1
66719Glycosyl transferase family 2
112SAM domain (Sterile alpha motif)
52310linker histone H1 and H5 family
3328Ribosomal protein L7/L12 C-terminal domain
1113Urease, gamma subunit
4228CoA-ligase
53311Phosphopantetheine attachment site
44311Formyl transferase
105722Metallopeptidase family M24
1505773280Leucine Rich Repeat
27141152alpha/beta hydrolase fold
4239RNA polymerase Rpb2, domain 6
11PB1 domain
53210Staphylococcal nuclease homologue
3238Rab-GTPase-TBC domain
1113Tudor domain
64414Zinc finger, ZZ type
1113HRDC domain
14131340CBS domain
2226Ribosomal protein L13
2226Ribosomal protein L4/L1 family
66618Clp protease
87823S1 RNA binding domain
1113HIUase/Transthyretin family
67316AhpC/TSA family
54413tRNA synthetases class I (W and Y)
112UvrD/REP helicase N-terminal domain
44412Rhodanese-like domain
512826105Acetyltransferase (GNAT) family
1113SecE/Sec61-gamma subunits of protein translocation complex
1113C-terminal regulatory domain of Threonine dehydratase
3238AIR synthase related protein, N-terminal domain
14101034tRNA synthetase class II core domain (G, H, P, S and T)
125926SpoU rRNA Methylase family
2237Tetrapyrrole (Corrin/Porphyrin) Methylases
3317Glycosyl transferase family, a/b domain
19233476PDZ domain
2136Class II Aldolase and Adducin N-terminal domain
112
1124Diacylglycerol kinase accessory domain
2215Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
26162668IQ calmodulin-binding motif
11Phosphoinositide 3-kinase family, accessory domain (PIK domain)
2237Phospholipase D Active site motif
22Regulator of G protein signaling domain
1113RhoGAP domain
1337SPRY domain
3238RNA polymerase Rpb1, domain 2
2237Guanylate kinase
54312Gelsolin repeat
16101036UBA/TS-N domain
25152060PHD-finger
11Filamin/ABP280 repeat
106622HECT-domain (ubiquitin-transferase)
3126Helix-hairpin-helix motif
2136MSP (Major sperm protein) domain
11Ribonuclease III domain
112Region in Clathrin and VPS
2125RanBP1 domain
146626PPIC-type PPIASE domain
52411Zn-finger in Ran binding protein and others
31151864Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11Poly(ADP-ribose) polymerase catalytic domain
112Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
36181468F-box domain
11Elongation factor 1 gamma, conserved domain
2114Calpain family cysteine protease
2014943CRAL/TRIO domain
297642BTB/POZ domain
1214Ricin-type beta-trefoil lectin domain
87217Voltage gated chloride channel
72615Caspase domain
125219GDSL-like Lipase/Acylhydrolase
2114Poly-adenylate binding protein, unique domain
1113POLO box duplicated region
21141752ABC transporter transmembrane region
1927349Integrase core domain
73414FAD binding domain
1124S-adenosyl-L-homocysteine hydrolase, NAD binding domain
22HAMP domain
1113ribosomal L5P family C-terminus
1491235Insulinase (Peptidase family M16)
58619Dehydrogenase E1 component
1113Lumazine binding domain
1010929Elongation factor G C-terminus
45514HMGL-like
44311DnaJ central domain
1041024Sulfotransferase domain
3227Ribosomal protein L1p/L10e family
74819Cation transporting ATPase, C-terminus
75618Cation transporter/ATPase, N-terminus
1113dUTPase
1113Aconitase C-terminal domain
94821Amino acid kinase family
1113N-(5'phosphoribosyl)anthranilate (PRA) isomerase
1113Acyl transferase domain
1113Urease beta subunit
1124Dihydrodipicolinate synthetase family
38223696haloacid dehalogenase-like hydrolase
112Glycosyl hydrolases family 2
421824Glycosyl hydrolases family 18
2114Proliferating cell nuclear antigen, N-terminal domain
2215Translation initiation factor IF-3, C-terminal domain
1113Adenylosuccinate synthetase
1214Asparaginase, N-terminal
74516Peptidase S24-like
3339Inorganic pyrophosphatase
213Glycosyl hydrolases family 16
1214NADH:flavin oxidoreductase / NADH oxidase family
42393-hydroxyacyl-CoA dehydrogenase, C-terminal domain
325Glycosyl hydrolase family 20, catalytic domain
73616HhH-GPD superfamily base excision DNA repair protein
1113AIR carboxylase
55111GMC oxidoreductase
72110Asparagine synthase
22Septin
33EF-1 guanine nucleotide exchange domain
83314Homoserine dehydrogenase
112Glutamyl-tRNAGlu reductase, dimerisation domain
52411tRNA synthetases class I (E and Q), catalytic domain
2125tRNA synthetases class I (R)
34310XPG N-terminal domain
147829Metallo-beta-lactamase superfamily
11F5/8 type C domain
3227Choline/Carnitine o-acyltransferase
3227Putative esterase
11Glycosyl hydrolase family 9
1113Ferrochelatase
4329Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1113Arginosuccinate synthase
1113Electron transfer flavoprotein FAD-binding domain
65415RNB domain
415Dioxygenase
22CNH domain
2125Diacylglycerol kinase catalytic domain
61613Dual specificity phosphatase, catalytic domain
134
64717PX domain
66517UBX domain
66315Carbon-nitrogen hydrolase
11Photosystem I reaction centre subunit VIII
22N-acetyltransferase
1113Prephenate dehydratase
99PKD domain
213Syntaxin
4228Pentapeptide repeats (8 copies)
44715Pumilio-family RNA binding repeat
63413Histone-like transcription factor (CBF/NF-Y) and archaeal histone
2226Pterin binding enzyme
2114ER lumen protein retaining receptor
2215Glycoprotease family
2114Histidinol dehydrogenase
34310impB/mucB/samB family
2114
1113Ribosomal L15
1113Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1113Ribosomal prokaryotic L21 protein
2125Ribosomal L28 family
1113Ribosomal L29 protein
1113Ribosomal L39 protein
1113Ribosomal S17
3227Ribulose-phosphate 3 epimerase family
11Translationally controlled tumour protein
1113Alanine racemase, C-terminal domain
31013AP2 domain
41202081RNA pseudouridylate synthase
1011930Histone deacetylase domain
22Glycosyltransferase family 10 (fucosyltransferase) C-term
5218POT family
54121783SET domain
64313Isochorismatase family
4318Permease family
1113Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
54514XPG I-region
11Acetokinase family
43411DNA photolyase
71412Nitroreductase family
54211Cytosol aminopeptidase family, catalytic domain
264333Sulfatase
11136,7-dimethyl-8-ribityllumazine synthase
3115Ribosomal protein S16
3227Acyl CoA binding protein
43411Cullin family
3126Elongation factor TS
112316FAD binding domain
44O-methyltransferase domain
2510843EamA-like transporter family
1113Small Multidrug Resistance protein
1113
1191131ThiF family
1113Ribosomal family S4e
84315Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
86620Ammonium Transporter Family
92415Sulfate permease family
9110MATH domain
43310Uncharacterized protein family UPF0004
1113Dehydratase family
2349Transaldolase/Fructose-6-phosphate aldolase
67619Mechanosensitive ion channel
2114GTP cyclohydrolase II
21143,4-dihydroxy-2-butanone 4-phosphate synthase
53412Adaptor complexes medium subunit family
138627Exonuclease
213Dipeptidyl peptidase IV (DPP IV) N-terminal region
1124NB-ARC domain
437Glycosyl hydrolase family 3 N terminal domain
1113Ribosomal protein L44
1113DNA-dependent RNA polymerase
1113FAD binding domain in molybdopterin dehydrogenase
1113Glycosyl transferase family 4
83314HCO3- transporter family
1113Nucleosome assembly protein (NAP)
54615Synaptobrevin
1113GMP synthase C terminal domain
73313Adenosine/AMP deaminase
85215Oxidoreductase FAD-binding domain
3227Histidine biosynthesis protein
2237Glycosyltransferase family 20
2125UDP-glucose/GDP-mannose dehydrogenase family, central domain
1113DNA gyrase B subunit, carboxyl terminus
2226Carbamoyl-phosphate synthase small chain, CPSase domain
51410PAS fold
112
3339Probable molybdopterin binding domain
44311Sec1 family
3227GDP dissociation inhibitor
156223Sodium/hydrogen exchanger family
2125RNA polymerase Rpb3/RpoA insert domain
3115Inward rectifier potassium channel transmembrane domain
54514Initiation factor 2 subunit family
1113Electron transfer flavoprotein domain
11Uricase
2114Ribosomal S3Ae family
1113Ribosomal L27 protein
34411GTP1/OBG
3238Gamma-glutamyltranspeptidase
3238GrpE
43411TatD related DNase
2114Inhibitor of apoptosis-promoting Bax1
1113Eukaryotic DNA topoisomerase I, catalytic core
11NusB family
112Dynamin central region
116-O-methylguanine DNA methyltransferase, DNA binding domain
22Bacteriorhodopsin-like protein
3249Carboxyl transferase domain
77620UbiA prenyltransferase family
123DegT/DnrJ/EryC1/StrS aminotransferase family
52512Endoribonuclease L-PSP
1113SecA preprotein cross-linking domain
213Phosphorylase superfamily
11Cadherin cytoplasmic region
54312Cys/Met metabolism PLP-dependent enzyme
3115Glycosyl hydrolases family 31
1113NADH ubiquinone oxidoreductase, 20 Kd subunit
1616ABC-2 type transporter
75517Amino-transferase class IV
54514CDP-alcohol phosphatidyltransferase
11Calpain large subunit, domain III
2417ATP dependent DNA ligase domain
2226FMN-dependent dehydrogenase
3115Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
11133-beta hydroxysteroid dehydrogenase/isomerase family
415Glycosyl hydrolases family 38 N-terminal domain
43310Nitrite and sulphite reductase 4Fe-4S domain
2125Magnesium chelatase, subunit ChlI
2125Presenilin
2114KDPG and KHG aldolase
11Copper type II ascorbate-dependent monooxygenase, N-terminal domain
1113Ribosomal protein S18
2237Ubiquitin carboxyl-terminal hydrolase, family 1
325
1113Ribosomal protein S19e
2114Ribosomal protein S6e
11Receptor family ligand binding region
3339Transcription factor S-II (TFIIS)
112Surface antigen
1113emp24/gp25L/p24 family/GOLD
3238NifU-like domain
112Cyclin-dependent kinase regulatory subunit
213Dihydrodipicolinate reductase, N-terminus
11F-actin capping protein, beta subunit
4239Fructose-bisphosphate aldolase class-II
2114Semialdehyde dehydrogenase, NAD binding domain
2125DNA mismatch repair protein, C-terminal domain
235Alpha-L-fucosidase
2226Dephospho-CoA kinase
1135MAPEG family
1113G10 protein
5319Heme oxygenase
1113Succinate dehydrogenase/Fumarate reductase transmembrane subunit
11132-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
2316DNA topoisomerase
1113Elongation factor P (EF-P) OB domain
2114Glucose inhibited division protein A
3227Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
11Peptidase family U32
3216RNA 3'-terminal phosphate cyclase
878233' exoribonuclease family, domain 1
11tRNA-splicing ligase RtcB
2114tRNA pseudouridine synthase D (TruD)
213Coenzyme A transferase
106824SPFH domain / Band 7 family
63312Cytidylyltransferase family
2114Formamidopyrimidine-DNA glycosylase N-terminal domain
2215GDA1/CD39 (nucleoside phosphatase) family
66315GNS1/SUR4 family
1214Bacterial-like globin
1113Hydroxymethylglutaryl-coenzyme A synthase N terminal
112Inosine-uridine preferring nucleoside hydrolase
1113Ribosomal protein L21e
2114Ribosomal protein L36e
1113Ribosomal protein L6e
2114
3339RIO1 family
2114Ribosomal protein S21
224Tub family
2125Alanine racemase, N-terminal domain
3227Uncharacterized protein family UPF0016
4116Putative RNA methylase family UPF0020
4127PP-loop family
2114Shwachman-Bodian-Diamond syndrome (SBDS) protein
213SNO glutamine amidotransferase family
3115Translation initiation factor 1A / IF-1
213Copper amine oxidase, enzyme domain
3227Dihydroorotate dehydrogenase
11GPR1/FUN34/yaaH family
11Macrophage migration inhibitory factor (MIF)
112
7381816S rRNA methyltransferase RsmB/F
1113RNA polymerase Rpb5, C-terminal domain
1113RNA polymerase Rpb6
53412RNA polymerase Rpb3/Rpb11 dimerisation domain
2114RNA polymerases N / 8 kDa subunit
2226Ribosomal protein L17
1113Ribosomal protein L31e
1113Ribosomal protein L34e
1113Ribosomal protein S28e
3227Ribosomal protein S8e
1113Shikimate kinase
3216Uncharacterized protein family UPF0029
118625Dihydrouridine synthase (Dus)
53311Uroporphyrinogen decarboxylase (URO-D)
14510ubiE/COQ5 methyltransferase family
4239NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
314Beta-eliminating lyase
11Adenylate cyclase associated (CAP) N terminal
3328Casein kinase II regulatory subunit
82414Clathrin adaptor complex small chain
2327Coproporphyrinogen III oxidase
1124Dynein light chain type 1
2237Ergosterol biosynthesis ERG4/ERG24 family
1113DNA/RNA non-specific endonuclease
4116Formate/nitrite transporter
2114GTP cyclohydrolase I
44Glycine radical
64414HIT domain
2114Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
1113Phosphomannose isomerase type I
4138Protein prenyltransferase alpha subunit repeat
3317Pyridoxamine 5'-phosphate oxidase
112Ribosomal protein L19
2226Ribosomal protein L24e
1113Ribosomal protein L35Ae
76619Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
2114Ribosomal protein S21e
1113Ribosomal protein S7e
63312Translation initiation factor SUI1
4228Putative undecaprenyl diphosphate synthase
112Carbohydrate kinase
1113Thioredoxin-like [2Fe-2S] ferredoxin
1113SAICAR synthetase
44Xylose isomerase-like TIM barrel
2338Alanine dehydrogenase/PNT, C-terminal domain
4239Aldose 1-epimerase
1113Chorismate synthase
3227Cytochrome c/c1 heme lyase
316744FAD dependent oxidoreductase
2114Formate--tetrahydrofolate ligase
2114Fibrillarin
22LBP / BPI / CETP family, N-terminal domain
11Malate synthase
1113Ribosomal protein L19e
2215Ribosomal protein L9, N-terminal domain
1113Ribosomal protein S24e
2114Ribosomal protein S26e
1113Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
1127,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
112Prokaryotic cytochrome b561
112Phosphoenolpyruvate carboxykinase
1113Ribosomal protein L13e
1214Telomere recombination
112Glycosyl hydrolases family 35
3238CAP-Gly domain
2226
1113Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
11Creatinase/Prolidase N-terminal domain
1214DSBA-like thioredoxin domain
6129Pyruvate phosphate dikinase, PEP/pyruvate binding domain
4138Polypeptide deformylase
3115Pterin 4 alpha carbinolamine dehydratase
123mRNA capping enzyme, catalytic domain
108725OB-fold nucleic acid binding domain
52411Peptidase family S49
11111133Kelch motif
22Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
3339Ribonuclease HII
11KRAB box
111223
63312FYVE zinc finger
21145'-3' exonuclease, C-terminal SAM fold
112DHH family
52512Sec7 domain
327948NAD dependent epimerase/dehydratase family
112Porphobilinogen deaminase, dipyromethane cofactor binding domain
1157SIS domain
1124Helix-turn-helix
1124Phosphate transporter family
112Clathrin propeller repeat
66719JAB1/Mov34/MPN/PAD-1 ubiquitin protease
12101234PCI domain
11Astacin (Peptidase family M12A)
3238tRNA synthetases class I (C) catalytic domain
1161229Oxidoreductase family, NAD-binding Rossmann fold
3238tRNA synthetases class II core domain (F)
2226tRNA synthetases class II (A)
189835Putative GTPase activating protein for Arf
66517tRNA pseudouridine synthase
2226ENTH domain
21191656LSM domain
11R3H domain
64111Amidase
11BAH domain
1113Hsp33 protein
1113Peptidase family M13
53513Peptidase family M3
33410Peptidase family M1 domain
54312Peptidase family M41
43512Peptidase family M48
11NHL repeat
112ELM2 domain
1113Acetohydroxy acid isomeroreductase, catalytic domain
11D-mannose binding lectin
11MAGE family
4239Leishmanolysin
1113Uncharacterized protein family (UPF0051)
2226Eukaryotic porin
3148GRIP domain
33410Skp1 family, dimerisation domain
63211Cytidylyltransferase-like
22Pyroglutamyl peptidase
3238PUA domain
2125Class-II DAHP synthetase family
112LysM domain
88723S4 domain
1113PWI domain
77Proprotein convertase P-domain
62210IBR domain, a half RING-finger domain
11Type I 3-dehydroquinase
213Shikimate / quinate 5-dehydrogenase
46211582Transmembrane amino acid transporter protein
112Frataxin-like domain
2226GXGXG motif
16117FAD binding domain
112
4116V-type ATPase 116kDa subunit family
64212Glycosyl transferase family 8
2114Phosphoribosyl-AMP cyclohydrolase
2114Phosphoribosyl-ATP pyrophosphohydrolase
3238Phosphatidylinositol-4-phosphate 5-Kinase
2125Phosphoadenosine phosphosulfate reductase family
2226TruB family pseudouridylate synthase (N terminal domain)
1113Respiratory-chain NADH dehydrogenase 51 Kd subunit
2114ATP-NAD kinase
53311Iron-sulphur cluster biosynthesis
3115Polysaccharide deacetylase
11Transposase
1711735DHHC palmitoyltransferase
347Glycosyl hydrolase family 47
52281797PPR repeat
1113Adenosylmethionine decarboxylase
628GIY-YIG catalytic domain
5319CorA-like Mg2+ transporter protein
75517Cation efflux family
43310Peptidase family M20/M25/M40
22Bacterial extracellular solute-binding protein
227837ShK domain-like
213Peptidase family M23
105823Acyltransferase
263635MatE
77519DnaJ C terminal domain
2237Fumarylacetoacetate (FAA) hydrolase family
11Pyruvate ferredoxin/flavodoxin oxidoreductase
172726Spermine/spermidine synthase domain
234330FAD binding domain
415Natural resistance-associated macrophage protein
63312PAP2 superfamily
2248Aminomethyltransferase folate-binding domain
235MaoC like domain
3126Adenylylsulphate kinase
2226G-patch domain
85518Putative tRNA binding domain
34714GAF domain
22266-phosphofructo-2-kinase
2114NifU-like N terminal domain
219535Flavin containing amine oxidoreductase
34411Cyclin M transmembrane N-terminal domain
11O-methyltransferase
1113Glycine cleavage H-protein
426
1113Ribosomal protein S27a
931022Adaptin N terminal region
1113Protein phosphatase 2A regulatory B subunit (B56 family)
112123Chitin binding Peritrophin-A domain
1358263'-5' exonuclease
11Flavin reductase like domain
1214Proline dehydrogenase
325MutS domain I
139426Peptide methionine sulfoxide reductase
22Hpt domain
1225Choline/ethanolamine kinase
1113ATP phosphoribosyltransferase
2114Phosphotransferase enzyme family
93214SelR domain
112Methylmalonyl-CoA mutase
4228Conserved region in glutamate synthase
31154'-phosphopantetheinyl transferase superfamily
112Peptidase C13 family
3249Eukaryotic initiation factor 4E
2114NAD-dependent DNA ligase adenylation domain
1113Ribosomal protein L32
415CobQ/CobB/MinD/ParA nucleotide binding domain
2125Myo-inositol-1-phosphate synthase
2215Macro domain
112Ribosomal protein S27
1214SmpB protein
1113Diaminopimelate epimerase
11Proteolipid membrane potential modulator
1113SOR/SNZ family
2125Riboflavin kinase
11
1411833Rhomboid family
44Glycosyltransferase family 92
75820Sodium/calcium exchanger protein
33410Queuine tRNA-ribosyltransferase
224UTP--glucose-1-phosphate uridylyltransferase
123Transcriptional regulator
43512Smr domain
2114IPP transferase
1113Manganese-stabilising protein / photosystem II polypeptide
213Cobalamin-independent synthase, Catalytic domain
44210BolA-like protein
2237Ham1 family
53513FtsJ-like methyltransferase
1113Quinolinate phosphoribosyl transferase, C-terminal domain
22Nucleoside transporter
1171028Patatin-like phospholipase
22Dienelactone hydrolase family
73515STAS domain
3227Poly A polymerase head domain
11tRNA (Guanine-1)-methyltransferase
3227ATP-sulfurylase
2114Importin beta binding domain
35311Toprim domain
13087145MYND finger
11A20-like zinc finger
44Glycosyltransferase family 25 (LPS biosynthesis protein)
1113Acyl-CoA oxidase
4217Acyltransferase family
134724Sodium Bile acid symporter family
22263-dehydroquinate synthase
415Galactosyltransferase
21122053Lipase (class 3)
2428Ribosome recycling factor
4228Divalent cation transporter
11UreD urease accessory protein
1113Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
1113Ribosomal L22e protein family
1113Ribosomal L27e protein family
1113Ribosomal L28e protein family
1113Ribosomal L29e protein family
1113Ribosomal L37ae protein family
1113Ribosomal L38e protein family
112RimM N-terminal domain
11Ribosomal L32p protein family