PFAM Domains • Kalaharituber pfeilii F3 v1.0
Annotations/GenomesAscim1Ascni1Chove1Kalpfe1Morco1Morimp1Pyrco1Sarco1Terbo2Tubme1Wilmi1TotalAnnotation Description
PFAMs
7,1786,2267,7818,9117,2227,1727,0498,0236,3425,8997,42179,224
12147 transmembrane receptor (rhodopsin family)
227 transmembrane receptor (Secretin family)
4741594638384144414555495ATPase family associated with various cellular activities (AAA)
3132323333333434283529354ABC transporter
4444444544445ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
1414151615141515141614162Elongation factor Tu GTP binding domain
91089998998997Helix-loop-helix DNA-binding domain
5463655433448Hsp20/alpha crystallin family
781015778979996Hsp70 protein
710228111110891111118KH domain
111111111110SH2 domain
2320201320192221212023222SH3 domain
910101010101011101110111Actin
1245649125270241210230128173072,099Ankyrin repeat
1124PAN domain
7787877977781ADP-ribosylation factor family
5337342843345Eukaryotic aspartyl protease
4444444444444Cyclic nucleotide-binding domain
123Cytochrome b/b6/petB
1111111111111Cytochrome c
1331333313529Double-stranded RNA binding motif
171724416161816161717178EF hand
1111121121124Fe-4S binding domain
2121222332222Fibronectin type III domain
6612498719681095Glutathione S-transferase, C-terminal domain
1211222112217Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
4354454354546Homeodomain
2222222222222lactate/malate dehydrogenase, NAD binding domain
5465545456453Myosin head (motor domain)
5728413335384591172650461Cytochrome P450
948912212215615498145101931401,314Protein kinase domain
9101081313131481012120Pyridine nucleotide-disulphide oxidoreductase
2325272726252626262535291Ras family
1213141315151617111216154Response regulator receiver domain
3575412494796RNase H
6365665965676574646269719RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
123Reverse transcriptase (RNA-dependent DNA polymerase)
112Serpin (serine protease inhibitor)
2233344432434Copper/zinc superoxide dismutase (SODC)
2222223222324Iron/manganese superoxide dismutases, alpha-hairpin domain
327121287101010712127Subtilase family
2014302541413440181827308Sugar (and other) transporter
889108912119810102Thioredoxin
3221222222222Trypsin
4454554446449Tubulin/FtsZ family, GTPase domain
6262322537644von Willebrand factor type A domain
69505623696856735741104666Zinc finger, C2H2 type
403840248444874453653468Zinc finger, C3HC4 type (RING finger)
351328391412252499181Zinc knuckle
2223222242225Protein-tyrosine phosphatase
3643493153545098294546534short chain dehydrogenase
2016202020202443181428243Zinc-binding dehydrogenase
4654555554553Thiolase, N-terminal domain
42463332154762Beta-ketoacyl synthase, N-terminal domain
44925545434492Fe-2S iron-sulfur cluster binding domain
1111111111111Enolase, C-terminal TIM barrel domain
1146Cytochrome C and Quinol oxidase polypeptide I
1113Cytochrome C oxidase subunit II, periplasmic domain
78798810987889Glutamine amidotransferase class-I
101011101010109101210112TCP-1/cpn60 chaperonin family
1113ATP synthase A chain
4332333633336Glutamine synthetase, catalytic domain
1111221111113Triosephosphate isomerase
1313151613131412121518154E1-E2 ATPase
8811988881091198Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
3172664437548Alpha amylase, catalytic domain
2222213222222Phorbol esters/diacylglycerol binding domain (C1 domain)
11Metallothionein
687127791278790Bacterial transferase hexapeptide (six repeats)
4546444444447tRNA synthetases class I (I, L, M and V)
7778787777779Cyclin, N-terminal domain
779159913223310107Carboxylesterase family
3444444344442DNA polymerase family B
3533333444338ATP synthase subunit C
1111112221215Peroxidase
313123321221Beta-lactamase
4334334433337C-5 cytosine-specific DNA methylase
11114NADH dehydrogenase
2222251822232326232121246Calcineurin-like phosphoesterase
84810131271263386Cellulase (glycosyl hydrolase family 5)
66666661086672tRNA synthetases class II (D, K and N)
3535363535384037373434396Mitochondrial carrier protein
111115recA bacterial DNA recombination protein
1212111614141514121016146Aminotransferase class I and II
88848891187988Phosphoribosyl transferase domain
1111121312121114121011129Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111121112Phosphoglycerate kinase
2223222222223Ribosomal protein S4/S9 N-terminal domain
2222222222222Ribosomal protein S12/S23
1111111111111Chaperonin 10 Kd subunit
101112911121213121213127C2 domain
1920211019191817221819202PH domain
599107781199690bZIP transcription factor
91113121212131391012126Aldehyde dehydrogenase family
6173705975707779535676749Fungal Zn(2)-Cys(6) binuclear cluster domain
1818191820202219171919209Cytochrome b5-like Heme/Steroid binding domain
2132333322226Oxidoreductase molybdopterin binding domain
989711109108911101Oxidoreductase NAD-binding domain
2922182925252625211939278SNF2 family N-terminal domain
2222222222222Ribosomal protein S7p/S5e
2023232423232124242125251Ubiquitin-conjugating enzyme
5558555665560Isocitrate/isopropylmalate dehydrogenase
2221222222221Ribosomal Proteins L2, RNA binding domain
1111111211112Hsp90 protein
2222222222222Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111121111112Dihydrofolate reductase
11574665343357Chitin recognition protein
3321338512536Cysteine-rich secretory protein family
1111111111111Ribosomal protein S3, C-terminal domain
12333221118Cupin
3332332322430Annexin
1143332123326Eukaryotic-type carbonic anhydrase
11Chalcone and stilbene synthases, N-terminal domain
33333343333342-oxoacid dehydrogenases acyltransferase (catalytic domain)
4334443433338Catalase
7111111111117Disintegrin
224UDP-glucoronosyl and UDP-glucosyl transferase
5445555453651Aminotransferase class-III
2222222322223Ribosomal protein S19
1111111111111DNA gyrase B
4444444454445Thiamine pyrophosphate enzyme, central domain
3333333334334Lyase
2222332222224Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111111111111Adenylate and Guanylate cyclase catalytic domain
11Atrial natriuretic peptide
1111111111111ATP synthase delta (OSCP) subunit
1111111111111Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111111111Indole-3-glycerol phosphate synthase
1214Aromatic amino acid lyase
1112111211113Pyruvate kinase, barrel domain
10910910101010101010108Kinesin motor domain
3126272828282728282626303DnaJ domain
1414141415151415141414157Proteasome subunit
3231222512326Major intrinsic protein
1111111111111ATP synthase
1122331212119Glycosyl hydrolase family 1
11111111111113'5'-cyclic nucleotide phosphodiesterase
111111111110Profilin
2232221222222Ribosomal protein L22p/L17e
2223222222223Ribosomal protein L14p/L23e
2213141915151021121216169Ubiquitin family
3444333434338Cofilin/tropomyosin-type actin-binding protein
333333223333114-3-3 protein
5332444533440Alkaline phosphatase
221212221116Zinc carboxypeptidase
181319142322222610818193Aldo/keto reductase family
141520918191914131618175Myb-like DNA-binding domain
4444444444444Forkhead domain
111111111110Glycosyl hydrolases family 32 N-terminal domain
1112111111112Ribosomal protein L16p/L10e
3222112322222Ribosomal protein S14p/S29e
4544333344340FKBP-type peptidyl-prolyl cis-trans isomerase
111111111110Glutathione peroxidase
222332222222
4543554654550Flavodoxin
1111111211112Calreticulin family
26881211121399415127Common central domain of tyrosinase
76257886645587Aminotransferase class-V
1111111211112Ribonucleotide reductase, small chain
4942426048514643453545506DEAD/DEAH box helicase
90727196808182798165100897Helicase conserved C-terminal domain
1171111211118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222222222Ribosomal protein L23
1111111111111Pyridoxal-dependent decarboxylase, C-terminal sheet domain
221111231216Ribosomal protein L5
4566669644662Pyridoxal-dependent decarboxylase conserved domain
3334333333334Citrate synthase, C-terminal domain
5555555555555GHMP kinases N terminal domain
4655556552553Biotin carboxylase, N-terminal domain
1111111112112Tryptophan synthase alpha chain
910999910118911104Pyridoxal-phosphate dependent enzyme
1311131313121317121111139NUDIX domain
5533445633546pfkB family carbohydrate kinase
43441612126Glycosyl hydrolases family 28
2222222322223Ribosomal protein L3
2222222322223Ribosomal protein L11, RNA binding domain
11812101111911111210116Histidine phosphatase superfamily (branch 1)
1112111114115Thymidylate synthase
21313111Lipoxygenase
4444444544445ATP synthase alpha/beta chain, C terminal domain
5546655556658Calponin homology (CH) domain
5553554444549Glutamine amidotransferases class-II
3222232122223Ribosomal protein S15
11147Thaumatin family
1111111111111Fructose-1-6-bisphosphatase, N-terminal domain
1111111111111Ribonucleotide reductase, all-alpha domain
2222222422224Ribosomal protein S2
2232232222224SRF-type transcription factor (DNA-binding and dimerisation domain)
7779997878785GATA zinc finger
131418617172023111626181Amino acid permease
3444442536443Prolyl oligopeptidase family
1222222122119Ribosomal protein L30p/L7e
4444666634552Histidine phosphatase superfamily (branch 2)
1111111111111Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4444444444444Aconitase family (aconitate hydratase)
6134333311129Glycosyl hydrolase family 10
6445554443448Glycosyl hydrolases family 17
2222222222222Ribosomal protein S5, N-terminal domain
1111111111111Nucleoside diphosphate kinase
1214Tetraspanin family
16310Galactoside-binding lectin
2222224412225Ribosomal protein S10p/S20e
3334333343335Arrestin (or S-antigen), N-terminal domain
11Interleukin-1 / 18
1111111111111Phosphoglucose isomerase
1111111111111Carbohydrate phosphorylase
1111111111111SecY translocase
1111111111111Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222122222221Ribosomal protein L6
3433333333536Polyprenyl synthetase
3323334432333Hexokinase
45686648541066Dynamin family
1111111311113Transcription factor TFIID (or TATA-binding protein, TBP)
3353444334440Rieske [2Fe-2S] domain
11439Proton-conducting membrane transporter
7877778774776Biotin-requiring enzyme
1111111111111Phosphofructokinase
2122221221118Ribosomal protein S17
1111111111111Hydroxymethylglutaryl-coenzyme A reductase
3334333333334FGGY family of carbohydrate kinases, N-terminal domain
11Prion/Doppel alpha-helical domain
7776667776773Enoyl-CoA hydratase/isomerase
2222222222222Ribosomal protein S9/S16
5432444622339Transcription factor TFIIB repeat
6556665855663Cytidine and deoxycytidylate deaminase zinc-binding region
1111111111111Molybdopterin oxidoreductase
126467778531479Chromo (CHRromatin Organisation MOdifier) domain
2222222221221Phosphatidylinositol-specific phospholipase C, Y domain
3333442223332Phosphatidylinositol-specific phospholipase C, X domain
4664666566459D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2212222212220Malic enzyme, N-terminal domain
22222221112196-phosphogluconate dehydrogenase, C-terminal domain
7467444635757Multicopper oxidase
111115Granulin
101077111011108613103WW domain
1222112211217Ribosomal RNA adenine dimethylase
23431316Yeast PIR protein repeat
1071121071091041051081151201001081,195WD domain, G-beta repeat
4455443345445Heavy-metal-associated domain
4435334444442Adenylate kinase
3233321223125Phosphoglucomutase/phosphomannomutase, C-terminal domain
2222223222223Ribosomal protein S8
2212111321218Ribosomal protein S11
4443444544646LIM domain
112Matrixin
1233323312124Regulator of chromosome condensation (RCC1) repeat
2222222221221Ribosomal protein S13/S18
112NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2222222332224chorismate binding enzyme
633333443333860s Acidic ribosomal protein
4444444464446Prenyltransferase and squalene oxidase repeat
4565447556556Protein kinase C terminal domain
111111111110Single-strand binding protein family
1111111111111S-adenosylmethionine synthetase, N-terminal domain
6668666686670Bromodomain
599688810611989Acyl-CoA dehydrogenase, C-terminal domain
1513161516161516151415166Ubiquitin carboxyl-terminal hydrolase
111111111110Ribosomal protein L36
11111229Ribonuclease T2 family
3334333533336HSF-type DNA-binding
2222223321223SRP54-type protein, GTPase domain
1111111111111Urease alpha-subunit, N-terminal domain
4363543733647Serine carboxypeptidase
88108888898891Phosphatidylinositol 3- and 4-kinase
1111221211114Transketolase, thiamine diphosphate binding domain
213Glycosyl hydrolases family 11
2222224222325Inositol monophosphatase family
4444445544446Glutaredoxin
2222222232324Isocitrate lyase family
2222222222222Serine hydroxymethyltransferase
1311221211217Iron-containing alcohol dehydrogenase
1112223121218Ribosomal protein L10
3543445533544KOW motif
111111111110Ribosomal protein L34
2233332232227RF-1 domain
1223222222222Sodium:solute symporter family
1111111121112Imidazoleglycerol-phosphate dehydratase
1111221111113DNA polymerase family A
1111111111111IMP dehydrogenase / GMP reductase domain
1111111111111Glucose-6-phosphate dehydrogenase, NAD binding domain
5565555754557Protein phosphatase 2C
4334444644343Nucleotidyl transferase
221234333124Carbonic anhydrase
121222121216Phosphoribulokinase / Uridine kinase family
4454445554448Fatty acid desaturase
6666666666868MutS domain V
1111111111111Delta-aminolevulinic acid dehydratase
1232444333231Arginase family
6676666676668MCM P-loop domain
1212112211216Squalene/phytoene synthase
87107101011889795FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
1619202824242626152120239AMP-binding enzyme
5333333333335G-protein alpha subunit
58686787108881HMG (high mobility group) box
112NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
79107121212127911108His Kinase A (phospho-acceptor) domain
2332333233330Armadillo/beta-catenin-like repeat
2023392825243024363851338Tetratricopeptide repeat
3232232521227Ion transport protein
1111111111111DNA gyrase/topoisomerase IV, subunit A
981371091112121010111BRCA1 C Terminus (BRCT) domain
5564555665557Glycosyl transferases group 1
2222333222326Glycosyl transferase family 2
1122112122116SAM domain (Sterile alpha motif)
1111111111111linker histone H1 and H5 family
1111111111111Ribosomal protein L7/L12 C-terminal domain
11411010252339Pectate lyase
11111218ribonuclease
1111111111111Urease, gamma subunit
3453444333440CoA-ligase
56857781157675Phosphopantetheine attachment site
1222332332225Formyl transferase
6688777877778Metallopeptidase family M24
131510215151411111016132Leucine Rich Repeat
2021211017202027151921211alpha/beta hydrolase fold
3333333333333RNA polymerase Rpb2, domain 6
4344444444443PB1 domain
2222222222222Staphylococcal nuclease homologue
1010101211111010111110116Rab-GTPase-TBC domain
1111111111111Tudor domain
1111111111111WH1 domain
5376455555555Zinc finger, ZZ type
2112221121217HRDC domain
1010107910109101010105CBS domain
2222222222222Ribosomal protein L13
2222222222121Ribosomal protein L4/L1 family
1111111121112Clp protease
4233444455341S1 RNA binding domain
1111111121112HIUase/Transthyretin family
3445443544545AhpC/TSA family
4444554443445tRNA synthetases class I (W and Y)
1122112121234UvrD/REP helicase N-terminal domain
4566554565657Rhodanese-like domain
2222222221221Universal stress protein family
2125211724222036161322237Acetyltransferase (GNAT) family
2111111111112SecE/Sec61-gamma subunits of protein translocation complex
1111111111111C-terminal regulatory domain of Threonine dehydratase
2222222322223AIR synthase related protein, N-terminal domain
8887888989889tRNA synthetase class II core domain (G, H, P, S and T)
2212222221220SpoU rRNA Methylase family
11Phage integrase family
2222222222222Tetrapyrrole (Corrin/Porphyrin) Methylases
1211111211113Glycosyl transferase family, a/b domain
11TonB dependent receptor
1111111119PDZ domain
2233