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PFAM Domains • Trichoderma arundinaceum IBT 40837
Annotations/GenomesTriaru1Trias1Triat2Triatr1Triatro1Triatrob1Triatrov1Trici4Trigam1Trigui1Triha1Trilo3Trilon1Tripar1Trire2TrireRUTC30_1TriviGv29_8_2TotalAnnotation Description
PFAMs
10,8689,1179,14011,41611,4589,34411,5087,92911,20511,89310,1857,5219,6259,2996,5077,8429,844164,701
117 transmembrane receptor (rhodopsin family)
1222222221187 transmembrane receptor (Secretin family)
4746515353435346515652444746444649827ATPase family associated with various cellular activities (AAA)
5456474746464748485861474745464762852ABC transporter
8444444364434444472ATP synthase alpha/beta family, nucleotide-binding domain
1514131515151514151615141514141414247Elongation factor Tu GTP binding domain
91210101091081110119999910165Helix-loop-helix DNA-binding domain
3555545353433333567Hsp20/alpha crystallin family
13881615111681414981213788188Hsp70 protein
899779710888987889139KH domain
111111118SH2 domain
1522211212121222141322221414242222295SH3 domain
1010101010101091010101010107109165Actin
441171353638163782485015480202163821711,194Ankyrin repeat
1423213221421122437PAN domain
57777777677777777116ADP-ribosylation factor family
2220202222212219232522161716161721341Eukaryotic aspartyl protease
4444444444444444468Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
1111111111111111117Cytochrome c
111111121111Double-stranded RNA binding motif
2181822221612171622201618156EF hand
1111111111111134Fe-4S binding domain
11Intermediate filament protein
143221221122112229Fibronectin type III domain
2222222322222222235Globin
10182315161215131818311397101427269Glutathione S-transferase, C-terminal domain
3111121112211111223Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
413105545745108535811112Homeodomain
2333323233322222343lactate/malate dehydrogenase, NAD binding domain
11Lipocalin / cytosolic fatty-acid binding protein family
5454454455444544575Myosin head (motor domain)
111726670707070737111011666707169681181,361Cytochrome P450
108105112130132981331071111201111011131141061081261,935Protein kinase domain
1522221717151715172025151413141525298Pyridine nucleotide-disulphide oxidoreductase
2424242525252523242524222524232425411Ras family
1315151516121513151414131312131314235Response regulator receiver domain
4234414273333323556RNase H
5359605354525455535258565253595857938RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
714111116Reverse transcriptase (RNA-dependent DNA polymerase)
3223323132223322240Copper/zinc superoxide dismutase (SODC)
2222222222322223337Iron/manganese superoxide dismutases, alpha-hairpin domain
3527365555295418464334152123151529550Subtilase family
86787480808380608996905462697659861,302Sugar (and other) transporter
1112121313111311121313111211111014203Thioredoxin
1221121212321112227Trypsin
5555555555555566587Tubulin/FtsZ family, GTPase domain
145111414424436von Willebrand factor type A domain
146462161992053151873551714674863627Zinc finger, C2H2 type
4393855253954393954323738340Zinc finger, C3HC4 type (RING finger)
65923425661033552985Zinc knuckle
2333333233322222243Protein-tyrosine phosphatase
1591601701591571361601241671841991161101111181201812,531short chain dehydrogenase
817988777660775979901064942395351921,198Zinc-binding dehydrogenase
5657767577555565598Thiolase, N-terminal domain
3320222322262318233032161517171626379Beta-ketoacyl synthase, N-terminal domain
35533235334533555652Fe-2S iron-sulfur cluster binding domain
11114Papain family cysteine protease
1222212112111111224Enolase, C-terminal TIM barrel domain
11125Cytochrome C and Quinol oxidase polypeptide I
98888108989118997910148Glutamine amidotransferase class-I
1010101010101010101010101010101010170TCP-1/cpn60 chaperonin family
2222232225622222444Glutamine synthetase, catalytic domain
2222222222222222234Triosephosphate isomerase
2317162020192016212218182221161719325E1-E2 ATPase
68788788799788789132Core histone H2A/H2B/H3/H4
1113Copper binding proteins, plastocyanin/azurin family
5544464486644444581Alpha amylase, catalytic domain
2122222122122221230Phorbol esters/diacylglycerol binding domain (C1 domain)
1010127868898106588812143Bacterial transferase hexapeptide (six repeats)
6446666366435563483tRNA synthetases class I (I, L, M and V)
68877677778777779122Cyclin, N-terminal domain
2120192020232014213033141313121328334Carboxylesterase family
4444444444444444468DNA polymerase family B
4466646364444444477ATP synthase subunit C
76666766688566667108Peroxidase
1016191920142071720198898918241Beta-lactamase
222222222222112230C-5 cytosine-specific DNA methylase
2429302727252725272727282325272632456Calcineurin-like phosphoesterase
11111011119117111196884510153Cellulase (glycosyl hydrolase family 5)
88788789989788878135tRNA synthetases class II (D, K and N)
3338383938313934373640353634353638617Mitochondrial carrier protein
2121202222222218252528181919161829365Aminotransferase class I and II
781076578858855888121Phosphoribosyl transferase domain
10101010101010910101010109101010168Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111111111111117Phosphoglycerate kinase
2222212222212222232Ribosomal protein S4/S9 N-terminal domain
2222222222222222335Ribosomal protein S12/S23
2444414133311111240Bacterial regulatory helix-turn-helix proteins, AraC family
1111111111111111117Chaperonin 10 Kd subunit
11141210991013991415910141313194C2 domain
8191788982088191688191917219PH domain
1512121718171611191813121816111414253bZIP transcription factor
3526252524342523274239191921202031455Aldehyde dehydrogenase family
154325276313314853202142082114052132051431922113104,099Fungal Zn(2)-Cys(6) binuclear cluster domain
2524242424212421242527192119212125389Cytochrome b5-like Heme/Steroid binding domain
4433343434444444463Oxidoreductase molybdopterin binding domain
1920181616141618162021161311141823289Oxidoreductase NAD-binding domain
2726273029213024262728252624252427446SNF2 family N-terminal domain
2222222222222222234Ribosomal protein S7p/S5e
1819202020172019202020212019202020333Ubiquitin-conjugating enzyme
97777777879777778125Isocitrate/isopropylmalate dehydrogenase
2222222222222222234Ribosomal Proteins L2, RNA binding domain
1111111111111111117Hsp90 protein
2222222222212222233Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111111111111117Dihydrofolate reductase
165688133511222559Chitin recognition protein
2333323332333333348Cysteine-rich secretory protein family
111111111111111116Ribosomal protein S3, C-terminal domain
4455545354444333469Cupin
3333334233322323247Annexin
1111111111111111117Eukaryotic-type carbonic anhydrase
33433333333333334532-oxoacid dehydrogenases acyltransferase (catalytic domain)
87777677887777777121Catalase
111111121111111117Disintegrin
61554526721542257UDP-glucoronosyl and UDP-glucosyl transferase
1110888989912118888810153Aminotransferase class-III
2222222222222222234Ribosomal protein S19
1111111111111111117DNA gyrase B
89888784988555459118Thiamine pyrophosphate enzyme, central domain
4434454444534333364Lyase
2222222222222122233Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111111111111111117Adenylate and Guanylate cyclase catalytic domain
1111111111111111117ATP synthase delta (OSCP) subunit
1111111111111111117Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111111111111117Indole-3-glycerol phosphate synthase
11111117Aromatic amino acid lyase
1111111111111111117Pyruvate kinase, barrel domain
1191098109910101010119111110167Kinesin motor domain
2525262625222526262526262625262625431DnaJ domain
1414141414141414141414141413141414237Proteasome subunit
76777677778776778118Major intrinsic protein
1111111111111111117ATP synthase
3244424233422222247Glycosyl hydrolase family 1
11111111111111111173'5'-cyclic nucleotide phosphodiesterase
1111111111111111117Profilin
2112222122112211126Ribosomal protein L22p/L17e
2222212222222222233Ribosomal protein L14p/L23e
91112910129108111213111181112179Ubiquitin family
4555555555545535581Cofilin/tropomyosin-type actin-binding protein
322333323322332234414-3-3 protein
2221121312322233335Alkaline phosphatase
5444444444444444469Zinc carboxypeptidase
4036363838373829404746282831272645610Aldo/keto reductase family
8141378881479151388141415183Myb-like DNA-binding domain
4444444444444444468Forkhead domain
21111219Glycosyl hydrolases family 32 N-terminal domain
2112222122112211126Ribosomal protein L16p/L10e
222212222222212230Ribosomal protein S14p/S29e
3333333333343234352FKBP-type peptidyl-prolyl cis-trans isomerase
1111111111111111117Glutathione peroxidase
2222222216
88766667678765778115Flavodoxin
1111111111111111117Calreticulin family
3433323442333323452Common central domain of tyrosinase
898889888910788388135Aminotransferase class-V
1111111111111111117Ribonucleotide reductase, small chain
4738374342404338484438364242493836701DEAD/DEAH box helicase
74727473726673737373797572707572731,239Helicase conserved C-terminal domain
1111111111111111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222222222222234Ribosomal protein L23
1111111111111111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2222222122212222232Ribosomal protein L5
89888785987456667119Pyridoxal-dependent decarboxylase conserved domain
3323333233223322244Citrate synthase, C-terminal domain
5555555555535555583GHMP kinases N terminal domain
5566676468735555796Biotin carboxylase, N-terminal domain
1111111111111111117Tryptophan synthase alpha chain
1614131313121312131515121211121215223Pyridoxal-phosphate dependent enzyme
11'Paired box' domain
1618181919141915161621151614151622289NUDIX domain
4445545645465446580pfkB family carbohydrate kinase
5566656566443543685Glycosyl hydrolases family 28
43343344432Luciferase-like monooxygenase
2222222222222222234Ribosomal protein L3
2222222222222222234Ribosomal protein L11, RNA binding domain
12111110111111111114149111061112186Histidine phosphatase superfamily (branch 1)
1111111111111111117Thymidylate synthase
111111112111Lipoxygenase
8444444364434444472ATP synthase alpha/beta chain, C terminal domain
5555555555544355581Calponin homology (CH) domain
4452222523653345663Glutamine amidotransferases class-II
2222222222222222234Ribosomal protein S15
111111111111111116Thaumatin family
2222212222222222233Fructose-1-6-bisphosphatase, N-terminal domain
1111111111111111117Ribonucleotide reductase, all-alpha domain
2222222222222222234Ribosomal protein S2
2322424232222222240SRF-type transcription factor (DNA-binding and dimerisation domain)
78867578788877688123GATA zinc finger
1936351818171835182139321517333336440Amino acid permease
6335545467744514578Prolyl oligopeptidase family
1222212222222222232Ribosomal protein L30p/L7e
88877776678766478117Histidine phosphatase superfamily (branch 2)
1111111111111111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6666666566744444692Aconitase family (aconitate hydratase)
1212112132211111225Glycosyl hydrolase family 10
1331111311221112328Glycosyl hydrolases family 17
2222222222222222234Ribosomal protein S5, N-terminal domain
1111111111111111117Nucleoside diphosphate kinase
111216Tetraspanin family
1112212122112211124Ribosomal protein S10p/S20e
3323333333233333248Arrestin (or S-antigen), N-terminal domain
1111111111111111117Phosphoglucose isomerase
1111111111111111117Carbohydrate phosphorylase
1111111111111111117SecY translocase
1112211111111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222322222222235Ribosomal protein L6
6433333434433333358Polyprenyl synthetase
5444444345544444571Hexokinase
11101012128129111111810109911174Dynamin family
1211111111111111118Transcription factor TFIID (or TATA-binding protein, TBP)
2443323423443244455Rieske [2Fe-2S] domain
111111111110Phytochrome region
22Proton-conducting membrane transporter
7788888781096776710131Biotin-requiring enzyme
1111111111111111117Phosphofructokinase
2222222222222222234Ribosomal protein S17
1111111111111111117Hydroxymethylglutaryl-coenzyme A reductase
3333333333333333351FGGY family of carbohydrate kinases, N-terminal domain
1715151515171515172222141411121318267Enoyl-CoA hydratase/isomerase
2222222222222222234Ribosomal protein S9/S16
2222232223222222236Transcription factor TFIIB repeat
66777675777566666107Cytidine and deoxycytidylate deaminase zinc-binding region
2111111111122111120Molybdopterin oxidoreductase
86766467767677169106Chromo (CHRromatin Organisation MOdifier) domain
4444444244444444466Phosphatidylinositol-specific phospholipase C, Y domain
6556646366556665692Phosphatidylinositol-specific phospholipase C, X domain
101010131381381313135655612163D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2222222222222222234Malic enzyme, N-terminal domain
1111116PEP-utilising enzyme, mobile domain
12222221222111111266-phosphogluconate dehydrogenase, C-terminal domain
81010111181191088788889152Multicopper oxidase
101111101099111010108109101010168WW domain
1112222121112211124Ribosomal RNA adenine dimethylase
111111111110Yeast PIR protein repeat
11312813813413897139118124121147114113107123121148