PFAM Domains • Stemphylium lycopersici CIDEFI-216
Annotations/GenomesAltal1Altbr1Cocca1CocheC4_1CocheC5_3Coclu2Cocmi1Cocsa1Cocvi1Decga1Pyrtr1Pyrtt1Settu1Settur1Stely1TotalAnnotation Description
PFAMs
9,6115,9038,9079,0349,2958,8208,7108,8298,9987,9316,7138,5168,6618,65710,211128,796
11111111197 transmembrane receptor (rhodopsin family)
117 transmembrane receptor (Secretin family)
503240414140394042443946393845616ATPase family associated with various cellular activities (AAA)
413743424242384139364040393844602ABC transporter
44444444444444460ATP synthase alpha/beta family, nucleotide-binding domain
141314141414141414141213141416208Elongation factor Tu GTP binding domain
121113131314151615121112141412197Helix-loop-helix DNA-binding domain
31333333331233340Hsp20/alpha crystallin family
7677877777777710108Hsp70 protein
788888888998888121KH domain
112Ribulose bisphosphate carboxylase large chain, catalytic domain
1111111111111114SH2 domain
232123232223232323222423232313332SH3 domain
1091010101010101010710101010146Actin
653572878886707579715852535415960Ankyrin repeat
44778785842234174PAN domain
777777777777777105ADP-ribosylation factor family
1181719221314151691213121312206Eukaryotic aspartyl protease
42444444444444458Cyclic nucleotide-binding domain
1121117Cytochrome b(C-terminal)/b6/petD
112116Cytochrome b/b6/petB
11111111111111115Cytochrome c
12111111112122119Double-stranded RNA binding motif
17181818181720181815191717172249EF hand
121112111112111184Fe-4S binding domain
32344233323222139Fibronectin type III domain
11111111111111115Globin
1610889881010764889129Glutathione S-transferase, C-terminal domain
11111111111111115Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11598898889910885123Homeodomain
44444444433344558lactate/malate dehydrogenase, NAD binding domain
46545444445544567Myosin head (motor domain)
124631431491561061241271386787981331321231,770Cytochrome P450
127841081101151031041101081301041121061071071,635Protein kinase domain
14916171716141316131214151511212Pyridine nucleotide-disulphide oxidoreductase
262225252625232425242223252524364Ras family
272125252724252525232426252526373Response regulator receiver domain
2271094553552RNase H
564958585860585759615856585950855RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
312641246Reverse transcriptase (RNA-dependent DNA polymerase)
21222222222222431Copper/zinc superoxide dismutase (SODC)
22222222222222230Iron/manganese superoxide dismutases, alpha-hairpin domain
177131112111212141299121317181Subtilase family
8974697070716668695288626464871,063Sugar (and other) transporter
1110111213111111111099121212165Thioredoxin
55342433322233246Trypsin
44444445444444461Tubulin/FtsZ family, GTPase domain
31335444433444251von Willebrand factor type A domain
825661646858605965657055616819911Zinc finger, C2H2 type
55355454545156515465436051564743Zinc finger, C3HC4 type (RING finger)
5164212211631023201239138Zinc knuckle
22222222222222230Protein-tyrosine phosphatase
16998132136132140125127127921131131311321201,887short chain dehydrogenase
715271696959666265446063686756942Zinc-binding dehydrogenase
69677666667666696Thiolase, N-terminal domain
141029272818222125142326313220340Beta-ketoacyl synthase, N-terminal domain
646666766466664852Fe-2S iron-sulfur cluster binding domain
112Papain family cysteine protease
11111111111111115Enolase, C-terminal TIM barrel domain
111227Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
878888888769999120Glutamine amidotransferase class-I
101010101010101010101011101010151TCP-1/cpn60 chaperonin family
111115ATP synthase A chain
43333333333333346Glutamine synthetase, catalytic domain
22222222222222230Triosephosphate isomerase
181316161917171819161615171720254E1-E2 ATPase
85891188688317998143Core histone H2A/H2B/H3/H4
111111129Copper binding proteins, plastocyanin/azurin family
66666776666766693Alpha amylase, catalytic domain
22111212122212224Phorbol esters/diacylglycerol binding domain (C1 domain)
869887789788988118Bacterial transferase hexapeptide (six repeats)
47333433338544562tRNA synthetases class I (I, L, M and V)
757997787787997113Cyclin, N-terminal domain
352425282925252825172222232333384Carboxylesterase family
4444444444444DNA polymerase family B
43444444444444459ATP synthase subunit C
11Legume lectin domain
777888777577776105Peroxidase
14887767884785511113Beta-lactamase
32222322233333237C-5 cytosine-specific DNA methylase
2114NADH dehydrogenase
292325262825262626272629272622391Calcineurin-like phosphoesterase
131099988101010697718143Cellulase (glycosyl hydrolase family 5)
877778777777777107tRNA synthetases class II (D, K and N)
393645414140424144394041404136606Mitochondrial carrier protein
11recA bacterial DNA recombination protein
1971617172115171614915161616231Aminotransferase class I and II
96988889910991094125Phosphoribosyl transferase domain
121112121312121112121212121210177Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11Ribosome inactivating protein
11111111111111115Phosphoglycerate kinase
22222222222222230Ribosomal protein S4/S9 N-terminal domain
22222222222212229Ribosomal protein S12/S23
12111211111Bacterial regulatory helix-turn-helix proteins, AraC family
11111111111111115Chaperonin 10 Kd subunit
131112121213121212121112111210177C2 domain
181619202221191918181820191910276PH domain
106999999118898812134bZIP transcription factor
222025272725262427152122191922341Aldehyde dehydrogenase family
2407917218519217917918218314792107160180972,374Fungal Zn(2)-Cys(6) binuclear cluster domain
241824242424262424202224262620350Cytochrome b5-like Heme/Steroid binding domain
43444344443333353Oxidoreductase molybdopterin binding domain
16917181815181816131016161613229Oxidoreductase NAD-binding domain
272125252525272426252626242425375SNF2 family N-terminal domain
22222222222222230Ribosomal protein S7p/S5e
272121222225222222262125252525351Ubiquitin-conjugating enzyme
777776778677667102Isocitrate/isopropylmalate dehydrogenase
22222222222222230Ribosomal Proteins L2, RNA binding domain
11111111111111115Hsp90 protein
21222222222222229Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111111115Dihydrofolate reductase
14912111012111112965555137Chitin recognition protein
43111231132223332Cysteine-rich secretory protein family
12111111111111116Ribosomal protein S3, C-terminal domain
73444464536666573Cupin
21222222222222128Annexin
21111111111111217Eukaryotic-type carbonic anhydrase
1111111111111114Chalcone and stilbene synthases, N-terminal domain
324343333333333462-oxoacid dehydrogenases acyltransferase (catalytic domain)
64444444445544565Catalase
11111111111111115Disintegrin
2158UDP-glucoronosyl and UDP-glucosyl transferase
961210109111212789888139Aminotransferase class-III
21222222222222128Ribosomal protein S19
11111111111111115DNA gyrase B
44766656653444474Thiamine pyrophosphate enzyme, central domain
44444444444444460Lyase
21222222222222229Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
31111111123233327Sodium:neurotransmitter symporter family
1111111111111114Adenylate and Guanylate cyclase catalytic domain
1111111111111114ATP synthase delta (OSCP) subunit
11111111111111115Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111111111115Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
111115Aromatic amino acid lyase
11111111111111115Pyruvate kinase, barrel domain
9101011111010912810109910148Kinesin motor domain
343029292930293029353230313126454DnaJ domain
141214141414141414141414141414208Proteasome subunit
976778656977888108Major intrinsic protein
11111111111111115ATP synthase
32333333313333342Glycosyl hydrolase family 1
11111111111111143'5'-cyclic nucleotide phosphodiesterase
11112111111111116Profilin
12111111111111217Ribosomal protein L22p/L17e
22222222222222230Ribosomal protein L14p/L23e
12109101112111110121112111110163Ubiquitin family
52555555552555468Cofilin/tropomyosin-type actin-binding protein
2322222222222233214-3-3 protein
65666666644566280Alkaline phosphatase
9108888888477888117Zinc carboxypeptidase
372226252527252927252132272729404Aldo/keto reductase family
13111515151314131516141316158206Myb-like DNA-binding domain
42444444444444458Forkhead domain
42333435313333346Glycosyl hydrolases family 32 N-terminal domain
11111111111111115Ribosomal protein L16p/L10e
31333333321333239Ribosomal protein S14p/S29e
55555555555555575FKBP-type peptidyl-prolyl cis-trans isomerase
11111111111111115Glutathione peroxidase
1111111111111114
868998897677887115Flavodoxin
123Protamine P1
1111111111111114Calreticulin family
21812121212119149610101112169Common central domain of tyrosinase
8388811888838999116Aminotransferase class-V
11111111111111115Ribonucleotide reductase, small chain
454441393939394040415247424149638DEAD/DEAH box helicase
7865757677757476737377807373711,116Helicase conserved C-terminal domain
11111111111111115EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222222222230Ribosomal protein L23
1111111111111114Pyridoxal-dependent decarboxylase, C-terminal sheet domain
22222222222222230Ribosomal protein L5
66666767666666692Pyridoxal-dependent decarboxylase conserved domain
22333332332222439Citrate synthase, C-terminal domain
55555555555555575GHMP kinases N terminal domain
777777777667777103Biotin carboxylase, N-terminal domain
11111111111111115Tryptophan synthase alpha chain
1181011141010101091014111110159Pyridoxal-phosphate dependent enzyme
161116151616151515151413151613221NUDIX domain
55655565645555678pfkB family carbohydrate kinase
86435344436566774Glycosyl hydrolases family 28
111111111111214Luciferase-like monooxygenase
23222222222222231Ribosomal protein L3
21222222221222127Ribosomal protein L11, RNA binding domain
151013121513131413141013121214193Histidine phosphatase superfamily (branch 1)
1111111111111114Thymidylate synthase
11133110Lipoxygenase
44444444444444460ATP synthase alpha/beta chain, C terminal domain
55555555554554472Calponin homology (CH) domain
56667565545555176Glutamine amidotransferases class-II
21223222222222129Ribosomal protein S15
11111111111111115Thaumatin family
22222122222222229Fructose-1-6-bisphosphatase, N-terminal domain
11111111111111115Ribonucleotide reductase, all-alpha domain
22223222222222231Ribosomal protein S2
22222222222322231SRF-type transcription factor (DNA-binding and dimerisation domain)
75677667665656691GATA zinc finger
452240393945413740273233323116519Amino acid permease
62578665542666781Prolyl oligopeptidase family
32333333332233342Ribosomal protein L30p/L7e
12612121212121212101012121212170Histidine phosphatase superfamily (branch 2)
11111111111111115Respiratory-chain NADH dehydrogenase, 30 Kd subunit
54444444444544563Aconitase family (aconitate hydratase)
75655655644455476Glycosyl hydrolase family 10
31222232232333235Glycosyl hydrolases family 17
22222222221222229Ribosomal protein S5, N-terminal domain
11111111111111115Nucleoside diphosphate kinase
11111111112113Tetraspanin family
12111211122111220Ribosomal protein S10p/S20e
53544444554464768Arrestin (or S-antigen), N-terminal domain
11111111111111115Phosphoglucose isomerase
11111111111111115Carbohydrate phosphorylase
11111111111111115SecY translocase
11111111111111115Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222222222230Ribosomal protein L6
75888487845533790Polyprenyl synthetase
55444444455544465Hexokinase
3477754447951191298Dynamin family
11111111111111115Transcription factor TFIID (or TATA-binding protein, TBP)
11RTX calcium-binding nonapeptide repeat (4 copies)
84555565665555580Rieske [2Fe-2S] domain
1214Phytochrome region
44734325Proton-conducting membrane transporter
961010118101010899998136Biotin-requiring enzyme
11111111111111115Phosphofructokinase
22222222212222229Ribosomal protein S17
11111111111122117Hydroxymethylglutaryl-coenzyme A reductase
33333333333333345FGGY family of carbohydrate kinases, N-terminal domain
11111111111111115Sodium:dicarboxylate symporter family
138111212121111127910101012160Enoyl-CoA hydratase/isomerase
22222222222222230Ribosomal protein S9/S16
22222222222222230Transcription factor TFIIB repeat
65666766666566588Cytidine and deoxycytidylate deaminase zinc-binding region
12111111121111117Molybdopterin oxidoreductase
5455575767212108492Chromo (CHRromatin Organisation MOdifier) domain
32333333433333345Phosphatidylinositol-specific phospholipase C, Y domain
33333433444333450Phosphatidylinositol-specific phospholipase C, X domain
1099998779878101110131D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
21222222222222229Malic enzyme, N-terminal domain
212222222212222286-phosphogluconate dehydrogenase, C-terminal domain
95101112111110107988811140Multicopper oxidase
1291111111111101191011111110159WW domain
11111111111111115Ribosomal RNA adenine dimethylase
2122222222222126Yeast PIR protein repeat
103971161171271171141321221111031011171181051,700WD domain, G-beta repeat
76544656654444474Heavy-metal-associated domain
34444333344433352Adenylate kinase
23222223223222334Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222222221111226Ribosomal protein S8
11111111111111115Ribosomal protein S11
43444444444444459LIM domain
121131111113Matrixin
11211221222222225Regulator of chromosome condensation (RCC1) repeat
23222222222222231Ribosomal protein S13/S18
12115NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
11REV protein (anti-repression trans-activator protein)
22222222222322231chorismate binding enzyme
4444444443334445760s Acidic ribosomal protein
44544455544444363Prenyltransferase and squalene oxidase repeat
55566655555655478Protein kinase C terminal domain
11111111111111115Single-strand binding protein family
11111111111111115S-adenosylmethionine synthetase, N-terminal domain
767777777779887108Bromodomain
131416151514151517121212141412210Acyl-CoA dehydrogenase, C-terminal domain
151515141414151515171714141415223Ubiquitin carboxyl-terminal hydrolase
11111111111112Ribosomal protein L36
22223222222222231Ribonuclease T2 family
32334333333333345HSF-type DNA-binding