PFAM Domains • Crepidotus variabilis CBS 506.95 v1.0
Annotations/GenomesCorgl3Crevar1Galma1Gymch1Hebcy2Hypsu1TotalAnnotation Description
PFAMs
8,17910,1289,4978,8567,6758,51252,847
433848524550276ATPase family associated with various cellular activities (AAA)
515268614450326ABC transporter
44444424ATP synthase alpha/beta family, nucleotide-binding domain
213EGF-like domain
16171515181798Elongation factor Tu GTP binding domain
11111111121167Helix-loop-helix DNA-binding domain
1078157754Hsp20/alpha crystallin family
9111313121169Hsp70 protein
129887852KH domain
111115SH2 domain
322229262829166SH3 domain
13121110111168Actin
46174383137227Ankyrin repeat
811988852ADP-ribosylation factor family
231728271524134Eukaryotic aspartyl protease
33333318Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
22Cytochrome b/b6/petB
1121117Cytochrome c
89668542Double-stranded RNA binding motif
1711719191891EF hand
1111154Fe-4S binding domain
111115Fibronectin type III domain
1520141451179Glutathione S-transferase, C-terminal domain
1121218Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
2417Hemopexin
888991052Homeodomain
11Laminin EGF domain
22222212lactate/malate dehydrogenase, NAD binding domain
56545732Myosin head (motor domain)
17117517417389154936Cytochrome P450
1651601921872061521,062Protein kinase domain
151520211719107Pyridine nucleotide-disulphide oxidoreductase
253135282930178Ras family
89887949Response regulator receiver domain
1961095958RNase H
696069706562395RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
113216Reverse transcriptase (RNA-dependent DNA polymerase)
1111217Copper/zinc superoxide dismutase (SODC)
22322213Iron/manganese superoxide dismutases, alpha-hairpin domain
624161012876Subtilase family
263739382233195Sugar (and other) transporter
11101310101064Thioredoxin
56569637Tubulin/FtsZ family, GTPase domain
6755730von Willebrand factor type A domain
712360545875341Zinc finger, C2H2 type
591374715666339Zinc finger, C3HC4 type (RING finger)
321139142016132Zinc knuckle
34322216Protein-tyrosine phosphatase
5965809348115460short chain dehydrogenase
293335462537205Zinc-binding dehydrogenase
55445427Thiolase, N-terminal domain
96894541Beta-ketoacyl synthase, N-terminal domain
313334172Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
1112128Enolase, C-terminal TIM barrel domain
1113Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
108877747Glutamine amidotransferase class-I
10101011111365TCP-1/cpn60 chaperonin family
112ATP synthase A chain
43344422Glutamine synthetase, catalytic domain
1121117Triosephosphate isomerase
16181412141488E1-E2 ATPase
15121518162399Core histone H2A/H2B/H3/H4
1315Copper binding proteins, plastocyanin/azurin family
57878540Alpha amylase, catalytic domain
55664531Phorbol esters/diacylglycerol binding domain (C1 domain)
53325321Bacterial transferase hexapeptide (six repeats)
34533321tRNA synthetases class I (I, L, M and V)
10121514111375Cyclin, N-terminal domain
152834281640161Carboxylesterase family
44444525DNA polymerase family B
43333319ATP synthase subunit C
1643423822107Peroxidase
41012147855Beta-lactamase
44454425C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
272530303129172Calcineurin-like phosphoesterase
102522201014101Cellulase (glycosyl hydrolase family 5)
55756836tRNA synthetases class II (D, K and N)
403641403736230Mitochondrial carrier protein
12161613141384Aminotransferase class I and II
73876738Phosphoribosyl transferase domain
12121212121474Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
1111217Chaperonin 10 Kd subunit
241427161722120C2 domain
20724201618105PH domain
88546637bZIP transcription factor
211818161217102Aldehyde dehydrogenase family
615963646666379Fungal Zn(2)-Cys(6) binuclear cluster domain
222227242423142Cytochrome b5-like Heme/Steroid binding domain
21324214Oxidoreductase molybdopterin binding domain
87998849Oxidoreductase NAD-binding domain
233129322731173SNF2 family N-terminal domain
22322213Ribosomal protein S7p/S5e
242323222323138Ubiquitin-conjugating enzyme
85665636Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
22392321Hsp90 protein
22332214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
11114Chitin recognition protein
18425222Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
58121421Cupin
1111127Annexin
333334192-oxoacid dehydrogenases acyltransferase (catalytic domain)
42592325Catalase
1111116Disintegrin
2610116338UDP-glucoronosyl and UDP-glucosyl transferase
551055535Aminotransferase class-III
22322213Ribosomal protein S19
1111116DNA gyrase B
42453422Thiamine pyrophosphate enzyme, central domain
44453525Lyase
11222210Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1112229Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
32534219Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
98889951Kinesin motor domain
383338343231206DnaJ domain
14141414141484Proteasome subunit
79766439Major intrinsic protein
1111116ATP synthase
22533318Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
1212219Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
181920201618111Ubiquitin family
55655531Cofilin/tropomyosin-type actin-binding protein
111111614-3-3 protein
21322212Alkaline phosphatase
1311118Zinc carboxypeptidase
364847422537235Aldo/keto reductase family
1381313121574Myb-like DNA-binding domain
466104838Forkhead domain
2114Glycosyl hydrolases family 32 N-terminal domain
1211117Ribosomal protein L16p/L10e
22222212Ribosomal protein S14p/S29e
310493736FKBP-type peptidyl-prolyl cis-trans isomerase
1121117Glutathione peroxidase
222129
73665835Flavodoxin
1111116Calreticulin family
884931143Common central domain of tyrosinase
711797748Aminotransferase class-V
234162330Ribonucleotide reductase, small chain
705849595256344DEAD/DEAH box helicase
106928810191103581Helicase conserved C-terminal domain
1111116Fructose-bisphosphate aldolase class-I
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111217Ribosomal protein L5
86475535Pyridoxal-dependent decarboxylase conserved domain
34443321Citrate synthase, C-terminal domain
55556531GHMP kinases N terminal domain
65776738Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
78777743Pyridoxal-phosphate dependent enzyme
161418181817101NUDIX domain
54446427pfkB family carbohydrate kinase
391762744Glycosyl hydrolases family 28
22232213Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
11811119858Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
11147Lipoxygenase
44444424ATP synthase alpha/beta chain, C terminal domain
65434426Calponin homology (CH) domain
62795534Glutamine amidotransferases class-II
22222212Ribosomal protein S15
16253421Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
213121120Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
53642323SRF-type transcription factor (DNA-binding and dimerisation domain)
139121191165GATA zinc finger
21831251830133Amino acid permease
67986844Prolyl oligopeptidase family
1211117Ribosomal protein L30p/L7e
6991071051Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
45464528Aconitase family (aconitate hydratase)
26951730Glycosyl hydrolase family 10
36443222Glycosyl hydrolases family 17
22222212Ribosomal protein S5, N-terminal domain
12222211Nucleoside diphosphate kinase
13442216Tetraspanin family
3115Galactoside-binding lectin
22222212Ribosomal protein S10p/S20e
35936632Arrestin (or S-antigen), N-terminal domain
1221129Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1111116SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
74995438Polyprenyl synthetase
22434318Hexokinase
78777945Dynamin family
2112219Transcription factor TFIID (or TATA-binding protein, TBP)
53544425Rieske [2Fe-2S] domain
22Phytochrome region
336Proton-conducting membrane transporter
98101091056Biotin-requiring enzyme
1111116Phosphofructokinase
22222212Ribosomal protein S17
1111116Hydroxymethylglutaryl-coenzyme A reductase
33333318FGGY family of carbohydrate kinases, N-terminal domain
881098952Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
22333417Transcription factor TFIIB repeat
66677840Cytidine and deoxycytidylate deaminase zinc-binding region
1111116Molybdopterin oxidoreductase
157121171567Chromo (CHRromatin Organisation MOdifier) domain
73343424Phosphatidylinositol-specific phospholipase C, Y domain
75343426Phosphatidylinositol-specific phospholipase C, X domain
65676636D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
33344320Malic enzyme, N-terminal domain
11111166-phosphogluconate dehydrogenase, C-terminal domain
879631346Multicopper oxidase
97910101156WW domain
22322213Ribosomal RNA adenine dimethylase
181129166207142141966WD domain, G-beta repeat
43433421Heavy-metal-associated domain
33333318Adenylate kinase
23121110Phosphoglucomutase/phosphomannomutase, C-terminal domain
1211117Ribosomal protein S8
22222212Ribosomal protein S11
67777741LIM domain
2136Matrixin
33223215Regulator of chromosome condensation (RCC1) repeat
22232213Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22222212chorismate binding enzyme
4253321960s Acidic ribosomal protein
44446426Prenyltransferase and squalene oxidase repeat
64765735Protein kinase C terminal domain
1111116Single-strand binding protein family
1111127S-adenosylmethionine synthetase, N-terminal domain
10111011101062Bromodomain
8109991055Acyl-CoA dehydrogenase, C-terminal domain
14151918141595Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
42233216Ribonuclease T2 family
941646443HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
9171413101780Serine carboxypeptidase
88989850Phosphatidylinositol 3- and 4-kinase
22223213Transketolase, thiamine diphosphate binding domain
382215Glycosyl hydrolases family 11
11114WHEP-TRS domain
22222212Inositol monophosphatase family
54445426Glutaredoxin
525441232Isocitrate lyase family
1111116Serine hydroxymethyltransferase
22222212Iron-containing alcohol dehydrogenase
22222212Ribosomal protein L10
54855532KOW motif
1111116Ribosomal protein L34
11Ribosomal protein L33
33232215RF-1 domain
21321413Sodium:solute symporter family
111115Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
2111117Glucose-6-phosphate dehydrogenase, NAD binding domain
139141010965Protein phosphatase 2C
13233315Nucleotidyl transferase
376117640Carbonic anhydrase
1111116Phosphoribulokinase / Uridine kinase family
10101414111170Fatty acid desaturase
66666636MutS domain V
1111116Delta-aminolevulinic acid dehydratase
33455424Arginase family
96766640MCM P-loop domain
1212118Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 3
91113881362FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
312634342532182AMP-binding enzyme
141924191721114G-protein alpha subunit
171320321323118HMG (high mobility group) box
112NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1113Cytochrome c oxidase subunit III
75544530His Kinase A (phospho-acceptor) domain
44443221Armadillo/beta-catenin-like repeat
301538343836191Tetratricopeptide repeat
33433319Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
1031010111054BRCA1 C Terminus (BRCT) domain
84776840Glycosyl transferases group 1
33746427Glycosyl transferase family 2
31314315SAM domain (Sterile alpha motif)
43424421linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
2226Pectate lyase
22ribonuclease
1111116Urease, gamma subunit
33353320CoA-ligase
891078547Phosphopantetheine attachment site
22222212Formyl transferase
9109991056Metallopeptidase family M24
1441617131478Leucine Rich Repeat
441244493147227alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
65555531PB1 domain
22222212Staphylococcal nuclease homologue
11121111101166Rab-GTPase-TBC domain
1111116Tudor domain
21221210WH1 domain
34543726Zinc finger, ZZ type
1111116HRDC domain
1071011101159CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
54355527S1 RNA binding domain
111115HIUase/Transthyretin family
54544729AhpC/TSA family
44544425tRNA synthetases class I (W and Y)
1211117UvrD/REP helicase N-terminal domain
49544531Rhodanese-like domain
22212312Universal stress protein family
292040413146207Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
32222213AIR synthase related protein, N-terminal domain
95666638tRNA synthetase class II core domain (G, H, P, S and T)
22Phage integrase family
22222212Tetrapyrrole (Corrin/Porphyrin) Methylases
1112117Glycosyl transferase family, a/b domain
11332313Class II Aldolase and Adducin N-terminal domain
44444424Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
68678641Fes/CIP4, and EFC/F-BAR homology domain
421134327IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
52443321Phospholipase D Active site motif
1311129Regulator of G protein signaling domain
74444427GTPase-activator protein for Ras-like GTPase
781079748RasGEF domain
771078746RasGEF N-terminal motif
14121414151382RhoGAP domain
14151714131386RhoGEF domain
44444424SPRY domain
34323419RNA polymerase Rpb1, domain 2
1121117Guanylate kinase
44444323Gelsolin repeat
1381099958UBA/TS-N domain
251621182518123PHD-finger
2211118GGL domain
761866649HECT-domain (ubiquitin-transferase)
1112117Helix-hairpin-helix motif
12211613MSP (Major sperm protein) domain
113669843Ribonuclease III domain
25672224Region in Clathrin and VPS
34544323RanBP1 domain
21222211PPIC-type PPIASE domain
42333419Zn-finger in Ran binding protein and others
231227232521131Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1111116B-box zinc finger
107657944Poly(ADP-ribose) polymerase catalytic domain
22221211Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
130432942552061211,049F-box domain
2111117Elongation factor 1 gamma, conserved domain
217645649Calpain family cysteine protease
22223213Copper fist DNA binding domain
77786742CRAL/TRIO domain
193650132019157BTB/POZ domain
10111616111074Ricin-type beta-trefoil lectin domain
2111117Inhibitor of Apoptosis domain
33333318Voltage gated chloride channel
251642271639165Caspase domain
5111875955GDSL-like Lipase/Acylhydrolase
2121219Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
262738371924171ABC transporter transmembrane region
121619Integrase core domain
33333318FAD binding domain
42322215Condensation domain
1221118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
162111223HAMP domain
22222313ribosomal L5P family C-terminus
55555530Insulinase (Peptidase family M16)
44444525Dehydrogenase E1 component
1111116Lumazine binding domain
88779847Elongation factor G C-terminus
44444424HMGL-like
44444424DnaJ central domain
42334521Starch binding domain
43233217Ribosomal protein L1p/L10e family
77868642Cation transporting ATPase, C-terminus
1089810853Cation transporter/ATPase, N-terminus
1111116dUTPase
44654427Aconitase C-terminal domain
43333319Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
847105539Acyl transferase domain
1111116Urease beta subunit
22222212Dihydrodipicolinate synthetase family
311332332932170haloacid dehalogenase-like hydrolase
12221210Glycosyl hydrolases family 2
9171614111178Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
1111116Adenylosuccinate synthetase
1111116Asparaginase, N-terminal
34434220Peptidase S24-like
1111116Inorganic pyrophosphatase
520556647Glycosyl hydrolases family 16
42334521Glycosyl hydrolases family 15
69111551056NADH:flavin oxidoreductase / NADH oxidase family
11111163-hydroxyacyl-CoA dehydrogenase, C-terminal domain
11222210Glycosyl hydrolase family 20, catalytic domain
56564531HhH-GPD superfamily base excision DNA repair protein
3111129AIR carboxylase
322740451832194GMC oxidoreductase
32462219Asparagine synthase
2275229228140Fungal cellulose binding domain
88777744Septin
1111116EF-1 guanine nucleotide exchange domain
2111117Homoserine dehydrogenase
16322216Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
34343320tRNA synthetases class I (E and Q), catalytic domain
1121117tRNA synthetases class I (R)
689551043XPG N-terminal domain
94111081153Metallo-beta-lactamase superfamily
111115F5/8 type C domain
64444729Choline/Carnitine o-acyltransferase
1111116Putative esterase
11Furin-like cysteine rich region
1111116Glycosyl hydrolase family 9
1111116Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33343420RNB domain
24522520Dioxygenase
56554429CNH domain
22222212Diacylglycerol kinase catalytic domain
11141515131179Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
64555328P21-Rho-binding domain
15161515161592PX domain
44545325Ras association (RalGDS/AF-6) domain
44444525UBX domain
65555531VHS domain
1111116Phosphoinositide 3-kinase C2
22222212DAHP synthetase I family
35323319Carbon-nitrogen hydrolase
112N-acetyltransferase
1111116Prephenate dehydratase
44644426Syntaxin
54555630Pumilio-family RNA binding repeat
67677639Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
1111116ER lumen protein retaining receptor
22222212Glycoprotease family
1111116Histidinol dehydrogenase
33433319impB/mucB/samB family
111115
1111116Ribosomal L15
1311118Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1111116Ribosomal S17
1111217Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
4931421Glycosyl hydrolase family 7
22222212RNA pseudouridylate synthase
77777843Histone deacetylase domain
25522319POT family
22222212PWWP domain
202333371826157SET domain
67586537Isochorismatase family
23222415Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
9141213101169XPG I-region
1124Acetokinase family
1111116DNA photolyase
11114Cation-independent mannose-6-phosphate receptor repeat
2111117Cytosol aminopeptidase family, catalytic domain
111126Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
33323317Acyl CoA binding protein
76587639Cullin family
111115Elongation factor TS
33732422FAD binding domain
32883933O-methyltransferase domain
655710538EamA-like transporter family
2222210
108878950ThiF family
1111116Ribosomal family S4e
41562321Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
34544323Ammonium Transporter Family
33443320Sulfate permease family
12321110MATH domain
23222213Dehydratase family
22424216Transaldolase/Fructose-6-phosphate aldolase
33333318Mechanosensitive ion channel
1211117GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
44544425Adaptor complexes medium subunit family
87898747Exonuclease
1111116Dipeptidyl peptidase IV (DPP IV) N-terminal region
1124NB-ARC domain
6911105950Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
11Sodium:sulfate symporter transmembrane region
2111117DNA-dependent RNA polymerase
1111116Glycosyl transferase family 4
2111117HCO3- transporter family
22323315Nucleosome assembly protein (NAP)
54454426Synaptobrevin
1111116GMP synthase C terminal domain
121329Phage lysozyme
718LAGLIDADG endonuclease
33433420Adenosine/AMP deaminase
43545425Oxidoreductase FAD-binding domain
33231214Thioesterase domain
22222212Histidine biosynthesis protein
33343319Glycosyltransferase family 20
1111116UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
112PAS fold
22222212Probable molybdopterin binding domain
44444424Sec1 family
22222212GDP dissociation inhibitor
1066105946Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
54554427Initiation factor 2 subunit family
112PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
1111127Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
1111116GTP1/OBG
22222212Gamma-glutamyltranspeptidase
1111116GrpE
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