PFAM Domains • Aspergillus niger NRRL3
Annotations/GenomesAspac1Aspbr1Aspca3Aspcl1Aspfl1Aspfo1Aspfu1Aspgl1Aspni5Aspni_DSM_1Aspni_NRRL3_1Aspnid1Aspor1Aspsy1Aspte1Asptu1Aspve1Aspwe1Aspzo1TotalAnnotation Description
PFAMs
9,47810,4079,7327,97710,22610,1598,4528,5647,8769,82410,4629,0749,73611,1439,07210,01711,37010,0498,161181,779
44524338455040413846474243414349415045838ATPase family associated with various cellular activities (AAA)
716872557565525262626349825258616562531,179ABC transporter
444445444445445644481ATP synthase alpha/beta family, nucleotide-binding domain
1111111119EGF-like domain
14141314161414161414141316141414141414270Elongation factor Tu GTP binding domain
9999129999109131014109151010194Helix-loop-helix DNA-binding domain
444234323445332445366Hsp20/alpha crystallin family
7787787778787777777137Hsp70 protein
8787887778887878778143KH domain
11111111111111111118SH2 domain
24232024232323212423232321242223242223433SH3 domain
1010111011101011711101011101010101510197Actin
82784446104726311276999659105115907382111451,552Ankyrin repeat
315113134112430PAN domain
7777977777778787877138ADP-ribosylation factor family
141315913117611111210131281112119208Eukaryotic aspartyl protease
455444445554444444481Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
11111111111111111118Cytochrome c
12213221322231121132Double-stranded RNA binding motif
16201717201920172119191819222019222021366EF hand
1112212122212121111274Fe-4S binding domain
322223223333121322243Fibronectin type III domain
221222212222222221235Globin
17211712182014121218201218191622171813316Glutathione S-transferase, C-terminal domain
222432312122322221240Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11114Hemopexin
999777666887710781096146Homeodomain
353333344444233435265lactate/malate dehydrogenase, NAD binding domain
111122211113Low-density lipoprotein receptor repeat class B
11Lipocalin / cytosolic fatty-acid binding protein family
543554544555545444585Myosin head (motor domain)
119146131901481497283132143147114149148115159168132642,409Cytochrome P450
1001441451181161441101101221281351041151141211411121441312,354Protein kinase domain
19201813171716171516161919222016222013335Pyridine nucleotide-disulphide oxidoreductase
22232423242322222223232324232423232323437Ras family
18141418191416181314141915231514171715307Response regulator receiver domain
23424718339101051241391RNase H
636255645665636363636465616861646666631,195RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1212283207165Reverse transcriptase (RNA-dependent DNA polymerase)
112Serpin (serine protease inhibitor)
352123223332222321245Copper/zinc superoxide dismutase (SODC)
222222222222122222237Iron/manganese superoxide dismutases, alpha-hairpin domain
758476544553446668299Subtilase family
871019260117100836815296100106115171115961641101002,033Sugar (and other) transporter
91099161212911111191511111110159210Thioredoxin
311243131112242244243Trypsin
544564554447655445490Tubulin/FtsZ family, GTPase domain
213211321112121123131von Willebrand factor type A domain
68797454547756686566816240102657010776561,320Zinc finger, C2H2 type
44414341294540403138443933503342464443766Zinc finger, C3HC4 type (RING finger)
7569878167910762244108Zinc knuckle
222232223332322322244Protein-tyrosine phosphatase
13817116497163144110130141148156141150190129143234146902,785short chain dehydrogenase
95125108611031195494118115117739911280119125114561,887Zinc-binding dehydrogenase
6696666776676876975126Thiolase, N-terminal domain
33503125404919195051503736233356342918683Beta-ketoacyl synthase, N-terminal domain
5554463555654756844962Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
111111121111111111221Enolase, C-terminal TIM barrel domain
111126Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
109981110899998999109109174Glutamine amidotransferase class-I
101010101010101091010109101010101010188TCP-1/cpn60 chaperonin family
1113ATP synthase A chain
555374574443855455492Glutamine synthetase, catalytic domain
222222222222221222237Triosephosphate isomerase
14171816192018141716181820301919231915350E1-E2 ATPase
7797777777778787787138Core histone H2A/H2B/H3/H4
1715171615161561517151216201315171111279Alpha amylase, catalytic domain
222222321222222222238Phorbol esters/diacylglycerol binding domain (C1 domain)
1210997111011101012109108111099187Bacterial transferase hexapeptide (six repeats)
333433347333334343365tRNA synthetases class I (I, L, M and V)
77668777107777657687132Cyclin, N-terminal domain
41414112364616204246462442342749453348689Carboxylesterase family
444444444444444444476DNA polymerase family B
566456444556544544490ATP synthase subunit C
334333323333333334358Peroxidase
91298196641011118161313917137201Beta-lactamase
222222222222122223238C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
11Nitrogenase component 1 type Oxidoreductase
27283027293028282930312829302629293027545Calcineurin-like phosphoesterase
11107911912478812911151013118185Cellulase (glycosyl hydrolase family 5)
7777788777777778777136tRNA synthetases class II (D, K and N)
39394337434138393938393843434239464436766Mitochondrial carrier protein
11111117recA bacterial DNA recombination protein
27282619353324222228302235333030342922529Aminotransferase class I and II
1089109107108810810129811128177Phosphoribosyl transferase domain
10101111111011101210101112111010111110202Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111111111111119Phosphoglycerate kinase
221222111222122212131Ribosomal protein S4/S9 N-terminal domain
222222222222222222238Ribosomal protein S12/S23
221121212122111224Bacterial regulatory helix-turn-helix proteins, AraC family
11121121111111111120Chaperonin 10 Kd subunit
1210111211101110109101110111310111110203C2 domain
17161818161717171515162014201717181618322PH domain
1012913101210991010106149913910194bZIP transcription factor
25343321313123332928302830543031583425608Aldehyde dehydrogenase family
3024103451802203392102682422964523051885241833285683512755,986Fungal Zn(2)-Cys(6) binuclear cluster domain
28292726342924292928282830322629303324543Cytochrome b5-like Heme/Steroid binding domain
223353345553453346371Oxidoreductase molybdopterin binding domain
17191915221916152520241722201720231813361Oxidoreductase NAD-binding domain
27272625272727232528302428262928272626506SNF2 family N-terminal domain
222222222222222222238Ribosomal protein S7p/S5e
23222221212221202121222121212022212020402Ubiquitin-conjugating enzyme
88889898978891088988158Isocitrate/isopropylmalate dehydrogenase
222222222222122222237Ribosomal Proteins L2, RNA binding domain
111111111111111111119Hsp90 protein
222222221222222222237Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111111111111119Dihydrofolate reductase
54434344367154554374Chitin recognition protein
22232222222221222236Cysteine-rich secretory protein family
111111111111111111119Ribosomal protein S3, C-terminal domain
544334143343221444159Cupin
232323312233243342249Annexin
31111111121115Eukaryotic-type carbonic anhydrase
11211113112Chalcone and stilbene synthases, N-terminal domain
66Bacterial regulatory proteins, luxR family
3453434443434334443692-oxoacid dehydrogenases acyltransferase (catalytic domain)
71013561041299946749684142Catalase
212112221222221221131Disintegrin
2231213432112222134UDP-glucoronosyl and UDP-glucosyl transferase
678514978878813118817116169Aminotransferase class-III
222222122221122222235Ribosomal protein S19
111111111111111111119DNA gyrase B
12813713971288961311121010127187Thiamine pyrophosphate enzyme, central domain
454344345554474455382Lyase
222222222222222222238Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111217Sodium:neurotransmitter symporter family
11114Ferritin-like domain
11111111111111111118Adenylate and Guanylate cyclase catalytic domain
111111111111111111119ATP synthase delta (OSCP) subunit
222222121221222222134Orotidine 5'-phosphate decarboxylase / HUMPS family
112111112111111111121Indole-3-glycerol phosphate synthase
445133123332422322251Aromatic amino acid lyase
111111111111111111119Pyruvate kinase, barrel domain
11101111101111101111111111111111111110205Kinesin motor domain
27292827272828252729272723272728282728517DnaJ domain
14141714151414141314141514151414151414272Proteasome subunit
8775873457759657775119Major intrinsic protein
111111111111111111119ATP synthase
333432513333333353258Glycosyl hydrolase family 1
1111111111111111111193'5'-cyclic nucleotide phosphodiesterase
112121111111111112122Profilin
111111111111111111119Ribosomal protein L22p/L17e
222222222222222222238Ribosomal protein L14p/L23e
1198121091111781011899981110181Ubiquitin family
645365344554453365484Cofilin/tropomyosin-type actin-binding protein
22222222222222222223814-3-3 protein
222452442224554253261Alkaline phosphatase
111121111112222121125Zinc carboxypeptidase
35404325403930283738394044484040573932734Aldo/keto reductase family
15151314151414161412131715171612151517279Myb-like DNA-binding domain
343445444444444444475Forkhead domain
27314344455333636571Glycosyl hydrolases family 32 N-terminal domain
111111111111111111119Ribosomal protein L16p/L10e
222222221222121222235Ribosomal protein S14p/S29e
443454434445453455478FKBP-type peptidyl-prolyl cis-trans isomerase
211121111111121111122Glutathione peroxidase
111211221111211112225
98871187611910710778987157Flavodoxin
112Protamine P1
112111111111111111120Calreticulin family
6612410632578988461095128Common central domain of tyrosinase
1088710997381069999975152Aminotransferase class-V
111111111111111111119Ribonucleotide reductase, small chain
41423639414541404537423941413942394038768DEAD/DEAH box helicase
777368757577817172758070797577747578721,424Helicase conserved C-terminal domain
111121211111212111123EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222222222122222237Ribosomal protein L23
21124132111512111131Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111111111111111119Ribosomal protein L5
610771096689961261298118159Pyridoxal-dependent decarboxylase conserved domain
356345354443434535477Citrate synthase, C-terminal domain
555555565555555556597GHMP kinases N terminal domain
8776876777788987896140Biotin carboxylase, N-terminal domain
245233123331313223248Tryptophan synthase alpha chain
14171514181413161414141419161313181512283Pyridoxal-phosphate dependent enzyme
18171414201616161614161420151616171715307NUDIX domain
5596756545566785695114pfkB family carbohydrate kinase
1919193201911222192111181081911127270Glycosyl hydrolases family 28
1111111112121121120Luciferase-like monooxygenase
223222222222222222239Ribosomal protein L3
222222221222222222237Ribosomal protein L11, RNA binding domain
131314121410131481113914111010132012234Histidine phosphatase superfamily (branch 1)
11111111111111111118Thymidylate synthase
1214Lipoxygenase
444445444445444544479ATP synthase alpha/beta chain, C terminal domain
655555455455454455490Calponin homology (CH) domain
5684554556657655764104Glutamine amidotransferases class-II
222222222222222222238Ribosomal protein S15
11114'Cold-shock' DNA-binding domain
111111111111111111119Fructose-1-6-bisphosphatase, N-terminal domain
111111111111111111119Ribonucleotide reductase, all-alpha domain
222222222222222222238Ribosomal protein S2
231226324242232422250SRF-type transcription factor (DNA-binding and dimerisation domain)
778781076677788678107141GATA zinc finger
616971376665483462616452718649678757561,163Amino acid permease
656455441676454653490Prolyl oligopeptidase family
22222222222122222235Ribosomal protein L30p/L7e
131415121514108111213914111114111215234Histidine phosphatase superfamily (branch 2)
111111111111111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6775675687767757776123Aconitase family (aconitate hydratase)
23242422123424244148Glycosyl hydrolase family 10
454335422554423523469Glycosyl hydrolases family 17
222222122222222222237Ribosomal protein S5, N-terminal domain
111111111111111111119Nucleoside diphosphate kinase
1124Galactoside-binding lectin
222122222122222222135Ribosomal protein S10p/S20e
71073910363912668610784134Arrestin (or S-antigen), N-terminal domain
111111111111111111119Phosphoglucose isomerase
11211111111111111119Carbohydrate phosphorylase
111111111111111111119SecY translocase
11111