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PFAM Domains • Armillaria nabsnona CMW6904 v1.0
Annotations/GenomesArmcep1Armga1Armme1_1Armnab1Armost1Armosto1TotalAnnotation Description
PFAMs
15,08210,4008,64812,40210,01513,84770,394
111147 transmembrane receptor (rhodopsin family)
455342454846279ATPase family associated with various cellular activities (AAA)
716565626670399ABC transporter
44444424ATP synthase alpha/beta family, nucleotide-binding domain
224EGF-like domain
15151515151590Elongation factor Tu GTP binding domain
14131313141582Helix-loop-helix DNA-binding domain
137911101161Hsp20/alpha crystallin family
129810101059Hsp70 protein
88788847KH domain
1113SH2 domain
193129183121149SH3 domain
13111311111170Actin
197033134911195Ankyrin repeat
88688846ADP-ribosylation factor family
303229293028178Eukaryotic aspartyl protease
45444425Cyclic nucleotide-binding domain
1111116Cytochrome c
11146117857Double-stranded RNA binding motif
32020222471EF hand
1222184Fe-4S binding domain
1113Fibronectin type III domain
1010899753Glutathione S-transferase, C-terminal domain
2111117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1113910111165Homeodomain
23323215lactate/malate dehydrogenase, NAD binding domain
54546529Myosin head (motor domain)
3253242462892742711,729Cytochrome P450
2742211542522262591,386Protein kinase domain
12171713161489Pyridine nucleotide-disulphide oxidoreductase
262522272527152Ras family
11121111121370Response regulator receiver domain
19236202132121RNase H
687771657066417RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
485271336849Reverse transcriptase (RNA-dependent DNA polymerase)
54444425Copper/zinc superoxide dismutase (SODC)
22223213Iron/manganese superoxide dismutases, alpha-hairpin domain
1910617122286Subtilase family
594743524351295Sugar (and other) transporter
19171215161594Thioredoxin
55555429Tubulin/FtsZ family, GTPase domain
53614von Willebrand factor type A domain
4711256559543408Zinc finger, C2H2 type
159946109813281Zinc finger, C3HC4 type (RING finger)
269361951280177769Zinc knuckle
32232315Protein-tyrosine phosphatase
152149122148143137851short chain dehydrogenase
394241424340247Zinc-binding dehydrogenase
54454527Thiolase, N-terminal domain
61069101051Beta-ketoacyl synthase, N-terminal domain
132131112Fe-2S iron-sulfur cluster binding domain
1111116Enolase, C-terminal TIM barrel domain
98887848Glutamine amidotransferase class-I
10101110101061TCP-1/cpn60 chaperonin family
55554529Glutamine synthetase, catalytic domain
1111116Triosephosphate isomerase
18131217131891E1-E2 ATPase
162116221919113Core histone H2A/H2B/H3/H4
14416117Copper binding proteins, plastocyanin/azurin family
12121213121374Alpha amylase, catalytic domain
56367532Phorbol esters/diacylglycerol binding domain (C1 domain)
66364530Bacterial transferase hexapeptide (six repeats)
75567535tRNA synthetases class I (I, L, M and V)
91069101155Cyclin, N-terminal domain
373733364236221Carboxylesterase family
54444425DNA polymerase family B
33333318ATP synthase subunit C
12111012121269Peroxidase
43133317Beta-lactamase
85557636C-5 cytosine-specific DNA methylase
273025273024163Calcineurin-like phosphoesterase
19111119121890Cellulase (glycosyl hydrolase family 5)
56555531tRNA synthetases class II (D, K and N)
424432414143243Mitochondrial carrier protein
182014182020110Aminotransferase class I and II
47647331Phosphoribosyl transferase domain
14151214151484Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
12123211Ribosomal protein S4/S9 N-terminal domain
22223213Ribosomal protein S12/S23
22222212Chaperonin 10 Kd subunit
16171414171694C2 domain
12221712201194PH domain
1287127955bZIP transcription factor
272820292326153Aldehyde dehydrogenase family
671244811612279556Fungal Zn(2)-Cys(6) binuclear cluster domain
232523242423142Cytochrome b5-like Heme/Steroid binding domain
23222213Oxidoreductase molybdopterin binding domain
101081010957Oxidoreductase NAD-binding domain
282723252626155SNF2 family N-terminal domain
22222212Ribosomal protein S7p/S5e
222421232324137Ubiquitin-conjugating enzyme
55555530Isocitrate/isopropylmalate dehydrogenase
32222213Ribosomal Proteins L2, RNA binding domain
22222212Hsp90 protein
23233316Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111115Dihydrofolate reductase
56676737Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
66655230Cupin
1111127Annexin
333333182-oxoacid dehydrogenases acyltransferase (catalytic domain)
445491541Catalase
111115Disintegrin
41241416UDP-glucoronosyl and UDP-glucosyl transferase
76656636Aminotransferase class-III
62222216Ribosomal protein S19
1111116DNA gyrase B
33333318Thiamine pyrophosphate enzyme, central domain
44544425Lyase
22422214Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111116Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
33242216Indole-3-glycerol phosphate synthase
33333419Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
12111210101065Kinesin motor domain
293129293330181DnaJ domain
14141414141484Proteasome subunit
55655531Major intrinsic protein
1111116ATP synthase
19141014101077Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
22122211Ribosomal protein L22p/L17e
23122212Ribosomal protein L14p/L23e
212515232422130Ubiquitin family
55655531Cofilin/tropomyosin-type actin-binding protein
2222221214-3-3 protein
13413113Alkaline phosphatase
1111116Zinc carboxypeptidase
726150675757364Aldo/keto reductase family
71310913860Myb-like DNA-binding domain
10961091054Forkhead domain
41121211Ribosomal protein L16p/L10e
2222210Ribosomal protein S14p/S29e
45555529FKBP-type peptidyl-prolyl cis-trans isomerase
1211117Glutathione peroxidase
1113
698610746Flavodoxin
1111116Calreticulin family
15121114131479Common central domain of tyrosinase
997109852Aminotransferase class-V
81521071456Ribonucleotide reductase, small chain
775546635172364DEAD/DEAH box helicase
1009486889492554Helicase conserved C-terminal domain
2112118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111116Ribosomal protein L5
65555632Pyridoxal-dependent decarboxylase conserved domain
43343421Citrate synthase, C-terminal domain
55455529GHMP kinases N terminal domain
66766536Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
88788847Pyridoxal-phosphate dependent enzyme
13151013151278NUDIX domain
55455529pfkB family carbohydrate kinase
181821161615104Glycosyl hydrolases family 28
22222212Ribosomal protein L3
22212211Ribosomal protein L11, RNA binding domain
1312512121367Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
44444424ATP synthase alpha/beta chain, C terminal domain
45344424Calponin homology (CH) domain
26525222Glutamine amidotransferases class-II
22322213Ribosomal protein S15
45554427Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1111217Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
12222211SRF-type transcription factor (DNA-binding and dimerisation domain)
101081011958GATA zinc finger
143221143216129Amino acid permease
1315Bacterial regulatory proteins, crp family
66555633Prolyl oligopeptidase family
2112118Ribosomal protein L30p/L7e
89999852Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
55555631Aconitase family (aconitate hydratase)
66656635Glycosyl hydrolase family 10
22122211Glycosyl hydrolases family 17
22222212Ribosomal protein S5, N-terminal domain
22222212Nucleoside diphosphate kinase
22122211Tetraspanin family
2112129Ribosomal protein S10p/S20e
41152417Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
1121117Carbohydrate phosphorylase
1111116SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
291812281116114Polyprenyl synthetase
22222212Hexokinase
1612613101269Dynamin family
1111217Transcription factor TFIID (or TATA-binding protein, TBP)
13233214Rieske [2Fe-2S] domain
1113Phytochrome region
89899952Biotin-requiring enzyme
1111116Phosphofructokinase
22122211Ribosomal protein S17
2111117Hydroxymethylglutaryl-coenzyme A reductase
34434321FGGY family of carbohydrate kinases, N-terminal domain
9101099956Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
22223213Transcription factor TFIIB repeat
68399742Cytidine and deoxycytidylate deaminase zinc-binding region
1111116Molybdopterin oxidoreductase
341116588235668Chromo (CHRromatin Organisation MOdifier) domain
33333318Phosphatidylinositol-specific phospholipase C, Y domain
53353524Phosphatidylinositol-specific phospholipase C, X domain
66566635D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
33333318Malic enzyme, N-terminal domain
11111166-phosphogluconate dehydrogenase, C-terminal domain
262626252525153Multicopper oxidase
71310914760WW domain
22122211Ribosomal RNA adenine dimethylase
139130102127120121739WD domain, G-beta repeat
44344423Heavy-metal-associated domain
33333318Adenylate kinase
2112129Phosphoglucomutase/phosphomannomutase, C-terminal domain
2112129Ribosomal protein S8
22222212Ribosomal protein S11
56255528LIM domain
54453526Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
22222212chorismate binding enzyme
3333331860s Acidic ribosomal protein
44344423Prenyltransferase and squalene oxidase repeat
46646430Protein kinase C terminal domain
1111116Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
10101110101061Bromodomain
77777742Acyl-CoA dehydrogenase, C-terminal domain
18181617151599Ubiquitin carboxyl-terminal hydrolase
11Ribosomal protein L36
22222212Ribonuclease T2 family
55555530HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
181618161518101Serine carboxypeptidase
112Apoptosis regulator proteins, Bcl-2 family
88888848Phosphatidylinositol 3- and 4-kinase
44544425Transketolase, thiamine diphosphate binding domain
1121117Glycosyl hydrolases family 11
1111116WHEP-TRS domain
66465734Inositol monophosphatase family
55555530Glutaredoxin
23323215Isocitrate lyase family
22322213Serine hydroxymethyltransferase
67466635Iron-containing alcohol dehydrogenase
22122211Ribosomal protein L10
45535325KOW motif
1113Ribosomal protein L34
1113Ribosomal protein L33
22132212RF-1 domain
33144419Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
129812111264Protein phosphatase 2C
33233317Nucleotidyl transferase
76767740Carbonic anhydrase
2111117Phosphoribulokinase / Uridine kinase family
181815192017107Fatty acid desaturase
86666739MutS domain V
1111116Delta-aminolevulinic acid dehydratase
55555530Arginase family
66666636MCM P-loop domain
2112129Squalene/phytoene synthase
1512913121273FHA domain
847156736974427AMP-binding enzyme
202219202120122G-protein alpha subunit
293026262626163HMG (high mobility group) box
78688845His Kinase A (phospho-acceptor) domain
34334320Armadillo/beta-catenin-like repeat
214132203219165Tetratricopeptide repeat
33334824Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
11Binding-protein-dependent transport system inner membrane component
71181011956BRCA1 C Terminus (BRCT) domain
798810749Glycosyl transferases group 1
45444324Glycosyl transferase family 2
1211229SAM domain (Sterile alpha motif)
44444424linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
65565633Pectate lyase
54164525ribonuclease
1111116Urease, gamma subunit
33333318CoA-ligase
231813221522113Phosphopantetheine attachment site
33233317Formyl transferase
1819915141792Metallopeptidase family M24
3148214243Leucine Rich Repeat
317459207724285alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
55555530PB1 domain
22222212Staphylococcal nuclease homologue
1210712101364Rab-GTPase-TBC domain
1111116Tudor domain
11226WH1 domain
66365531Zinc finger, ZZ type
1111217HRDC domain
6137710649CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
111115Clp protease
34243319S1 RNA binding domain
111115HIUase/Transthyretin family
88868846AhpC/TSA family
44544425tRNA synthetases class I (W and Y)
71141721UvrD/REP helicase N-terminal domain
95393938Rhodanese-like domain
22222212Universal stress protein family
183122203119141Acetyltransferase (GNAT) family
111115SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
66756535tRNA synthetase class II core domain (G, H, P, S and T)
1113Phage integrase family
65224423Tetrapyrrole (Corrin/Porphyrin) Methylases
1111116Glycosyl transferase family, a/b domain
22222212Class II Aldolase and Adducin N-terminal domain
44344423Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
76676638Fes/CIP4, and EFC/F-BAR homology domain
23424217IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
13314214Phospholipase D Active site motif
41141415Regulator of G protein signaling domain
44344423GTPase-activator protein for Ras-like GTPase
87787845RasGEF domain
78778744RasGEF N-terminal motif
14151312151382RhoGAP domain
181714181720104RhoGEF domain
44444424SPRY domain
33333318RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
44444424Gelsolin repeat
48958539UBA/TS-N domain
12181216201391PHD-finger
112116GGL domain
55555530HECT-domain (ubiquitin-transferase)
13314315Helix-hairpin-helix motif
22BRCA2 repeat
1111116MSP (Major sperm protein) domain
59656637Ribonuclease III domain
42242418Region in Clathrin and VPS
43333420RanBP1 domain
1221219PPIC-type PPIASE domain
23243317Zn-finger in Ran binding protein and others
164124163414145Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1111116B-box zinc finger
66375330Poly(ADP-ribose) polymerase catalytic domain
22122211Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
44234974024545705F-box domain
1111116Elongation factor 1 gamma, conserved domain
14122111Calpain family cysteine protease
122218Copper fist DNA binding domain
77577740CRAL/TRIO domain
472319482847212BTB/POZ domain
14414115Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
34233318Voltage gated chloride channel
18517795172118140887Caspase domain
1112811111063GDSL-like Lipase/Acylhydrolase
22222212Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
252421222431147ABC transporter transmembrane region
48765343895Integrase core domain
66466634FAD binding domain
21123211Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
33333419HAMP domain
22222212ribosomal L5P family C-terminus
55555530Insulinase (Peptidase family M16)
44444424Dehydrogenase E1 component
1111116Lumazine binding domain
77777742Elongation factor G C-terminus
55555530HMGL-like
44244422DnaJ central domain
55355427Starch binding domain
32432317Ribosomal protein L1p/L10e family
88676742Cation transporting ATPase, C-terminus
86677741Cation transporter/ATPase, N-terminus
1111116dUTPase
76565635Aconitase C-terminal domain
33233317Amino acid kinase family
1112117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
713898853Acyl transferase domain
1111116Urease beta subunit
43333319Dihydrodipicolinate synthetase family
143833133614148haloacid dehalogenase-like hydrolase
22222212Glycosyl hydrolases family 2
13121213121476Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
1121117Adenylosuccinate synthetase
1111116Asparaginase, N-terminal
23233316Peptidase S24-like
1111116Inorganic pyrophosphatase
17861971875Glycosyl hydrolases family 16
44544425Glycosyl hydrolases family 15
403537333439218NADH:flavin oxidoreductase / NADH oxidase family
11121173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
22222212Glycosyl hydrolase family 20, catalytic domain
56455732HhH-GPD superfamily base excision DNA repair protein
1111116AIR carboxylase
767258695964398GMC oxidoreductase
22122211Asparagine synthase
1012101410965Fungal cellulose binding domain
67677740Septin
1111116EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
84476736Flavin-binding monooxygenase-like
44344423tRNA synthetases class I (E and Q), catalytic domain
1111318tRNA synthetases class I (R)
1065861045XPG N-terminal domain
91713916973Metallo-beta-lactamase superfamily
112F5/8 type C domain
45645428Choline/Carnitine o-acyltransferase
2112129Putative esterase
1111116Glycosyl hydrolase family 9
1111116Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
11Autoinducer synthase
1111116Electron transfer flavoprotein FAD-binding domain
33333318RNB domain
192222202120124Dioxygenase
64364629CNH domain
22122211Diacylglycerol kinase catalytic domain
14151115141584Dual specificity phosphatase, catalytic domain
1211117MyTH4 domain
45465428P21-Rho-binding domain
17161117151793PX domain
23323316Ras association (RalGDS/AF-6) domain
34454323UBX domain
55465631VHS domain
1111116Phosphoinositide 3-kinase C2
33733322DAHP synthetase I family
88788847Carbon-nitrogen hydrolase
122229N-acetyltransferase
1113Prephenate dehydratase
46636328Syntaxin
55545529Pumilio-family RNA binding repeat
75387737Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
1311118ER lumen protein retaining receptor
23232214Glycoprotease family
1111116Histidinol dehydrogenase
33443320impB/mucB/samB family
1113
1111116Ribosomal L15
31231313Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
122229Ribosomal L39 protein
2112118Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
54443525Glycosyl hydrolase family 7
22322213RNA pseudouridylate synthase
1015910141169Histone deacetylase domain
45343322POT family
21223313PWWP domain
342714362735173SET domain
53253523Isochorismatase family
33334420Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
232210151520105XPG I-region
32222314Acetokinase family
2111117DNA photolyase
1113Cation-independent mannose-6-phosphate receptor repeat
1111116Cytosol aminopeptidase family, catalytic domain
111115Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
33333318Acyl CoA binding protein
1098129957Cullin family
1111116Elongation factor TS
5107412543FAD binding domain
13131116121378O-methyltransferase domain
810489746EamA-like transporter family
5229
77777742ThiF family
1111116Ribosomal family S4e
1111116Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
45545427Ammonium Transporter Family
56455530Sulfate permease family
1111116MATH domain
22222212Dehydratase family
33333318Transaldolase/Fructose-6-phosphate aldolase
44444424Mechanosensitive ion channel
2112129GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
44444424Adaptor complexes medium subunit family
88688846Exonuclease
22221110Dipeptidyl peptidase IV (DPP IV) N-terminal region
1317333NB-ARC domain
14121312121275Glycosyl hydrolase family 3 N terminal domain
1121117Ribosomal protein L44
1113Sodium:sulfate symporter transmembrane region
1111116DNA-dependent RNA polymerase
111115Glycosyl transferase family 4
1111116HCO3- transporter family
33232215Nucleosome assembly protein (NAP)
55555530Synaptobrevin
1111116GMP synthase C terminal domain
55444527Adenosine/AMP deaminase
33333318Oxidoreductase FAD-binding domain
181571991987Thioesterase domain
22122211Histidine biosynthesis protein
33354422Glycosyltransferase family 20
1111116UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
112PAS fold
22222212Probable molybdopterin binding domain
44444424Sec1 family
22222212GDP dissociation inhibitor
98788949Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
36343423Initiation factor 2 subunit family
22222212Electron transfer flavoprotein domain
1111116Ribosomal S3Ae family
111115Ribosomal L27 protein
1111116GTP1/OBG
22222212Gamma-glutamyltranspeptidase
111115Ribosomal L40e family
1111116GrpE
139686951TatD related DNase
2112129Inhibitor of apoptosis-promoting Bax1
1111116Eukaryotic DNA topoisomerase I, catalytic core
11NusB family
14351141148Dynamin central region
221222116-O-methylguanine DNA methyltransferase, DNA binding domain
23322214Carboxyl transferase domain
2014917121284UbiA prenyltransferase family
33133316Endoribonuclease L-PSP
61131315Phosphorylase superfamily
112Mannose-6-phosphate isomerase
10121312121170Cys/Met metabolism PLP-dependent enzyme
65556734Glycosyl hydrolases family 31
1111116NADH ubiquinone oxidoreductase, 20 Kd subunit
16151512151588ABC-2 type transporter
55515Bestrophin, RFP-TM, chloride channel
53353423Amino-transferase class IV
44444323CDP-alcohol phosphatidyltransferase
1311118Calpain large subunit, domain III
55555530ATP dependent DNA ligase domain
66866638FMN-dependent dehydrogenase
1111116Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
324225183-beta hydroxysteroid dehydrogenase/isomerase family
1111