PFAM Domains • Radiomyces spectabilis NRRL 2753 v1.0
Annotations/GenomesAbsrep1Bacci1Blatri1Hesve2finisherSCLiccor1Lichy1Mucci2Mycafr1Parpar1Phybl2Radspe1Rhich1Rhimi1_1Rhimi_ATCC11559_1Rhimi_ATCC52814_1Rhior3Synrac1Thaele1Umbra1Zyghet1TotalAnnotation Description
PFAMs
14,49913,47810,5248,61312,79910,4669,58410,06011,3919,21610,79215,2568,6268,4788,51212,21810,79811,9138,51512,692218,430
117 transmembrane receptor (rhodopsin family)
2111277 transmembrane receptor (Secretin family)
45223143334531313534627 transmembrane sweet-taste receptor of 3 GCPR
5953404442454437424842653837375146434050903ATPase family associated with various cellular activities (AAA)
5467404256605236464837603432334437463547906ABC transporter
161288105969125478611810713174ATP synthase alpha/beta family, nucleotide-binding domain
113211110EGF-like domain
3325201922191721192117301817192421201821421Elongation factor Tu GTP binding domain
7075373147513735443538743942405233443152907Helix-loop-helix DNA-binding domain
144327332147773342480Hsp20/alpha crystallin family
271914101714111420121718101010181427917308Hsp70 protein
201991511151410111211221314131612111314275KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
111111111110SH2 domain
5589324745654139353732914848505534384539965SH3 domain
1316121011121114141111181111111511121014248Actin
1571144610514214937129545464965686411710Ankyrin repeat
13158991112910101013998111012913210ADP-ribosylation factor family
3135192831272718213320382020203523242332525Eukaryotic aspartyl protease
1077689756771277797768149Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
1135Cytochrome b/b6/petB
4211231211132122211235Cytochrome c
2112231111111111222128Double-stranded RNA binding motif
2542346444321353553331344812341465EF hand
111211411151204Fe-4S binding domain
221121111111111119Fibronectin type III domain
1421222422221128Globin
920314812137873191110912571510202Glutathione S-transferase, C-terminal domain
4632123133363334441564Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
3255212526372722232825512928293720231827583Homeodomain
6834565555663334553595lactate/malate dehydrogenase, NAD binding domain
22Lectin C-type domain
182115131615171417161428161616191216816323Myosin head (motor domain)
4385323675644120345431633531314850484955925Cytochrome P450
3233582212042912772372132342202133862102072112962132501652534,982Protein kinase domain
1723131320191812171616281515152114161615339Pyridine nucleotide-disulphide oxidoreductase
69825040585960426054548551515165517239651,158Ras family
2630181639331515181818271716162119182021421Response regulator receiver domain
2112121214118RNase H
1151378582106109889191979016596989511283104951012,040RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
814958Retroviral aspartyl protease
6511345470131590Reverse transcriptase (RNA-dependent DNA polymerase)
4553133332363335332265Copper/zinc superoxide dismutase (SODC)
211112111121112111224Iron/manganese superoxide dismutases, alpha-hairpin domain
2331221520191613162418271515162417191121382Subtilase family
4166302842464726342825422222224644374740735Sugar (and other) transporter
2118161216141514151314241614151518141315312Thioredoxin
11Thyroglobulin type-1 repeat
112Trefoil (P-type) domain
6513154222253334226263Trypsin
1113371113878989888114867167Tubulin/FtsZ family, GTPase domain
11von Willebrand factor type A domain
431742710543127140292920328147878688138373869441,682Zinc finger, C2H2 type
4961061670647455777604850417116213753Zinc finger, C3HC4 type (RING finger)
181827153821459177012372318201328131910570Zinc knuckle
57556365655855585735109Protein-tyrosine phosphatase
3349353940454528343330492727263139307140751short chain dehydrogenase
2346251932282921192311392322232831233437536Zinc-binding dehydrogenase
9966961068551155578768141Thiolase, N-terminal domain
3322223432232333222250Beta-ketoacyl synthase, N-terminal domain
251344141844451121552Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
2322332122242222221546Enolase, C-terminal TIM barrel domain
2215Cytochrome C and Quinol oxidase polypeptide I
21115Cytochrome C oxidase subunit II, periplasmic domain
1413108141198910817999991189204Glutamine amidotransferase class-I
2215121113131112111512161110111811131115263TCP-1/cpn60 chaperonin family
213ATP synthase A chain
895567545631055564645113Glutamine synthetase, catalytic domain
2211211111121111111124Triosephosphate isomerase
4949333232263034402634482625263430432539681E1-E2 ATPase
20211415252414141420161314141320141498316Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
121233111114122321638Alpha amylase, catalytic domain
1417101314144911711241113131312111010241Phorbol esters/diacylglycerol binding domain (C1 domain)
118697887758178769781011167Bacterial transferase hexapeptide (six repeats)
76646446746844476647110tRNA synthetases class I (I, L, M and V)
1818151718211814191815332018191713171618362Cyclin, N-terminal domain
2213121321223226237Carboxylesterase family
55554455545844465656100DNA polymerase family B
5833435344484445334586ATP synthase subunit C
11111111111111111219Legume lectin domain
3433224242263333332461Peroxidase
1124Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
112431111211114126Beta-lactamase
2122332214421111212138C-5 cytosine-specific DNA methylase
121116NADH dehydrogenase
4249303535393732363430503330313737362936718Calcineurin-like phosphoesterase
105565533444644445587101Cellulase (glycosyl hydrolase family 5)
885676666661066676667130tRNA synthetases class II (D, K and N)
74805652616663536154609052545363536445721,226Mitochondrial carrier protein
11recA bacterial DNA recombination protein
2427171819212018202019341818182220201522410Aminotransferase class I and II
714410613136711616101010155796185Phosphoribosyl transferase domain
1415141313151514151413271618171713151115304Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111222111121112211227Phosphoglycerate kinase
5333343333423435333366Ribosomal protein S4/S9 N-terminal domain
8443544344464446343384Ribosomal protein S12/S23
22Bacterial regulatory helix-turn-helix proteins, AraC family
212112122111111111225Chaperonin 10 Kd subunit
2436171826322321192219412020202617181920458C2 domain
668532514679442735483910253505360363545301,016PH domain
3848311736322827311930492630293827361339624bZIP transcription factor
2120141622251513151217221212121518161318328Aldehyde dehydrogenase family
88924358778046405747407752374630564660541,126Fungal Zn(2)-Cys(6) binuclear cluster domain
4160313333424131343930693739384129313040769Cytochrome b5-like Heme/Steroid binding domain
122243212111111212131Oxidoreductase molybdopterin binding domain
1519141413171612141311231313131414141415291Oxidoreductase NAD-binding domain
2926212423242022242027362222222623222127481SNF2 family N-terminal domain
5443354343463335343476Ribosomal protein S7p/S5e
3226182023232222222020432222222618232025469Ubiquitin-conjugating enzyme
911769108678712777979610162Isocitrate/isopropylmalate dehydrogenase
6643345444544445454587Ribosomal Proteins L2, RNA binding domain
4543454344384445543585Hsp90 protein
5423123226342224232256Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
2222222222242221122139Dihydrofolate reductase
344138613114222231031174Cysteine-rich secretory protein family
6543445454533443342580Ribosomal protein S3, C-terminal domain
56544563545644463646952-oxoacid dehydrogenases acyltransferase (catalytic domain)
3752334342463334353474Catalase
4632323332322223233255Disintegrin
820103851059141175712212511155UDP-glucoronosyl and UDP-glucosyl transferase
68664565668955566556118Aminotransferase class-III
5753444344343235443478Ribosomal protein S19
1111111111121111111121DNA gyrase B
47432265533433353103684Thiamine pyrophosphate enzyme, central domain
6445444444563334644586Lyase
5523233233373333333365Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
2121222222432223224244Ferritin-like domain
3422432222242223221248Adenylate and Guanylate cyclase catalytic domain
2211121111121112111125ATP synthase delta (OSCP) subunit
1111111111111111111120Orotidine 5'-phosphate decarboxylase / HUMPS family
2211211111111111111224Indole-3-glycerol phosphate synthase
5433443333363335342269Pyruvate kinase, barrel domain
4136262533292824292030462826283322261830578Kinesin motor domain
4645323436353933423437673735353832403038765DnaJ domain
2417141414141414141414261414142614141316318Proteasome subunit
3122222222111112234642Major intrinsic protein
22211212212111212228ATP synthase
22Glycosyl hydrolase family 1
121265118877679666857381473'5'-cyclic nucleotide phosphodiesterase
111111111132222111226Profilin
5543444345484445342685Ribosomal protein L22p/L17e
5433443333343336333268Ribosomal protein L14p/L23e
1931201622232217172320352120192817212035446Ubiquitin family
777688667461266686766135Cofilin/tropomyosin-type actin-binding protein
663386333338444734358914-3-3 protein
5533554333453334342676Alkaline phosphatase
22Zinc carboxypeptidase
2542151631292612182019341818181925152827455Aldo/keto reductase family
2939183119372324192024613331313318212526562Myb-like DNA-binding domain
12141010910109101091367712710710192Forkhead domain
111126Glycosyl hydrolases family 32 N-terminal domain
1141711441421112341448Ribosomal protein L16p/L10e
8533144434323334333470Ribosomal protein S14p/S29e
1095777654671055567677131FKBP-type peptidyl-prolyl cis-trans isomerase
2221121222132223121236Glutathione peroxidase
5445364344345
92110171117158913920111011141091412250Flavodoxin
2111111112121112111124Calreticulin family
696576768559545577711130Aminotransferase class-V
2311223231221112121336Ribonucleotide reductase, small chain
61525247595148585247548547474957555545601,081DEAD/DEAH box helicase
949977808688818084748212877787884828275861,695Helicase conserved C-terminal domain
1211111111121111111122EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
6533544443443335343477Ribosomal protein L23
231133111111112211330Pyridoxal-dependent decarboxylase, C-terminal sheet domain
6543343335554447343583Ribosomal protein L5
5644544345453334446484Pyridoxal-dependent decarboxylase conserved domain
4221321222221111231338Citrate synthase, C-terminal domain
676656666661266666666126GHMP kinases N terminal domain
1112781111119911716889991089193Biotin carboxylase, N-terminal domain
1111111111121112111122Tryptophan synthase alpha chain
101299891099991599910991113197Pyridoxal-phosphate dependent enzyme
156'Paired box' domain
2126171816182320201617392020212318221523413NUDIX domain
5106636766651066665667124pfkB family carbohydrate kinase
563529775518853694Glycosyl hydrolases family 28
5543224343353335342571Ribosomal protein L3
8634444445474447444593Ribosomal protein L11, RNA binding domain
12138810111110111110161010107891010205Histidine phosphatase superfamily (branch 1)
2111111111121111111122Thymidylate synthase
11Gamma-thionin family
161188108969125376611810712172ATP synthase alpha/beta chain, C terminal domain
161371022161271091221129991313818246Calponin homology (CH) domain
21115Bacterial dnaA protein
7103769124564966684557129Glutamine amidotransferases class-II
5332343222363335333263Ribosomal protein S15
321113212212111222131'Cold-shock' DNA-binding domain
673611843554844464545106Thaumatin family
111311111121112111123Fructose-1-6-bisphosphatase, N-terminal domain
4522334442263333242465Ribonucleotide reductase, all-alpha domain
6753334344443326353580Ribosomal protein S2
141487121310109761499996969190SRF-type transcription factor (DNA-binding and dimerisation domain)
5265363051433632383528683937403933432244811GATA zinc finger
123572451921810197341818182489258329Amino acid permease
7977556676712666766810139Prolyl oligopeptidase family
5643665555684447361497Ribosomal protein L30p/L7e
3643255432474555335482Histidine phosphatase superfamily (branch 2)
1211221111121111111124Respiratory-chain NADH dehydrogenase, 30 Kd subunit
66445664656955564568111Aconitase family (aconitate hydratase)
11Glycosyl hydrolase family 10
342234331223222535253Glycosyl hydrolases family 17
7543254435433336333477Ribosomal protein S5, N-terminal domain
66556466645955555636108Nucleoside diphosphate kinase
67441266565523441544699Tetraspanin family
6333333333363336332368Ribosomal protein S10p/S20e
4546291732252225332235322016