PFAM Domains • Phellinus igniarius CCBS 575 v1.0
Annotations/GenomesFomme1Onnsc1Phefer1Pheign1_1Porchr1Pornie1_2Ricfib1Ricmel1Schpa1Triab1_1TotalAnnotation Description
PFAMs
7,6007,2089,2909,36610,12610,55211,8318,9458,8588,60592,381
1127 transmembrane receptor (rhodopsin family)
41424654484546415147461ATPase family associated with various cellular activities (AAA)
37445344475365715451519ABC transporter
4155445544454ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
14141515141418181616154Elongation factor Tu GTP binding domain
12111113131112111210116Helix-loop-helix DNA-binding domain
76771613567882Hsp20/alpha crystallin family
91329151411281997154Hsp70 protein
8858768118978KH domain
11114SH2 domain
28281315151819352629226SH3 domain
11u-PAR/Ly-6 domain
12202514141514131213152Actin
2023625912422823170Ankyrin repeat
777777101181384ADP-ribosylation factor family
35463263414458552737438Eukaryotic aspartyl protease
332333333329Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
111111111110Cytochrome c
8111181111851314100Double-stranded RNA binding motif
151712332222122108EF hand
1111264Fe-4S binding domain
1111111119Fibronectin type III domain
197886913201618124Glutathione S-transferase, C-terminal domain
121111111111Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
99810101111129796Homeodomain
222233222222lactate/malate dehydrogenase, NAD binding domain
544454555748Myosin head (motor domain)
1201161221291261331401362061811,409Cytochrome P450
2441482262552582954003502922512,719Protein kinase domain
171712991011201615136Pyridine nucleotide-disulphide oxidoreductase
24242626272835322424270Ras family
9910910111615129110Response regulator receiver domain
1411561174242RNase H
59615661635960686260609RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
66Reverse transcriptase (RNA-dependent DNA polymerase)
111111111110Copper/zinc superoxide dismutase (SODC)
222233242224Iron/manganese superoxide dismutases, alpha-hairpin domain
581171111158626108Subtilase family
32253848434834242834354Sugar (and other) transporter
121091199131199102Thioredoxin
555457944452Tubulin/FtsZ family, GTPase domain
3257219von Willebrand factor type A domain
54641819212019485661380Zinc finger, C2H2 type
485288101110705758332Zinc finger, C3HC4 type (RING finger)
1414767711132025124Zinc knuckle
224222322223Protein-tyrosine phosphatase
955960638478576497113770short chain dehydrogenase
51313337516326324253419Zinc-binding dehydrogenase
565555544448Thiolase, N-terminal domain
6710654682660Beta-ketoacyl synthase, N-terminal domain
3311111333202Fe-2S iron-sulfur cluster binding domain
211111212113Enolase, C-terminal TIM barrel domain
33Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
88881112878785Glutamine amidotransferase class-I
1311441012141018109151TCP-1/cpn60 chaperonin family
112ATP synthase A chain
333333333330Glutamine synthetase, catalytic domain
111111111110Triosephosphate isomerase
12111613121523121111136E1-E2 ATPase
16171217181614181718163Core histone H2A/H2B/H3/H4
111231110Copper binding proteins, plastocyanin/azurin family
576811107711981Alpha amylase, catalytic domain
553455965552Phorbol esters/diacylglycerol binding domain (C1 domain)
244433656340Bacterial transferase hexapeptide (six repeats)
333555554341tRNA synthetases class I (I, L, M and V)
8109119916101110103Cyclin, N-terminal domain
22121723212220181724196Carboxylesterase family
333333543333DNA polymerase family B
243433333331ATP synthase subunit C
1861618192225261917186Peroxidase
114647434539Beta-lactamase
544444445442C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
30232726212829282626264Calcineurin-like phosphoesterase
15132223262328191218199Cellulase (glycosyl hydrolase family 5)
555775775558tRNA synthetases class II (D, K and N)
34363434364044413440373Mitochondrial carrier protein
11recA bacterial DNA recombination protein
14111415151614141314140Aminotransferase class I and II
554444476649Phosphoribosyl transferase domain
12121112121414121311123Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111110Phosphoglycerate kinase
221222222219Ribosomal protein S4/S9 N-terminal domain
321222223221Ribosomal protein S12/S23
111111111110Chaperonin 10 Kd subunit
29171219262416151215185C2 domain
182110121089241921152PH domain
661199101078682bZIP transcription factor
16151319181814181516162Aldehyde dehydrogenase family
82736159758710112311890869Fungal Zn(2)-Cys(6) binuclear cluster domain
21232119222724232022222Cytochrome b5-like Heme/Steroid binding domain
22211111314Oxidoreductase molybdopterin binding domain
6776778810773Oxidoreductase NAD-binding domain
20222225232438282224248SNF2 family N-terminal domain
222222222220Ribosomal protein S7p/S5e
21212024212226212620222Ubiquitin-conjugating enzyme
667767866665Isocitrate/isopropylmalate dehydrogenase
222222222220Ribosomal Proteins L2, RNA binding domain
322234222224Hsp90 protein
322234222123Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111110Dihydrofolate reductase
112Chitin recognition protein
121322224221Cysteine-rich secretory protein family
111111211111Ribosomal protein S3, C-terminal domain
223221553530Cupin
3433353433342-oxoacid dehydrogenases acyltransferase (catalytic domain)
222222232423Catalase
1111111119Disintegrin
7115589311252UDP-glucoronosyl and UDP-glucosyl transferase
555565555551Aminotransferase class-III
222222322221Ribosomal protein S19
111111111110DNA gyrase B
323333333430Thiamine pyrophosphate enzyme, central domain
333333333330Lyase
122222221218Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
311111111112Adenylate and Guanylate cyclase catalytic domain
111111221112ATP synthase delta (OSCP) subunit
111111111110Orotidine 5'-phosphate decarboxylase / HUMPS family
221211112114Indole-3-glycerol phosphate synthase
111112111212Aromatic amino acid lyase
111111111110Pyruvate kinase, barrel domain
109910911101091198Kinesin motor domain
27292727303628303228294DnaJ domain
14141414161616141416148Proteasome subunit
223422124325Major intrinsic protein
111211111111ATP synthase
524345114332Glycosyl hydrolase family 1
1111111111103'5'-cyclic nucleotide phosphodiesterase
111111111110Profilin
222222211218Ribosomal protein L22p/L17e
222221432222Ribosomal protein L14p/L23e
16161613172123271815182Ubiquitin family
565658564656Cofilin/tropomyosin-type actin-binding protein
222222157223814-3-3 protein
1123411Alkaline phosphatase
111111111110Zinc carboxypeptidase
56254331465047435559455Aldo/keto reductase family
11138687611131598Myb-like DNA-binding domain
566666665759Forkhead domain
112Glycosyl hydrolases family 32 N-terminal domain
142221211117Ribosomal protein L16p/L10e
122222222219Ribosomal protein S14p/S29e
333333433331FKBP-type peptidyl-prolyl cis-trans isomerase
111111111110Glutathione peroxidase
221117
774566578560Flavodoxin
11Protamine P1
111111111110Calreticulin family
15451218Common central domain of tyrosinase
6776910787673Aminotransferase class-V
111111855226Ribonucleotide reductase, small chain
41444852495163606256526DEAD/DEAH box helicase
697576807880106999689848Helicase conserved C-terminal domain
111712111117Fructose-bisphosphate aldolase class-I
111111111110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222322232222Ribosomal protein L23
111111111110Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111231113Ribosomal protein L5
466344866653Pyridoxal-dependent decarboxylase conserved domain
324445433335Citrate synthase, C-terminal domain
563555555549GHMP kinases N terminal domain
6766109666870Biotin carboxylase, N-terminal domain
111111111110Tryptophan synthase alpha chain
878789997880Pyridoxal-phosphate dependent enzyme
15141316191717151314153NUDIX domain
444444665445pfkB family carbohydrate kinase
141699122619512113Glycosyl hydrolases family 28
222222662228Ribosomal protein L3
132222222220Ribosomal protein L11, RNA binding domain
7111077910109787Histidine phosphatase superfamily (branch 1)
111111111110Thymidylate synthase
4124445544450ATP synthase alpha/beta chain, C terminal domain
443446443440Calponin homology (CH) domain
553333355540Glutamine amidotransferases class-II
222222222220Ribosomal protein S15
834678421548Thaumatin family
111111111110Fructose-1-6-bisphosphatase, N-terminal domain
111111111211Ribonucleotide reductase, all-alpha domain
322299322236Ribosomal protein S2
133233223224SRF-type transcription factor (DNA-binding and dimerisation domain)
9999991012121199GATA zinc finger
2120488126152123138Amino acid permease
669558666663Prolyl oligopeptidase family
112222221116Ribosomal protein L30p/L7e
1086131314981110102Histidine phosphatase superfamily (branch 2)
111111111110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
745555444548Aconitase family (aconitate hydratase)
4444551151043Glycosyl hydrolase family 10
111111111110Glycosyl hydrolases family 17
222122222219Ribosomal protein S5, N-terminal domain
222222122219Nucleoside diphosphate kinase
324344624133Tetraspanin family
222222221219Ribosomal protein S10p/S20e
355454873347Arrestin (or S-antigen), N-terminal domain
111111111110Phosphoglucose isomerase
111111111110Carbohydrate phosphorylase
111124111114SecY translocase
111111111110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222222220Ribosomal protein L6
333333454536Polyprenyl synthetase
221222522222Hexokinase
77128121211711794Dynamin family
111111111110Transcription factor TFIID (or TATA-binding protein, TBP)
555557343547Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
111115Phytochrome region
336Proton-conducting membrane transporter
8981291098101396Biotin-requiring enzyme
111111111110Phosphofructokinase
222222332222Ribosomal protein S17
112121341117Hydroxymethylglutaryl-coenzyme A reductase
444333343435FGGY family of carbohydrate kinases, N-terminal domain
12998101110991097Enoyl-CoA hydratase/isomerase
222222222220Ribosomal protein S9/S16
422222233224Transcription factor TFIIB repeat
587777987873Cytidine and deoxycytidylate deaminase zinc-binding region
211111111111Molybdopterin oxidoreductase
11588108712151094Chromo (CHRromatin Organisation MOdifier) domain
121222222420Phosphatidylinositol-specific phospholipase C, Y domain
142333322427Phosphatidylinositol-specific phospholipase C, X domain
677666667663D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222222222220Malic enzyme, N-terminal domain
1111111112116-phosphogluconate dehydrogenase, C-terminal domain
11861477101061897Multicopper oxidase
910910101010109996WW domain
222222222220Ribosomal RNA adenine dimethylase
1901311331321611341791951721511,578WD domain, G-beta repeat
333333333330Heavy-metal-associated domain
333333333330Adenylate kinase
222533221224Phosphoglucomutase/phosphomannomutase, C-terminal domain
112322212117Ribosomal protein S8
122232222119Ribosomal protein S11
756555556655LIM domain
11Matrixin
2367811754558Regulator of chromosome condensation (RCC1) repeat
223222222221Ribosomal protein S13/S18
11
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
222222222220chorismate binding enzyme
33333348433760s Acidic ribosomal protein
544544474445Prenyltransferase and squalene oxidase repeat
775556777662Protein kinase C terminal domain
1111111119Single-strand binding protein family
111111111110S-adenosylmethionine synthetase, N-terminal domain
12101010121112111010108Bromodomain
88878812129989Acyl-CoA dehydrogenase, C-terminal domain
14141517191715161515157Ubiquitin carboxyl-terminal hydrolase
1111111119Ribosomal protein L36
423343223430Ribonuclease T2 family
444444793447HSF-type DNA-binding
222222222220SRP54-type protein, GTPase domain
11111221111Urease alpha-subunit, N-terminal domain
14141511131613161919150Serine carboxypeptidase
88998810109887Phosphatidylinositol 3- and 4-kinase
111111111110Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
11111117WHEP-TRS domain
322222222221Inositol monophosphatase family
445444444441Glutaredoxin
332222233325Isocitrate lyase family
1111111119Serine hydroxymethyltransferase
334444333334Iron-containing alcohol dehydrogenase
112222222218Ribosomal protein L10
565455575552KOW motif
111111111110Ribosomal protein L34
11114Ribosomal protein L33
234544442436RF-1 domain
225332212426Sodium:solute symporter family
111111121111Imidazoleglycerol-phosphate dehydratase
111111111110DNA polymerase family A
143113111117IMP dehydrogenase / GMP reductase domain
111111111110Glucose-6-phosphate dehydrogenase, NAD binding domain
88988815139995Protein phosphatase 2C
434443382338Nucleotidyl transferase
233222334428Carbonic anhydrase
111111111110Phosphoribulokinase / Uridine kinase family
8687861089979Fatty acid desaturase
666767666662MutS domain V
111111111110Delta-aminolevulinic acid dehydratase
345433453438Arginase family
6766671266668MCM P-loop domain
112434321122Squalene/phytoene synthase
9108101191513910104FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
26293027353233273144314AMP-binding enzyme
12121312131220171513139G-protein alpha subunit
24172517223214181727213HMG (high mobility group) box
112NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1124Cytochrome c oxidase subunit III
56567612117873His Kinase A (phospho-acceptor) domain
223333454332Armadillo/beta-catenin-like repeat
63231311151421653636297Tetratricopeptide repeat
343333333432Ion transport protein
111111111110DNA gyrase/topoisomerase IV, subunit A
9865586971174BRCA1 C Terminus (BRCT) domain
586655676458Glycosyl transferases group 1
332223453633Glycosyl transferase family 2
11114SAM domain (Sterile alpha motif)
444335333335linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
1311129Pectate lyase
112111111111ribonuclease
1111111119Urease, gamma subunit
333333333330CoA-ligase
81015271210131068119Phosphopantetheine attachment site
222222232221Formyl transferase
1091110111212101010105Metallopeptidase family M24
15153333316161592Leucine Rich Repeat
49338611116374548254alpha/beta hydrolase fold
333343333331RNA polymerase Rpb2, domain 6
3545810544452PB1 domain
222283222227Staphylococcal nuclease homologue
9913121211121099106Rab-GTPase-TBC domain
111111111110Tudor domain
111111111110WH1 domain
349333664647Zinc finger, ZZ type
111111111110HRDC domain
8896576108875CBS domain
222222322221Ribosomal protein L13
2133223222233Ribosomal protein L4/L1 family
1111111119Clp protease
434443444438S1 RNA binding domain
11111111210HIUase/Transthyretin family
454444445543AhpC/TSA family
444444444440tRNA synthetases class I (W and Y)
111115UvrD/REP helicase N-terminal domain
33710991044463Rhodanese-like domain
222122222219Universal stress protein family
28261714171523383627241Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111111110C-terminal regulatory domain of Threonine dehydratase
222222222220AIR synthase related protein, N-terminal domain
665540335776120tRNA synthetase class II core domain (G, H, P, S and T)
522232222224Tetrapyrrole (Corrin/Porphyrin) Methylases
111112111111Glycosyl transferase family, a/b domain
4343613326347Class II Aldolase and Adducin N-terminal domain
345444534339Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
555455555549Fes/CIP4, and EFC/F-BAR homology domain
352333366539IQ calmodulin-binding motif
222222222220Phosphoinositide 3-kinase family, accessory domain (PIK domain)
33211344425Phospholipase D Active site motif
116443311125Regulator of G protein signaling domain
444444555443GTPase-activator protein for Ras-like GTPase
6999910111413898RasGEF domain
77767781210879RasGEF N-terminal motif
14131112131318171312136RhoGAP domain
12141615171718161413152RhoGEF domain
434445445643SPRY domain
3353411463345RNA polymerase Rpb1, domain 2
11111122111Guanylate kinase
233333435231Gelsolin repeat
87776851210777UBA/TS-N domain
15191520151718191918175PHD-finger
22222222218GGL domain
555556555551HECT-domain (ubiquitin-transferase)
22111122214Helix-hairpin-helix motif
111111441116MSP (Major sperm protein) domain
462433456643Ribonuclease III domain
224344722232Region in Clathrin and VPS
133333433329RanBP1 domain
221121362222PPIC-type PPIASE domain
11Phosphotyrosine interaction domain (PTB/PID)
3132323320Zn-finger in Ran binding protein and others
20221010121313232120164Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1111116B-box zinc finger
143111445529Poly(ADP-ribose) polymerase catalytic domain
131222322220Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
84951623212328211325