PFAM Domains • Coccidioides immitis RS
Annotations/GenomesAspca3Aspni5Aspnid1Aspor1Cocim1Eurhe1Pench1TotalAnnotation Description
PFAMs
9,7327,8769,0749,7366,7718,2129,14060,541
43384243404040286ATPase family associated with various cellular activities (AAA)
72624982414854408ABC transporter
445444429ATP synthase alpha/beta family, nucleotide-binding domain
1113EGF-like domain
1314131614141498Elongation factor Tu GTP binding domain
991310891068Helix-loop-helix DNA-binding domain
435322524Hsp20/alpha crystallin family
8787127756Hsp70 protein
878788854KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
1111116SH2 domain
20242321232223156SH3 domain
117101110101069Actin
447659105475159441Ankyrin repeat
42219PAN domain
777877851ADP-ribosylation factor family
1511101346867Eukaryotic aspartyl protease
554454431Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
1111116Cytochrome c
232312215Double-stranded RNA binding motif
17211819221716130EF hand
1212221114Fe-4S binding domain
233122215Fibronectin type III domain
12221311Globin
171212187131493Glutathione S-transferase, C-terminal domain
222311112Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
112Hemopexin
967767749Homeodomain
344223422lactate/malate dehydrogenase, NAD binding domain
213Low-density lipoprotein receptor repeat class B
345555431Myosin head (motor domain)
1311321141494177104748Cytochrome P450
14512210411514695145872Protein kinase domain
18151919111615113Pyridine nucleotide-disulphide oxidoreductase
24222324262323165Ras family
1413191591717104Response regulator receiver domain
4310511529RNase H
55636561676465440RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
207128Reverse transcriptase (RNA-dependent DNA polymerase)
232212315Copper/zinc superoxide dismutase (SODC)
222112212Iron/manganese superoxide dismutases, alpha-hairpin domain
8434175546Subtilase family
921521061152661112664Sugar (and other) transporter
9119158101173Thioredoxin
11221119Trypsin
447644433Tubulin/FtsZ family, GTPase domain
312122415von Willebrand factor type A domain
74656240586575439Zinc finger, C2H2 type
43313933424239269Zinc finger, C3HC4 type (RING finger)
1910812848Zinc knuckle
232322216Protein-tyrosine phosphatase
16414114115054114117881short chain dehydrogenase
1081187399277879582Zinc-binding dehydrogenase
977657647Thiolase, N-terminal domain
31503736131425206Beta-ketoacyl synthase, N-terminal domain
5554455332Fe-2S iron-sulfur cluster binding domain
11111218Enolase, C-terminal TIM barrel domain
123Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
99891081164Glutamine amidotransferase class-I
10910910101068TCP-1/cpn60 chaperonin family
11ATP synthase A chain
543835331Glutamine synthetase, catalytic domain
222222214Triosephosphate isomerase
18171820161320122E1-E2 ATPase
9778167761Core histone H2A/H2B/H3/H4
17151216451685Alpha amylase, catalytic domain
212242215Phorbol esters/diacylglycerol binding domain (C1 domain)
9101099101168Bacterial transferase hexapeptide (six repeats)
373333325tRNA synthetases class I (I, L, M and V)
6107777751Cyclin, N-terminal domain
4142244251721192Carboxylesterase family
444444428DNA polymerase family B
646535534ATP synthase subunit C
433332321Peroxidase
910816511261Beta-lactamase
222143216C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
30292829272731201Calcineurin-like phosphoesterase
7712941150Cellulase (glycosyl hydrolase family 5)
777778750tRNA synthetases class II (D, K and N)
43393843353942279Mitochondrial carrier protein
1113recA bacterial DNA recombination protein
26222235192325172Aminotransferase class I and II
9881078959Phosphoribosyl transferase domain
1112111210101177Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
11211118Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
1212129Bacterial regulatory helix-turn-helix proteins, AraC family
1111116Chaperonin 10 Kd subunit
1110111016101179C2 domain
18152014161715115PH domain
99106711961bZIP transcription factor
33292830142837199Aldehyde dehydrogenase family
3452423051881002593091,748Fungal Zn(2)-Cys(6) binuclear cluster domain
27292830192627186Cytochrome b5-like Heme/Steroid binding domain
353424223Oxidoreductase molybdopterin binding domain
19251722101619128Oxidoreductase NAD-binding domain
26252428242225174SNF2 family N-terminal domain
222222214Ribosomal protein S7p/S5e
22212121222020147Ubiquitin-conjugating enzyme
898978857Isocitrate/isopropylmalate dehydrogenase
222122213Ribosomal Proteins L2, RNA binding domain
11111117Hsp90 protein
212222213Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
447113121Chitin recognition protein
22222212Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
433221217Cupin
223221214Annexin
11114Eukaryotic-type carbonic anhydrase
13116Chalcone and stilbene synthases, N-terminal domain
66Bacterial regulatory proteins, luxR family
5434343262-oxoacid dehydrogenases acyltransferase (catalytic domain)
13946211853Catalase
212212111Disintegrin
31149UDP-glucoronosyl and UDP-glucosyl transferase
8881367959Aminotransferase class-III
221122212Ribosomal protein S19
11111117DNA gyrase B
13861368963Thiamine pyrophosphate enzyme, central domain
454434327Lyase
222222214Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1113Sodium:neurotransmitter symporter family
112Ferritin-like domain
1111116Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
211212110Orotidine 5'-phosphate decarboxylase / HUMPS family
22111119Indole-3-glycerol phosphate synthase
53241116Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
1111111110101175Kinesin motor domain
28272723272627185DnaJ domain
17131514141414101Proteasome subunit
755925639Major intrinsic protein
11111117ATP synthase
33331316Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
21111129Profilin
11111117Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
87118119963Ubiquitin family
544435732Cofilin/tropomyosin-type actin-binding protein
22222221414-3-3 protein
224554426Alkaline phosphatase
112231212Zinc carboxypeptidase
43374044143134243Aldo/keto reductase family
13141715141516104Myb-like DNA-binding domain
344444427Forkhead domain
34334623Glycosyl hydrolases family 32 N-terminal domain
11111117Ribosomal protein L16p/L10e
212122212Ribosomal protein S14p/S29e
345453428FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
111222211
81171057654Flavodoxin
21111118Calreticulin family
1259833545Common central domain of tyrosinase
836955844Aminotransferase class-V
11111117Ribonucleotide reductase, small chain
36453941394139280DEAD/DEAH box helicase
68727079747170504Helicase conserved C-terminal domain
11121118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222122213Ribosomal protein L23
111522214Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11112118Ribosomal protein L5
7861266752Pyridoxal-dependent decarboxylase conserved domain
643424326Citrate synthase, C-terminal domain
555555535GHMP kinases N terminal domain
778868852Biotin carboxylase, N-terminal domain
531312217Tryptophan synthase alpha chain
15141419121417105Pyridoxal-phosphate dependent enzyme
14161420101720111NUDIX domain
946655843pfkB family carbohydrate kinase
192211182577Glycosyl hydrolases family 28
112116Luciferase-like monooxygenase
322222215Ribosomal protein L3
212222213Ribosomal protein L11, RNA binding domain
14891412111381Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
445444429ATP synthase alpha/beta chain, C terminal domain
555475536Calponin homology (CH) domain
855745539Glutamine amidotransferases class-II
222222214Ribosomal protein S15
11'Cold-shock' DNA-binding domain
11111117Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222222214Ribosomal protein S2
142242419SRF-type transcription factor (DNA-binding and dimerisation domain)
867856747GATA zinc finger
71625271303664386Amino acid permease
616444328Prolyl oligopeptidase family
22122211Ribosomal protein L30p/L7e
1511914771174Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
786747645Aconitase family (aconitate hydratase)
2342314Glycosyl hydrolase family 10
424433525Glycosyl hydrolases family 17
222212112Ribosomal protein S5, N-terminal domain
11111117Nucleoside diphosphate kinase
123Galactoside-binding lectin
222212213Ribosomal protein S10p/S20e
736637537Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
2111117Carbohydrate phosphorylase
11111117SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
81181156756Polyprenyl synthetase
865657643Hexokinase
797987855Dynamin family
11111117Transcription factor TFIID (or TATA-binding protein, TBP)
9999291057Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
1111116Phytochrome region
11Proton-conducting membrane transporter
1089117101065Biotin-requiring enzyme
11121118Phosphofructokinase
1111116Ribosomal protein S17
542511321Hydroxymethylglutaryl-coenzyme A reductase
534444529FGGY family of carbohydrate kinases, N-terminal domain
11Hemocyanin, copper containing domain
112Sodium:dicarboxylate symporter family
11MerR family regulatory protein
89151814111489Enoyl-CoA hydratase/isomerase
222222214Ribosomal protein S9/S16
222222214Transcription factor TFIIB repeat
7578661049Cytidine and deoxycytidylate deaminase zinc-binding region
212212212Molybdopterin oxidoreductase
41194105548Chromo (CHRromatin Organisation MOdifier) domain
222222214Phosphatidylinositol-specific phospholipase C, Y domain
232232216Phosphatidylinositol-specific phospholipase C, X domain
11811101081068D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222212213Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
2222122136-phosphogluconate dehydrogenase, C-terminal domain
11158827960Multicopper oxidase
5810799957WW domain
11111128Ribosomal RNA adenine dimethylase
108116112117101108114776WD domain, G-beta repeat
544554532Heavy-metal-associated domain
533343324Adenylate kinase
232422217Phosphoglucomutase/phosphomannomutase, C-terminal domain
221221111Ribosomal protein S8
11111117Ribosomal protein S11
444444327LIM domain
112Matrixin
223111212Regulator of chromosome condensation (RCC1) repeat
112122211Ribosomal protein S13/S18
11Fimbrial protein
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
352322219chorismate binding enzyme
33333332160s Acidic ribosomal protein
766756542Prenyltransferase and squalene oxidase repeat
6366107644Protein kinase C terminal domain
11111117Single-strand binding protein family
11121219S-adenosylmethionine synthetase, N-terminal domain
466575841Bromodomain
11Bacterial regulatory proteins, tetR family
1010151113121485Acyl-CoA dehydrogenase, C-terminal domain
17151416171515109Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
222212213Ribonuclease T2 family
343333322HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
1112229Urease alpha-subunit, N-terminal domain
15125121071071Serine carboxypeptidase
886778751Phosphatidylinositol 3- and 4-kinase
234313521Transketolase, thiamine diphosphate binding domain
23241113Glycosyl hydrolases family 11
453524427Inositol monophosphatase family
534444428Glutaredoxin
725725533Isocitrate lyase family
322222215Serine hydroxymethyltransferase
653323426Iron-containing alcohol dehydrogenase
122222213Ribosomal protein L10
473254328KOW motif
1111116Ribosomal protein L34
322233217RF-1 domain
444313322Sodium:solute symporter family
12111118Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
112111310IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
876767748Protein phosphatase 2C
11Type II secretion system (T2SS), protein F
422232217Nucleotidyl transferase
333121316Carbonic anhydrase
12121119Phosphoribulokinase / Uridine kinase family
9861055851Fatty acid desaturase
754565638MutS domain V
11111117Delta-aminolevulinic acid dehydratase
764544434Arginase family
666666642MCM P-loop domain
231222113Squalene/phytoene synthase
8688109958FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
74746778394658436AMP-binding enzyme
343433323G-protein alpha subunit
667366640HMG (high mobility group) box
112NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
101014134121376His Kinase A (phospho-acceptor) domain
343333322Armadillo/beta-catenin-like repeat
25303229262527194Tetratricopeptide repeat
222222113Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
11Binding-protein-dependent transport system inner membrane component
11HlyD membrane-fusion protein of T1SS
108101111111172BRCA1 C Terminus (BRCT) domain
149812691068Glycosyl transferases group 1
584542432Glycosyl transferase family 2
1311118SAM domain (Sterile alpha motif)
1111116linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
576103435Pectate lyase
32232113ribonuclease
1112229Urease, gamma subunit
434547532CoA-ligase
42443848162131240Phosphopantetheine attachment site
333324321Formyl transferase
15101211991278Metallopeptidase family M24
1214111215151392Leucine Rich Repeat
41243043233231224alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
433444426PB1 domain
222222214Staphylococcal nuclease homologue
1211111111111279Rab-GTPase-TBC domain
11111117Tudor domain
1111116WH1 domain
524355428Zinc finger, ZZ type
21111219HRDC domain
98108881061CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
334443324S1 RNA binding domain
11111117HIUase/Transthyretin family
11Outer membrane usher protein
663323326AhpC/TSA family
644544431tRNA synthetases class I (W and Y)
11114UvrD/REP helicase N-terminal domain
356344429Rhodanese-like domain
322222215Universal stress protein family
41293534342337233Acetyltransferase (GNAT) family
111115SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
997888857tRNA synthetase class II core domain (G, H, P, S and T)
21111118SpoU rRNA Methylase family
222222214Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
222111110PDZ domain
655535433Class II Aldolase and Adducin N-terminal domain
434444326Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
544445531Fes/CIP4, and EFC/F-BAR homology domain
465555434IQ calmodulin-binding motif
322222215Phosphoinositide 3-kinase family, accessory domain (PIK domain)
556545535Phospholipase D Active site motif
12111118Regulator of G protein signaling domain
333333321GTPase-activator protein for Ras-like GTPase
455645534RasGEF domain
435545531RasGEF N-terminal motif
977777650RhoGAP domain
755566640RhoGEF domain
222223215SPRY domain
232333319RNA polymerase Rpb1, domain 2
12111219Guanylate kinase
545545533Gelsolin repeat
5698106751UBA/TS-N domain
11171715161718111PHD-finger
111115GGL domain
566666641HECT-domain (ubiquitin-transferase)
322121112Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
864655943Ribonuclease III domain
312213315Region in Clathrin and VPS
223233217RanBP1 domain
222122213PPIC-type PPIASE domain
312332317Zn-finger in Ran binding protein and others
159141113171998Zinc finger C-x8-C-x5-C-x3-H type (and similar)
212222314Poly(ADP-ribose) polymerase catalytic domain
111115Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
62645351534572400F-box domain
11111117Elongation factor 1 gamma, conserved domain
232212214Calpain family cysteine protease
322123316Copper fist DNA binding domain
778757849CRAL/TRIO domain
924273835BTB/POZ domain
113128Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
333333321Voltage gated chloride channel
233312216Caspase domain
6711945850GDSL-like Lipase/Acylhydrolase
11111117Poly-adenylate binding protein, unique domain
36322431162123183ABC transporter transmembrane region
161219Integrase core domain
696846645FAD binding domain
182517207812107Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11121129HAMP domain
222222214ribosomal L5P family C-terminus
776656643Insulinase (Peptidase family M16)
453534428Dehydrogenase E1 component
11111117Lumazine binding domain
765666642Elongation factor G C-terminus
456646536HMGL-like
444444428DnaJ central domain
12411312Starch binding domain
222222315Ribosomal protein L1p/L10e family
1091111761266Cation transporting ATPase, C-terminus
141013141081584Cation transporter/ATPase, N-terminus
321111211dUTPase
785747644Aconitase C-terminal domain
643233425Amino acid kinase family
12111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
30463635131325198Acyl transferase domain
1112229Urease beta subunit
688624741Dihydrodipicolinate synthetase family
48373741303040263haloacid dehalogenase-like hydrolase
547515734Glycosyl hydrolases family 2
15121917881190Glycosyl hydrolases family 18
1112117Proliferating cell nuclear antigen, N-terminal domain
112Translation initiation factor IF-3, C-terminal domain
11114Acylphosphatase
11111117Adenylosuccinate synthetase
222212213Asparaginase, N-terminal
333333321Peptidase S24-like
11211118Inorganic pyrophosphatase
7787451250Glycosyl hydrolases family 16
222313417Glycosyl hydrolases family 15
151710152121283NADH:flavin oxidoreductase / NADH oxidase family
6855256373-hydroxyacyl-CoA dehydrogenase, C-terminal domain
232331216Glycosyl hydrolase family 20, catalytic domain
444354428HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
3032252952524170GMC oxidoreductase
324423321Asparagine synthase
38642629Fungal cellulose binding domain
555555535Septin
11111117EF-1 guanine nucleotide exchange domain
11121118Homoserine dehydrogenase
43212315Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
433433323tRNA synthetases class I (E and Q), catalytic domain
11121118tRNA synthetases class I (R)
435544429XPG N-terminal domain
111517236131499Metallo-beta-lactamase superfamily
133310F5/8 type C domain
223222215Choline/Carnitine o-acyltransferase
112211210Putative esterase
11111117Ferrochelatase
222322215Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
12111118Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
433333322RNB domain
1013101129762Dioxygenase
322222215CNH domain
212112211Diacylglycerol kinase catalytic domain
747697848Dual specificity phosphatase, catalytic domain
44
122222213P21-Rho-binding domain
1811141312131495PX domain
122332215Ras association (RalGDS/AF-6) domain
645554534UBX domain
434344426VHS domain
11111117Phosphoinositide 3-kinase C2
322222215DAHP synthetase I family
141410125111278Carbon-nitrogen hydrolase
351212317N-acetyltransferase
12111118Prephenate dehydratase
233433321Syntaxin
655555536Pumilio-family RNA binding repeat
565466638Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
222222214ER lumen protein retaining receptor
222222214Glycoprotease family
222211111Histidinol dehydrogenase
444364429impB/mucB/samB family
11PPE family
11111117
11111117Ribosomal L15
2112118Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal L28 family
1111116Ribosomal L29 protein
111115Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
22331213Glycosyl hydrolase family 7
11Alanine racemase, C-terminal domain
11111117RNA pseudouridylate synthase
344344426Histone deacetylase domain
4441653642POT family
1111116PWWP domain
1111151012171793SET domain
8127859958Isochorismatase family
433212217Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
444555431XPG I-region
11111117Acetokinase family
2211118DNA photolyase
1113NlpC/P60 family
112Cation-independent mannose-6-phosphate receptor repeat
11114Nitroreductase family
9108124101669Sulfatase
21111176,7-dimethyl-8-ribityllumazine synthase
11111117Ribosomal protein S16
232121112Acyl CoA binding protein
43