PFAM Domains • Spinellus fusiger NRRL 22323 v1.0
Annotations/GenomesChlpad1Parpar1Phaart1Phybl2Radspe1Rhimi1_1Spifus1Zyghet1TotalAnnotation Description
PFAMs
13,39311,39112,3709,21610,7928,6269,37112,69287,851
117 transmembrane receptor (rhodopsin family)
3147 transmembrane receptor (Secretin family)
33234334257 transmembrane sweet-taste receptor of 3 GCPR
5442444842384250360ATPase family associated with various cellular activities (AAA)
5346534837342847346ABC transporter
1699125781379ATP synthase alpha/beta family, nucleotide-binding domain
22EGF-like domain
3019222117181921167Elongation factor Tu GTP binding domain
6244383538393352341Helix-loop-helix DNA-binding domain
23427422Hsp20/alpha crystallin family
2420151217101317128Hsp70 protein
1911131211131014103KH domain
112SH2 domain
4935363732483139307SH3 domain
1314121111111514101Actin
20911371245911154Ankyrin repeat
1210910109111384ADP-ribosylation factor family
2721283320202132202Eukaryotic aspartyl protease
9677775856Cyclic nucleotide-binding domain
3121121213Cytochrome c
211111119Double-stranded RNA binding motif
313353333182EF hand
1124Fe-4S binding domain
1111116Fibronectin type III domain
224Globin
88137311101070Glutathione S-transferase, C-terminal domain
4333332526Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
3123212825291627200Homeodomain
6565633539lactate/malate dehydrogenase, NAD binding domain
2017121614161416125Myosin head (motor domain)
42341235431357755451Cytochrome P450
2992342212202132102052531,855Protein kinase domain
1617171616151115123Pyridine nucleotide-disulphide oxidoreductase
6460565454515165455Ras family
2518281818171321158Response regulator receiver domain
212139RNase H
1119110497909694101784RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1315Reverse transcriptase (RNA-dependent DNA polymerase)
4352332224Copper/zinc superoxide dismutase (SODC)
111111129Iron/manganese superoxide dismutases, alpha-hairpin domain
2416252418151521158Subtilase family
4134492825222140260Sugar (and other) transporter
1615121314161115112Thioredoxin
6212231219Trypsin
108109883763Tubulin/FtsZ family, GTPase domain
11von Willebrand factor type A domain
37293720328872444489Zinc finger, C2H2 type
44755760613156Zinc finger, C3HC4 type (RING finger)
201710701223910171Zinc knuckle
8665557547Protein-tyrosine phosphatase
3334633330272640286short chain dehydrogenase
1919472311232137200Zinc-binding dehydrogenase
7895554851Thiolase, N-terminal domain
2322222217Beta-ketoacyl synthase, N-terminal domain
2141411142Fe-2S iron-sulfur cluster binding domain
1222221517Enolase, C-terminal TIM barrel domain
1191010898974Glutamine amidotransferase class-I
2111111512111415110TCP-1/cpn60 chaperonin family
7556353539Glutamine synthetase, catalytic domain
211111119Triosephosphate isomerase
4340322634263139271E1-E2 ATPase
191418201614148123Core histone H2A/H2B/H3/H4
11211118Alpha amylase, catalytic domain
1311117111161080Phorbol esters/diacylglycerol binding domain (C1 domain)
117658861162Bacterial transferase hexapeptide (six repeats)
6764646746tRNA synthetases class I (I, L, M and V)
1819131815201218133Cyclin, N-terminal domain
231314216Carboxylesterase family
5544544637DNA polymerase family B
4434443531ATP synthase subunit C
111111129Legume lectin domain
3422232422Peroxidase
114Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
151119Beta-lactamase
2134414120C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
3836343430332736268Calcineurin-like phosphoesterase
9474443742Cellulase (glycosyl hydrolase family 5)
7666666750tRNA synthetases class II (D, K and N)
6861545460524672467Mitochondrial carrier protein
2320212019181222155Aminotransferase class I and II
576116105656Phosphoribosyl transferase domain
1515121413161415114Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111129Phosphoglycerate kinase
4333433326Ribosomal protein S4/S9 N-terminal domain
6434444332Ribosomal protein S12/S23
2212111212Chaperonin 10 Kd subunit
2519202219201920164C2 domain
5835414839533130335PH domain
4031281930262339236bZIP transcription factor
2115281217121518138Aldehyde dehydrogenase family
7057594740522554404Fungal Zn(2)-Cys(6) binuclear cluster domain
4034373930372940286Cytochrome b5-like Heme/Steroid binding domain
1231111111Oxidoreductase molybdopterin binding domain
1314131311131515107Oxidoreductase NAD-binding domain
3024252027222227197SNF2 family N-terminal domain
4433434429Ribosomal protein S7p/S5e
2522202020221825172Ubiquitin-conjugating enzyme
97887751061Isocitrate/isopropylmalate dehydrogenase
5444544535Ribosomal Proteins L2, RNA binding domain
3444344531Hsp90 protein
4226322223Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
2222222115Dihydrofolate reductase
3331121124Cysteine-rich secretory protein family
4534533532Ribosomal protein S3, C-terminal domain
55445446372-oxoacid dehydrogenases acyltransferase (catalytic domain)
3432431424Catalase
3332322220Disintegrin
89514721147UDP-glucoronosyl and UDP-glucosyl transferase
7666855649Aminotransferase class-III
6434334431Ribosomal protein S19
111111118DNA gyrase B
4523332628Thiamine pyrophosphate enzyme, central domain
5454534535Lyase
4333332324Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
2222422218Ferritin-like domain
3212222216Adenylate and Guanylate cyclase catalytic domain
211111119ATP synthase delta (OSCP) subunit
111111118Orotidine 5'-phosphate decarboxylase / HUMPS family
111111129Indole-3-glycerol phosphate synthase
3333331221Pyruvate kinase, barrel domain
4029222030283330232Kinesin motor domain
4742323437373038297DnaJ domain
2014141414141416120Proteasome subunit
5222111620Major intrinsic protein
2212112213ATP synthase
107567658543'5'-cyclic nucleotide phosphodiesterase
1111121210Profilin
5435445636Ribosomal protein L22p/L17e
4333333224Ribosomal protein L14p/L23e
2117202320211535172Ubiquitin family
6764666647Cofilin/tropomyosin-type actin-binding protein
433334352814-3-3 protein
4353434632Alkaline phosphatase
2118302019181227165Aldo/keto reductase family
2319182024331826181Myb-like DNA-binding domain
13109109691076Forkhead domain
11Glycosyl hydrolases family 32 N-terminal domain
5441414427Ribosomal protein L16p/L10e
7334333430Ribosomal protein S14p/S29e
9456756749FKBP-type peptidyl-prolyl cis-trans isomerase
2212121213Glutathione peroxidase
347
79913911121282Flavodoxin
111211119Calreticulin family
78655551152Aminotransferase class-V
2311211314Ribonucleotide reductase, small chain
5952544754475560428DEAD/DEAH box helicase
9884867482778686673Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
5433434430Ribosomal protein L23
318111318Pyridoxal-dependent decarboxylase, C-terminal sheet domain
5325544533Ribosomal protein L5
6445432432Pyridoxal-dependent decarboxylase conserved domain
3222211316Citrate synthase, C-terminal domain
7666666649GHMP kinases N terminal domain
129911786971Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
1091099981377Pyridoxal-phosphate dependent enzyme
2120171617201823152NUDIX domain
7656565747pfkB family carbohydrate kinase
897630Glycosyl hydrolases family 28
3423333526Ribosomal protein L3
6435444535Ribosomal protein L11, RNA binding domain
1111811101081079Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
11Gamma-thionin family
1699125781278ATP synthase alpha/beta chain, C terminal domain
151014912121418104Calponin homology (CH) domain
112Bacterial dnaA protein
6556462741Glutamine amidotransferases class-II
4222332220Ribosomal protein S15
222211111'Cold-shock' DNA-binding domain
55145444546Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
2422232421Ribonucleotide reductase, all-alpha domain
4434434531Ribosomal protein S2
13997694966SRF-type transcription factor (DNA-binding and dimerisation domain)
5438363528393244306GATA zinc finger
10107197188887Amino acid permease
87667671057Prolyl oligopeptidase family
4555646439Ribosomal protein L30p/L7e
2352442426Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6655654845Aconitase family (aconitate hydratase)
4331232220Glycosyl hydrolases family 17
7335433432Ribosomal protein S5, N-terminal domain
8654552641Nucleoside diphosphate kinase
6675534642Tetraspanin family
4333333325Ribosomal protein S10p/S20e
4033252235202040235Arrestin (or S-antigen), N-terminal domain
112111119Phosphoglucose isomerase
2222210Carbohydrate phosphorylase
2222221215SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
5334333428Ribosomal protein L6
7564654744Polyprenyl synthetase
1210979871274Hexokinase
131098678869Dynamin family
111111118Biopterin-dependent aromatic amino acid hydroxylase
2222211113Transcription factor TFIID (or TATA-binding protein, TBP)
5445543434Rieske [2Fe-2S] domain
15131110111091493Biotin-requiring enzyme
3222222116Phosphofructokinase
3222322319Ribosomal protein S17
3321221418Hydroxymethylglutaryl-coenzyme A reductase
6646565644FGGY family of carbohydrate kinases, N-terminal domain
1211311313Sodium:dicarboxylate symporter family
1611191181251395Enoyl-CoA hydratase/isomerase
5434444432Ribosomal protein S9/S16
112PTS HPr component phosphorylation site
2323422422Transcription factor TFIIB repeat
7884565952Cytidine and deoxycytidylate deaminase zinc-binding region
211221110Molybdopterin oxidoreductase
12181722918913118Chromo (CHRromatin Organisation MOdifier) domain
1113Phosphatidylinositol-specific phospholipase C, X domain
6575452539D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
5554553537Malic enzyme, N-terminal domain
32222212166-phosphogluconate dehydrogenase, C-terminal domain
75115635850Multicopper oxidase
191213711131414103WW domain
3333334224Ribosomal RNA adenine dimethylase
1821641601621681571561801,329WD domain, G-beta repeat
112Calponin family repeat
3444534532Heavy-metal-associated domain
5655556643Adenylate kinase
4242323323Phosphoglucomutase/phosphomannomutase, C-terminal domain
6323333326Ribosomal protein S8
4223432323Ribosomal protein S11
1816141414151415120LIM domain
8564845646Regulator of chromosome condensation (RCC1) repeat
5432445431Ribosomal protein S13/S18
111115Tau and MAP protein, tubulin-binding repeat
1222222215chorismate binding enzyme
1486767976460s Acidic ribosomal protein
4444445433Prenyltransferase and squalene oxidase repeat
8107117106968Protein kinase C terminal domain
2121111110Single-strand binding protein family
11Type II/IV secretion system protein
21112119S-adenosylmethionine synthetase, N-terminal domain
1818161416181517132Bromodomain
1716201616171222136Acyl-CoA dehydrogenase, C-terminal domain
2320212120221721165Ubiquitin carboxyl-terminal hydrolase
21111118Ribosomal protein L36
4124133422Ribonuclease T2 family
3019211416141419147HSF-type DNA-binding
2322222217SRP54-type protein, GTPase domain
3212211214Urease alpha-subunit, N-terminal domain
10667643648Serine carboxypeptidase
14121010111291189Phosphatidylinositol 3- and 4-kinase
4242222220Transketolase, thiamine diphosphate binding domain
111111118WHEP-TRS domain
2222223217Inositol monophosphatase family
486512651056Glutaredoxin
3221221316Isocitrate lyase family
3222222217Serine hydroxymethyltransferase
111111219Iron-containing alcohol dehydrogenase
5432333326Ribosomal protein L10
139981266972KOW motif
111111118Ribosomal protein L34
11111117Ribosomal protein L33
3332333323RF-1 domain
11114Sodium:solute symporter family
111111219Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
2211112212IMP dehydrogenase / GMP reductase domain
3333321321Glucose-6-phosphate dehydrogenase, NAD binding domain
121071191181078Protein phosphatase 2C
76546651049Nucleotidyl transferase
3112211213Carbonic anhydrase
5221222218Phosphoribulokinase / Uridine kinase family
969166713975Fatty acid desaturase
6666765648MutS domain V
111111118Delta-aminolevulinic acid dehydratase
3263221625Arginase family
7666666649MCM P-loop domain
6444533635Squalene/phytoene synthase
2220201819151519148FHA domain
3234633631303636298AMP-binding enzyme
19121310128111297G-protein alpha subunit
2323202319192123171HMG (high mobility group) box
119208987981His Kinase A (phospho-acceptor) domain
797108861166Armadillo/beta-catenin-like repeat
3224193118371621198Tetratricopeptide repeat
7667647548Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
1461068125364BRCA1 C Terminus (BRCT) domain
67887761059Glycosyl transferases group 1
2225233221Glycosyl transferase family 2
2463473534SAM domain (Sterile alpha motif)
122212111linker histone H1 and H5 family
211111119Ribosomal protein L7/L12 C-terminal domain
3212211214Urease, gamma subunit
4453431327CoA-ligase
46118447852Phosphopantetheine attachment site
2222222216Formyl transferase
1515151413151315115Metallopeptidase family M24
1713103313271211136Leucine Rich Repeat
889237166683alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
179151011811990PB1 domain
1222222215Staphylococcal nuclease homologue
3731272929222535235Rab-GTPase-TBC domain
111111219Tudor domain
3321312217WH1 domain
6665756647Zinc finger, ZZ type
1111211210HRDC domain
2517151818151516139CBS domain
5335544534Ribosomal protein L13
4424434429Ribosomal protein L4/L1 family
111111118Clp protease
4443444330S1 RNA binding domain
111111118HIUase/Transthyretin family
6645454842AhpC/TSA family
4444444432tRNA synthetases class I (W and Y)
311111210UvrD/REP helicase N-terminal domain
1112138167121190Rhodanese-like domain
121491210981488Universal stress protein family
2226322724281431204Acetyltransferase (GNAT) family
2112111110SecE/Sec61-gamma subunits of protein translocation complex
111111129C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
8981191291076tRNA synthetase class II core domain (G, H, P, S and T)
3333332323SpoU rRNA Methylase family
3333322423Tetrapyrrole (Corrin/Porphyrin) Methylases
211111119Glycosyl transferase family, a/b domain
111115PDZ domain
2232222217Class II Aldolase and Adducin N-terminal domain
1212219Diacylglycerol kinase accessory domain
12109610871476Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
16121281210111495Fes/CIP4, and EFC/F-BAR homology domain
8678897659IQ calmodulin-binding motif
5333332325Phosphoinositide 3-kinase family, accessory domain (PIK domain)
9668674753Phospholipase D Active site motif
201513101471217108Regulator of G protein signaling domain
1210510910101177GTPase-activator protein for Ras-like GTPase
2519151820191718151RasGEF domain
1912101013111314102RasGEF N-terminal motif
4934332935312838277RhoGAP domain
4931372833272535265RhoGEF domain
13111010111171083SPRY domain
4333333527RNA polymerase Rpb1, domain 2
211111119Guanylate kinase
7778655752Gelsolin repeat
1413121514181013109UBA/TS-N domain
2524272623311731204PHD-finger
5333343428GGL domain
121099810101078HECT-domain (ubiquitin-transferase)
111112119Helix-hairpin-helix motif
11BRCA2 repeat
4352322324MSP (Major sperm protein) domain
1212331215Ribonuclease III domain
8662525539Region in Clathrin and VPS
2222222216RanBP1 domain
2212122113PPIC-type PPIASE domain
6554545539Zn-finger in Ran binding protein and others
1614151417211515127Zinc finger C-x8-C-x5-C-x3-H type (and similar)
21211119B-box zinc finger
11111117Poly(ADP-ribose) polymerase catalytic domain
211211210Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
1212702021076719408F-box domain
3222111315Elongation factor 1 gamma, conserved domain
111111129Calpain family cysteine protease
7457664746Copper fist DNA binding domain
1111889751170CRAL/TRIO domain
1712133118121916138BTB/POZ domain
108686137967Ricin-type beta-trefoil lectin domain
21111118Inhibitor of Apoptosis domain
2222222216Voltage gated chloride channel
3445343430Caspase domain
12121988971590GDSL-like Lipase/Acylhydrolase
8655556949Poly-adenylate binding protein, unique domain
2111117POLO box duplicated region
1720212414111121139ABC transporter transmembrane region
44Integrase core domain
778987111067FAD binding domain
111227Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
3233322220HAMP domain
5435544535ribosomal L5P family C-terminus
97998811970Insulinase (Peptidase family M16)
6574544641Dehydrogenase E1 component
111111118Lumazine binding domain
11687787761Elongation factor G C-terminus
7666546646HMGL-like
8556654746DnaJ central domain
11114Sulfotransferase domain
6543536537Ribosomal protein L1p/L10e family
1616161315121323124Cation transporting ATPase, C-terminus
2421201521161519151Cation transporter/ATPase, N-terminus
1111116dUTPase
6645654844Aconitase C-terminal domain
10667854551Amino acid kinase family
111111129N-(5'phosphoribosyl)anthranilate (PRA) isomerase
4322222320Acyl transferase domain
3212211214Urease beta subunit
132112111Dihydrodipicolinate synthetase family
2829204225362227229haloacid dehalogenase-like hydrolase
121310881191384Glycosyl hydrolases family 18
211111119Proliferating cell nuclear antigen, N-terminal domain
111111118Translation initiation factor IF-3, C-terminal domain
111121119Adenylosuccinate synthetase
111111118Asparaginase, N-terminal
3233443325Peptidase S24-like
4454343431Inorganic pyrophosphatase
145Subtilisin inhibitor-like
8764773749Glycosyl hydrolases family 16
6463435536Glycosyl hydrolases family 15
771817410366NADH:flavin oxidoreductase / NADH oxidase family
22221222153-hydroxyacyl-CoA dehydrogenase, C-terminal domain
6334344431Glycosyl hydrolase family 20, catalytic domain
3443444632HhH-GPD superfamily base excision DNA repair protein
111111118AIR carboxylase
6335332530GMC oxidoreductase
5742332834Asparagine synthase
121329Fungal cellulose binding domain
2015141615141516125Septin
2124222318EF-1 guanine nucleotide exchange domain
1211111210Homoserine dehydrogenase
435125424Flavin-binding monooxygenase-like
3333333324tRNA synthetases class I (E and Q), catalytic domain
4333332324tRNA synthetases class I (R)
5655646845XPG N-terminal domain
129101191371081Metallo-beta-lactamase superfamily
1211117F5/8 type C domain
7654367543Choline/Carnitine o-acyltransferase
111111118Putative esterase
3532431526Glycosyl hydrolase family 9
111111118Ferrochelatase
3323343526Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111111129Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
10898987968RNB domain
17131411109111398CNH domain
4534553534Diacylglycerol kinase catalytic domain
141512131491216105Dual specificity phosphatase, catalytic domain
3221221215MyTH4 domain
13111189991282P21-Rho-binding domain
4531312535263332258PX domain
12744866552Ras association (RalGDS/AF-6) domain
7