PFAM Domains • Suillus placidus S07 v1.0
Annotations/GenomesSuigr1Suilu4Suipla1Suiplac1Suisubl1Suivar1TotalAnnotation Description
PFAMs
8,0459,9669,9019,83011,73710,40559,884
445647435749296ATPase family associated with various cellular activities (AAA)
474450525953305ABC transporter
576614644ATP synthase alpha/beta family, nucleotide-binding domain
151518191918104Elongation factor Tu GTP binding domain
11111111121268Helix-loop-helix DNA-binding domain
611778847Hsp20/alpha crystallin family
112918162616116Hsp70 protein
88888747KH domain
11SH2 domain
251615161718107SH3 domain
11131111111471Actin
283334546Ankyrin repeat
8912813858ADP-ribosylation factor family
363540395751258Eukaryotic aspartyl protease
33333318Cyclic nucleotide-binding domain
111115Cytochrome c
109111010959Double-stranded RNA binding motif
171111122EF hand
114Fe-4S binding domain
112Fibronectin type III domain
232119182316120Glutathione S-transferase, C-terminal domain
1111228Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
14111112151376Homeodomain
26222216lactate/malate dehydrogenase, NAD binding domain
66989644Myosin head (motor domain)
112119131129267197955Cytochrome P450
1942142382213202611,448Protein kinase domain
19121212121481Pyridine nucleotide-disulphide oxidoreductase
262833303626179Ras family
667611945Response regulator receiver domain
1629743867RNase H
676165656860386RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Reverse transcriptase (RNA-dependent DNA polymerase)
1111116Copper/zinc superoxide dismutase (SODC)
23353218Iron/manganese superoxide dismutases, alpha-hairpin domain
24446525Subtilase family
343739414840239Sugar (and other) transporter
1111111191265Thioredoxin
655511537Tubulin/FtsZ family, GTPase domain
617von Willebrand factor type A domain
743330363831242Zinc finger, C2H2 type
638108106105Zinc finger, C3HC4 type (RING finger)
1313101191268Zinc knuckle
22223213Protein-tyrosine phosphatase
615148498874371short chain dehydrogenase
272829283930181Zinc-binding dehydrogenase
56776637Thiolase, N-terminal domain
44553223Beta-ketoacyl synthase, N-terminal domain
31111182Fe-2S iron-sulfur cluster binding domain
1111116Enolase, C-terminal TIM barrel domain
8109810853Glutamine amidotransferase class-I
11131212181278TCP-1/cpn60 chaperonin family
34334421Glutamine synthetase, catalytic domain
1111116Triosephosphate isomerase
162020212218117E1-E2 ATPase
222222222721136Core histone H2A/H2B/H3/H4
77655939Alpha amylase, catalytic domain
64445528Phorbol esters/diacylglycerol binding domain (C1 domain)
33333419Bacterial transferase hexapeptide (six repeats)
57786639tRNA synthetases class I (I, L, M and V)
1110910151570Cyclin, N-terminal domain
889913855Carboxylesterase family
54554528DNA polymerase family B
34333319ATP synthase subunit C
1111116Peroxidase
11116111Beta-lactamase
54444930C-5 cytosine-specific DNA methylase
282627262924160Calcineurin-like phosphoesterase
8161313241690Cellulase (glycosyl hydrolase family 5)
55659535tRNA synthetases class II (D, K and N)
413737403840233Mitochondrial carrier protein
1111116recA bacterial DNA recombination protein
181718181921111Aminotransferase class I and II
75555431Phosphoribosyl transferase domain
11Sigma-54 interaction domain
13131513131784Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
32342216Ribosomal protein S4/S9 N-terminal domain
32332215Ribosomal protein S12/S23
1111116Chaperonin 10 Kd subunit
11111111111166C2 domain
177666850PH domain
68778743bZIP transcription factor
161717173724128Aldehyde dehydrogenase family
565349485550311Fungal Zn(2)-Cys(6) binuclear cluster domain
232422222423138Cytochrome b5-like Heme/Steroid binding domain
33223215Oxidoreductase molybdopterin binding domain
888881151Oxidoreductase NAD-binding domain
303641314335216SNF2 family N-terminal domain
24223316Ribosomal protein S7p/S5e
192121202521127Ubiquitin-conjugating enzyme
55555732Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
22226216Hsp90 protein
22223213Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
1111116Ribosomal protein S3, C-terminal domain
2111319Cupin
544454262-oxoacid dehydrogenases acyltransferase (catalytic domain)
33343319Catalase
112UDP-glucoronosyl and UDP-glucosyl transferase
65559535Aminotransferase class-III
22222212Ribosomal protein S19
1111116DNA gyrase B
33433420Thiamine pyrophosphate enzyme, central domain
55555631Lyase
22232213Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
22223213Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
1111116Aromatic amino acid lyase
1111318Pyruvate kinase, barrel domain
9910910956Kinesin motor domain
333033333533197DnaJ domain
14141615151488Proteasome subunit
45445527Major intrinsic protein
1111116ATP synthase
32312112Glycosyl hydrolase family 1
11112173'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
22432215Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
161619202312106Ubiquitin family
55655531Cofilin/tropomyosin-type actin-binding protein
2432221514-3-3 protein
394444425945273Aldo/keto reductase family
147878751Myb-like DNA-binding domain
65665533Forkhead domain
12432214Ribosomal protein L16p/L10e
22222212Ribosomal protein S14p/S29e
33333318FKBP-type peptidyl-prolyl cis-trans isomerase
2111229Glutathione peroxidase
11
54445830Flavodoxin
3111118Calreticulin family
21113513Common central domain of tyrosinase
791213111062Aminotransferase class-V
358726453Ribonucleotide reductase, small chain
56777610910467489DEAD/DEAH box helicase
9610310613113093659Helicase conserved C-terminal domain
1124Fructose-bisphosphate aldolase class-I
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
23222213Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111116Ribosomal protein L5
44449631Pyridoxal-dependent decarboxylase conserved domain
34447426Citrate synthase, C-terminal domain
55555530GHMP kinases N terminal domain
66667738Biotin carboxylase, N-terminal domain
1111127Tryptophan synthase alpha chain
888812953Pyridoxal-phosphate dependent enzyme
112'Paired box' domain
13121415141583NUDIX domain
33333318pfkB family carbohydrate kinase
23224518Glycosyl hydrolases family 28
22222212Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
89899952Histidine phosphatase superfamily (branch 1)
31222313Thymidylate synthase
55656532ATP synthase alpha/beta chain, C terminal domain
45756431Calponin homology (CH) domain
63334322Glutamine amidotransferases class-II
32222112Ribosomal protein S15
121419Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
22222212SRF-type transcription factor (DNA-binding and dimerisation domain)
11101010271684GATA zinc finger
26141011131387Amino acid permease
911810151063Prolyl oligopeptidase family
12222211Ribosomal protein L30p/L7e
12101010152077Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
54565530Aconitase family (aconitate hydratase)
1113Glycosyl hydrolases family 17
22222212Ribosomal protein S5, N-terminal domain
12224112Nucleoside diphosphate kinase
1111329Tetraspanin family
22222212Ribosomal protein S10p/S20e
44333320Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
21221311Carbohydrate phosphorylase
11331110SecY translocase
11331110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
77779845Polyprenyl synthetase
32222213Hexokinase
7101110161367Dynamin family
11231210Transcription factor TFIID (or TATA-binding protein, TBP)
11RTX calcium-binding nonapeptide repeat (4 copies)
32222213Rieske [2Fe-2S] domain
99989852Biotin-requiring enzyme
1111116Phosphofructokinase
22222212Ribosomal protein S17
2111218Hydroxymethylglutaryl-coenzyme A reductase
43445323FGGY family of carbohydrate kinases, N-terminal domain
787681147Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
22222212Transcription factor TFIIB repeat
77687742Cytidine and deoxycytidylate deaminase zinc-binding region
1111217Molybdopterin oxidoreductase
10107910753Chromo (CHRromatin Organisation MOdifier) domain
22222212Phosphatidylinositol-specific phospholipase C, Y domain
34334320Phosphatidylinositol-specific phospholipase C, X domain
65665937D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
34333622Malic enzyme, N-terminal domain
11111166-phosphogluconate dehydrogenase, C-terminal domain
182123192827136Multicopper oxidase
2899911975WW domain
25333218Ribosomal RNA adenine dimethylase
4862941781662101991,533WD domain, G-beta repeat
44554426Heavy-metal-associated domain
33433319Adenylate kinase
22222212Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222111Ribosomal protein S8
22222212Ribosomal protein S11
66666636LIM domain
34435322Regulator of chromosome condensation (RCC1) repeat
22223213Ribosomal protein S13/S18
11REV protein (anti-repression trans-activator protein)
23222213chorismate binding enzyme
2233331660s Acidic ribosomal protein
44664630Prenyltransferase and squalene oxidase repeat
65555531Protein kinase C terminal domain
1111116Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
12111612111173Bromodomain
77678944Acyl-CoA dehydrogenase, C-terminal domain
16151616181596Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
32333317Ribonuclease T2 family
49444429HSF-type DNA-binding
24222214SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
8101110191270Serine carboxypeptidase
98988951Phosphatidylinositol 3- and 4-kinase
25224217Transketolase, thiamine diphosphate binding domain
1111116WHEP-TRS domain
22222212Inositol monophosphatase family
64555429Glutaredoxin
32222213Isocitrate lyase family
1111116Serine hydroxymethyltransferase
22223213Iron-containing alcohol dehydrogenase
22222212Ribosomal protein L10
58565534KOW motif
1111217Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
111115Ribosomal protein L33
33343319RF-1 domain
54553527Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
1111228DNA polymerase family A
21232313IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
9999111057Protein phosphatase 2C
33333318Nucleotidyl transferase
44443423Carbonic anhydrase
122218Phosphoribulokinase / Uridine kinase family
66677638Fatty acid desaturase
667610843MutS domain V
1111116Delta-aminolevulinic acid dehydratase
45555832Arginase family
66686638MCM P-loop domain
12122311Squalene/phytoene synthase
11114Bacterial extracellular solute-binding proteins, family 3
12141213101374FHA domain
303334334636212AMP-binding enzyme
11101514141175G-protein alpha subunit
161816161519100HMG (high mobility group) box
23423216His Kinase A (phospho-acceptor) domain
33224216Armadillo/beta-catenin-like repeat
321717191417116Tetratricopeptide repeat
43333420Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
112Binding-protein-dependent transport system inner membrane component
109786747BRCA1 C Terminus (BRCT) domain
75774838Glycosyl transferases group 1
43225521Glycosyl transferase family 2
1111116SAM domain (Sterile alpha motif)
44444424linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
1111116Urease, gamma subunit
43333319CoA-ligase
10131416171383Phosphopantetheine attachment site
22222212Formyl transferase
911111011961Metallopeptidase family M24
175224535Leucine Rich Repeat
297887968alpha/beta hydrolase fold
33333217RNA polymerase Rpb2, domain 6
55554529PB1 domain
22222212Staphylococcal nuclease homologue
9121212121269Rab-GTPase-TBC domain
1111116Tudor domain
22223213WH1 domain
33332216Zinc finger, ZZ type
1111116HRDC domain
106666842CBS domain
22223213Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
44444424S1 RNA binding domain
1111116HIUase/Transthyretin family
44544425AhpC/TSA family
44554325tRNA synthetases class I (W and Y)
23136520UvrD/REP helicase N-terminal domain
3888101148Rhodanese-like domain
22223213Universal stress protein family
271515141817106Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
75575534tRNA synthetase class II core domain (G, H, P, S and T)
24222214Tetrapyrrole (Corrin/Porphyrin) Methylases
23221414Glycosyl transferase family, a/b domain
33544524Class II Aldolase and Adducin N-terminal domain
34444423Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55555530Fes/CIP4, and EFC/F-BAR homology domain
42324217IQ calmodulin-binding motif
42227219Phosphoinositide 3-kinase family, accessory domain (PIK domain)
32223214Phospholipase D Active site motif
13333316Regulator of G protein signaling domain
44444323GTPase-activator protein for Ras-like GTPase
517998856RasGEF domain
713777647RasGEF N-terminal motif
13121212121374RhoGAP domain
17191716151599RhoGEF domain
44444424SPRY domain
43663426RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
45334423Gelsolin repeat
87997646UBA/TS-N domain
18151513131791PHD-finger
12222211GGL domain
65776839HECT-domain (ubiquitin-transferase)
1111116Helix-hairpin-helix motif
1111116MSP (Major sperm protein) domain
83333323Ribonuclease III domain
2611912545Region in Clathrin and VPS
23333317RanBP1 domain
22222212PPIC-type PPIASE domain
31329Zn-finger in Ran binding protein and others
24121111121383Zinc finger C-x8-C-x5-C-x3-H type (and similar)
111216B-box zinc finger
44444424Poly(ADP-ribose) polymerase catalytic domain
21222211Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
842731293243246F-box domain
1211218Elongation factor 1 gamma, conserved domain
1111116Calpain family cysteine protease
22222212Copper fist DNA binding domain
891199955CRAL/TRIO domain
172731333628172BTB/POZ domain
32229Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
22222212Voltage gated chloride channel
887711950Caspase domain
53433321GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
151517162618107ABC transporter transmembrane region
33333823FAD binding domain
1111116Condensation domain
1211117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1121229HAMP domain
22222212ribosomal L5P family C-terminus
55554529Insulinase (Peptidase family M16)
55558634Dehydrogenase E1 component
1111116Lumazine binding domain
67667840Elongation factor G C-terminus
44555528HMGL-like
44445324DnaJ central domain
1111116Starch binding domain
33333318Ribosomal protein L1p/L10e family
61391012858Cation transporting ATPase, C-terminus
7791012752Cation transporter/ATPase, N-terminus
1111116dUTPase
54445931Aconitase C-terminal domain
33333419Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
54674329Acyl transferase domain
1111116Urease beta subunit
22222212Dihydrodipicolinate synthetase family
341317181915116haloacid dehalogenase-like hydrolase
1111116Glycosyl hydrolases family 2
1099119856Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
122117Translation initiation factor IF-3, C-terminal domain
1111127Adenylosuccinate synthetase
1111116Asparaginase, N-terminal
22445320Peptidase S24-like
1111116Inorganic pyrophosphatase
391011101255Glycosyl hydrolases family 16
22222212Glycosyl hydrolases family 15
818108131168NADH:flavin oxidoreductase / NADH oxidase family
12113193-hydroxyacyl-CoA dehydrogenase, C-terminal domain
22223516Glycosyl hydrolase family 20, catalytic domain
44556529HhH-GPD superfamily base excision DNA repair protein
1111116AIR carboxylase
12161212242298GMC oxidoreductase
22222212Asparagine synthase
76669640Septin
1111116EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
32332417Flavin-binding monooxygenase-like
33343319tRNA synthetases class I (E and Q), catalytic domain
121217tRNA synthetases class I (R)
675712946XPG N-terminal domain
77569741Metallo-beta-lactamase superfamily
11114F5/8 type C domain
68657537Choline/Carnitine o-acyltransferase
1111116Putative esterase
1111116Glycosyl hydrolase family 9
1111149Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11113310Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33335320RNB domain
1111127Dioxygenase
36766533CNH domain
22223213Diacylglycerol kinase catalytic domain
11131413131680Dual specificity phosphatase, catalytic domain
2111128MyTH4 domain
33334420P21-Rho-binding domain
13141414141584PX domain
34335422Ras association (RalGDS/AF-6) domain
44434625UBX domain
57557433VHS domain
2111117Phosphoinositide 3-kinase C2
22222212DAHP synthetase I family
44446426Carbon-nitrogen hydrolase
2316Geminivirus Rep catalytic domain
2122119Prephenate dehydratase
54444425Syntaxin
54445426Pumilio-family RNA binding repeat
57888642Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
1111217ER lumen protein retaining receptor
22223213tRNA N6-adenosine threonylcarbamoyltransferase
1111116Histidinol dehydrogenase
33333318impB/mucB/samB family
22
1111116Ribosomal L15
13333316Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
1121117Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1111116Ribosomal S17
1111127Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
22232213RNA pseudouridylate synthase
66666838Histone deacetylase domain
222118POT family
22212211PWWP domain
12151314151281SET domain
46655632Isochorismatase family
22223213Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
101916173712111XPG I-region
1111116Acetokinase family
1111116DNA photolyase
1111116Cation-independent mannose-6-phosphate receptor repeat
2211219Cytosol aminopeptidase family, catalytic domain
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
23333418Acyl CoA binding protein
55668535Cullin family
1111116Elongation factor TS
85446431FAD binding domain
861211202784O-methyltransferase domain
37779841EamA-like transporter family
22
8128108955ThiF family
1211117Ribosomal family S4e
1111116Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
11T-box
33444321Ammonium Transporter Family
33235622Sulfate permease family
1111217MATH domain
22222212Dehydratase family
33333318Transaldolase/Fructose-6-phosphate aldolase
22222212Mechanosensitive ion channel
12222211GTP cyclohydrolase II
222221113,4-dihydroxy-2-butanone 4-phosphate synthase
44544425Adaptor complexes medium subunit family
77766740Exonuclease
2112129Dipeptidyl peptidase IV (DPP IV) N-terminal region
464216NB-ARC domain
710888647Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
111115Sodium:sulfate symporter transmembrane region
1111127DNA-dependent RNA polymerase
1111116Glycosyl transferase family 4
1111116HCO3- transporter family
22232314Nucleosome assembly protein (NAP)
44444424Synaptobrevin
11223211GMP synthase C terminal domain
68666739Adenosine/AMP deaminase
45444425Oxidoreductase FAD-binding domain
68101111652Thioesterase domain
22222212Histidine biosynthesis protein
34556427Glycosyltransferase family 20
1111116UDP-glucose/GDP-mannose dehydrogenase family, central domain
24223316Carbamoyl-phosphate synthase small chain, CPSase domain
12222211PAS fold
33363321Probable molybdopterin binding domain
45444425Sec1 family
22222313GDP dissociation inhibitor
91091110857Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
44446527Initiation factor 2 subunit family
22PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
16111111Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
1111116GTP1/OBG
22222212Gamma-glutamyltranspeptidase
111115Ribosomal L40e family
1111116GrpE
33333318TatD related DNase
12332213Inhibitor of apoptosis-promoting Bax1
1111116Eukaryotic DNA topoisomerase I, catalytic core
588713950Dynamin central region
12212196-O-methylguanine DNA methyltransferase, DNA binding domain
22642218Carboxyl transferase domain
161918213628138UbiA prenyltransferase family
44455426Endoribonuclease L-PSP
13333316Phosphorylase superfamily
11Mannose-6-phosphate isomerase
895515951Cys/Met metabolism PLP-dependent enzyme
43335422Glycosyl hydrolases family 31
1111116NADH ubiquinone oxidoreductase, 20 Kd subunit
106109121461ABC-2 type transporter
4453319Bestrophin, RFP-TM, chloride channel
33445524Amino-transferase class IV
44443423CDP-alcohol phosphatidyltransferase
1221118Calpain large subunit, domain III
44444323ATP dependent DNA ligase domain
55555530FMN-dependent dehydrogenase
1111116Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
223222133-beta hydroxysteroid dehydrogenase/isomerase family
1211117Glycosyl hydrolases family 38 N-terminal domain
22222212Nitrite and sulphite reductase 4Fe-4S domain
1111116Ribosomal protein S18
1111116Clathrin light chain
1111116Galactose-1-phosphate uridyl transferase, N-terminal domain
22222212Ubiquitin carboxyl-terminal hydrolase, family 1
31111