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PFAM Domains • Psilocybe cubensis v1.0
Annotations/GenomesAgrped1Galma1Gymch1Gymjun1Hebcy2Phoaln1Psicub1_1TotalAnnotation Description
PFAMs
8,7259,4978,85610,0917,67511,37710,27366,494
39485245454238309ATPase family associated with various cellular activities (AAA)
64686155447961432ABC transporter
444448432ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
15151516181816113Elongation factor Tu GTP binding domain
1211111012131079Helix-loop-helix DNA-binding domain
12815137121380Hsp20/alpha crystallin family
813131412151085Hsp70 protein
9888771764KH domain
11114SH2 domain
29292615282018165SH3 domain
1211101111121380Actin
317438931713203Ankyrin repeat
79888101060ADP-ribosylation factor family
23282729151926167Eukaryotic aspartyl protease
333433322Cyclic nucleotide-binding domain
11Beta/Gamma crystallin
123Cytochrome b(C-terminal)/b6/petD
22Cytochrome b/b6/petB
12111118Cytochrome c
766484540Double-stranded RNA binding motif
2117191192180EF hand
111144Fe-4S binding domain
11114Fibronectin type III domain
121414956868Glutathione S-transferase, C-terminal domain
221221313Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
44Hemopexin
9898911963Homeodomain
11Laminin EGF domain
222223215lactate/malate dehydrogenase, NAD binding domain
554656435Myosin head (motor domain)
170174173141891781761,101Cytochrome P450
1671921872302062442541,480Protein kinase domain
22202114171214120Pyridine nucleotide-disulphide oxidoreductase
31352834292834219Ras family
8889710858Response regulator receiver domain
12109956455RNase H
69697056657257458RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
132116Reverse transcriptase (RNA-dependent DNA polymerase)
11112118Copper/zinc superoxide dismutase (SODC)
232322216Iron/manganese superoxide dismutases, alpha-hairpin domain
816101512151995Subtilase family
32393841225038260Sugar (and other) transporter
91310101091172Thioredoxin
556598644Tubulin/FtsZ family, GTPase domain
475521von Willebrand factor type A domain
69605422582820311Zinc finger, C2H2 type
67747135669286Zinc finger, C3HC4 type (RING finger)
2739141020811129Zinc knuckle
232426322Protein-tyrosine phosphatase
938093924810575586short chain dehydrogenase
57354640253538276Zinc-binding dehydrogenase
4445510537Thiolase, N-terminal domain
889546444Beta-ketoacyl synthase, N-terminal domain
3331311152Fe-2S iron-sulfur cluster binding domain
212112211Enolase, C-terminal TIM barrel domain
1146Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
887978855Glutamine amidotransferase class-I
1010111311141382TCP-1/cpn60 chaperonin family
112ATP synthase A chain
334443425Glutamine synthetase, catalytic domain
12111118Triosephosphate isomerase
12141216142017105E1-E2 ATPase
18151817162014118Core histone H2A/H2B/H3/H4
13116Copper binding proteins, plastocyanin/azurin family
787688650Alpha amylase, catalytic domain
666445435Phorbol esters/diacylglycerol binding domain (C1 domain)
632453427Bacterial transferase hexapeptide (six repeats)
353435831tRNA synthetases class I (I, L, M and V)
1115141211191193Cyclin, N-terminal domain
51342824163444231Carboxylesterase family
444449433DNA polymerase family B
333233421ATP synthase subunit C
1534231781712126Peroxidase
114Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
12121415781078Beta-lactamase
445344428C-5 cytosine-specific DNA methylase
123NADH dehydrogenase
27303022312324187Calcineurin-like phosphoesterase
13222031102925150Cellulase (glycosyl hydrolase family 5)
575565538tRNA synthetases class II (D, K and N)
39414038374141277Mitochondrial carrier protein
112recA bacterial DNA recombination protein
15161316141313100Aminotransferase class I and II
787463641Phosphoribosyl transferase domain
1212121212171188Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
11112118Chaperonin 10 Kd subunit
21271614171413122C2 domain
22242051677101PH domain
4548610845bZIP transcription factor
18181614121818114Aldehyde dehydrogenase family
69636442665346403Fungal Zn(2)-Cys(6) binuclear cluster domain
23272421242322164Cytochrome b5-like Heme/Steroid binding domain
232242318Oxidoreductase molybdopterin binding domain
699888957Oxidoreductase NAD-binding domain
25293226273223194SNF2 family N-terminal domain
232222215Ribosomal protein S7p/S5e
22232224233022166Ubiquitin-conjugating enzyme
666656641Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
239322223Hsp90 protein
333223319Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
1111217Chitin recognition protein
342252422Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
212212212Cupin
111115Annexin
3333333212-oxoacid dehydrogenases acyltransferase (catalytic domain)
559324432Catalase
11111117Disintegrin
1210116661869UDP-glucoronosyl and UDP-glucosyl transferase
6105556643Aminotransferase class-III
232224217Ribosomal protein S19
1111116DNA gyrase B
345533528Thiamine pyrophosphate enzyme, central domain
445434428Lyase
222222214Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112122110Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
11111218Indole-3-glycerol phosphate synthase
253642224Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
9889911862Kinesin motor domain
36383430323633239DnaJ domain
14141414141614100Proteasome subunit
876666847Major intrinsic protein
21111118ATP synthase
353333424Glycosyl hydrolase family 1
111211183'5'-cyclic nucleotide phosphodiesterase
11111117Profilin
112222212Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
17202015161613117Ubiquitin family
565555536Cofilin/tropomyosin-type actin-binding protein
11161121314-3-3 protein
33221112Alkaline phosphatase
11111117Zinc carboxypeptidase
63474241254943310Aldo/keto reductase family
1513137128775Myb-like DNA-binding domain
116106451557Forkhead domain
1113Glycosyl hydrolases family 32 N-terminal domain
111212210Ribosomal protein L16p/L10e
222222214Ribosomal protein S14p/S29e
349434431FKBP-type peptidyl-prolyl cis-trans isomerase
22111119Glutathione peroxidase
2215
666253432Flavodoxin
11111218Calreticulin family
10495391454Common central domain of tyrosinase
107997101163Aminotransferase class-V
2416222634Ribonucleotide reductase, small chain
55495964528350412DEAD/DEAH box helicase
8788101849110575631Helicase conserved C-terminal domain
11121118Fructose-bisphosphate aldolase class-I
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222223215Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11112118Ribosomal protein L5
547556739Pyridoxal-dependent decarboxylase conserved domain
344536429Citrate synthase, C-terminal domain
555566537GHMP kinases N terminal domain
777767748Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
777779751Pyridoxal-phosphate dependent enzyme
11'Paired box' domain
18181818182219131NUDIX domain
444566534pfkB family carbohydrate kinase
7176525547Glycosyl hydrolases family 28
223222215Ribosomal protein L3
222122213Ribosomal protein L11, RNA binding domain
8111110913870Histidine phosphatase superfamily (branch 1)
11121118Thymidylate synthase
13127Lipoxygenase
444448432ATP synthase alpha/beta chain, C terminal domain
443444427Calponin homology (CH) domain
679352234Glutamine amidotransferases class-II
222222214Ribosomal protein S15
225233219Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
1312311122Ribonucleotide reductase, all-alpha domain
222222214Ribosomal protein S2
364423325SRF-type transcription factor (DNA-binding and dimerisation domain)
101211119111074GATA zinc finger
26312510181211133Amino acid permease
11989612661Prolyl oligopeptidase family
111113210Ribosomal protein L30p/L7e
9910977960Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
646545535Aconitase family (aconitate hydratase)
895515538Glycosyl hydrolase family 10
544334629Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
222221213Nucleoside diphosphate kinase
544527532Tetraspanin family
112Galactoside-binding lectin
222223215Ribosomal protein S10p/S20e
593162430Arrestin (or S-antigen), N-terminal domain
621311115Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
211115112SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
599754544Polyprenyl synthetase
243243220Hexokinase
7778791055Dynamin family
11212119Transcription factor TFIID (or TATA-binding protein, TBP)
454343326Rieske [2Fe-2S] domain
112Phytochrome region
336Proton-conducting membrane transporter
101010999966Biotin-requiring enzyme
11111117Phosphofructokinase
222222214Ribosomal protein S17
11111139Hydroxymethylglutaryl-coenzyme A reductase
433333322FGGY family of carbohydrate kinases, N-terminal domain
910998141069Enoyl-CoA hydratase/isomerase
222222214Ribosomal protein S9/S16
233234219Transcription factor TFIIB repeat
667776645Cytidine and deoxycytidylate deaminase zinc-binding region
11121118Molybdopterin oxidoreductase
141211979870Chromo (CHRromatin Organisation MOdifier) domain
334434324Phosphatidylinositol-specific phospholipase C, Y domain
334535427Phosphatidylinositol-specific phospholipase C, X domain
767867647D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
434443325Malic enzyme, N-terminal domain
111111176-phosphogluconate dehydrogenase, C-terminal domain
139663121968Multicopper oxidase
8910810111268WW domain
232222215Ribosomal RNA adenine dimethylase
1851662071421421431351,120WD domain, G-beta repeat
343335324Heavy-metal-associated domain
333434323Adenylate kinase
112312212Phosphoglucomutase/phosphomannomutase, C-terminal domain
111512213Ribosomal protein S8
222223215Ribosomal protein S11
777677647LIM domain
134Matrixin
322436424Regulator of chromosome condensation (RCC1) repeat
223222215Ribosomal protein S13/S18
112NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
222322215chorismate binding enzyme
35323232160s Acidic ribosomal protein
444466331Prenyltransferase and squalene oxidase repeat
776355437Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
101011101081069Bromodomain
999999963Acyl-CoA dehydrogenase, C-terminal domain
14191817141515112Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
223233217Ribonuclease T2 family
11Gonadotropin-releasing hormone
4164666446HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
11111218Urease alpha-subunit, N-terminal domain
1514131610141395Serine carboxypeptidase
11Scorpion short toxin, BmKK2
898898858Phosphatidylinositol 3- and 4-kinase
222232215Transketolase, thiamine diphosphate binding domain
38221319Glycosyl hydrolases family 11
1111116WHEP-TRS domain
222222214Inositol monophosphatase family
444554430Glutaredoxin
654243226Isocitrate lyase family
11111117Serine hydroxymethyltransferase
222222214Iron-containing alcohol dehydrogenase
222222214Ribosomal protein L10
6854510543KOW motif
11111117Ribosomal protein L34
1113Ribosomal protein L33
323324320RF-1 domain
132213315Sodium:solute symporter family
111115Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
81410101018878Protein phosphatase 2C
323333320Nucleotidyl transferase
6611877550Carbonic anhydrase
11111117Phosphoribulokinase / Uridine kinase family
1514141311141192Fatty acid desaturase
666666642MutS domain V
11111117Delta-aminolevulinic acid dehydratase
345352325Arginase family
6767612751MCM P-loop domain
112312212Squalene/phytoene synthase
15138118111379FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
45343433254543259AMP-binding enzyme
18241924172416142G-protein alpha subunit
35203223131820161HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1113Cytochrome c oxidase subunit III
554445431His Kinase A (phospho-acceptor) domain
444332323Armadillo/beta-catenin-like repeat
39383416381618199Tetratricopeptide repeat
443335224Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
1210107116561BRCA1 C Terminus (BRCT) domain
677567442Glycosyl transferases group 1
574364332Glycosyl transferase family 2
331242419SAM domain (Sterile alpha motif)
442343121linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
123Pectate lyase
12216ribonuclease
11111117Urease, gamma subunit
335434325CoA-ligase
101076813963Phosphopantetheine attachment site
222222214Formyl transferase
1099119111170Metallopeptidase family M24
1516172133167Leucine Rich Repeat
4844499311614211alpha/beta hydrolase fold
533334324RNA polymerase Rpb2, domain 6
555555535PB1 domain
222222214Staphylococcal nuclease homologue
1111111210141281Rab-GTPase-TBC domain
11111117Tudor domain
222313215WH1 domain
354534428Zinc finger, ZZ type
11111117HRDC domain
1110117108865CBS domain
222222214Ribosomal protein L13
222222315Ribosomal protein L4/L1 family
11111117Clp protease
335555531S1 RNA binding domain
1111116HIUase/Transthyretin family
454444429AhpC/TSA family
454444429tRNA synthetases class I (W and Y)
111313212UvrD/REP helicase N-terminal domain
5541048844Rhodanese-like domain
221223113Universal stress protein family
44404118311822214Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222322215AIR synthase related protein, N-terminal domain
666568542tRNA synthetase class II core domain (G, H, P, S and T)
22Phage integrase family
222322215Tetrapyrrole (Corrin/Porphyrin) Methylases
112214112Glycosyl transferase family, a/b domain
333324321Class II Aldolase and Adducin N-terminal domain
444443427Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
767686848Fes/CIP4, and EFC/F-BAR homology domain
4113242228IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
444132119Phospholipase D Active site motif
111414315Regulator of G protein signaling domain
444443427GTPase-activator protein for Ras-like GTPase
71075991259RasGEF domain
71074871053RasGEF N-terminal motif
1314141315151397RhoGAP domain
14171417131518108RhoGEF domain
444444428SPRY domain
332433321RNA polymerase Rpb1, domain 2
12111219Guanylate kinase
544443529Gelsolin repeat
9109897456UBA/TS-N domain
17211820251816135PHD-finger
111212210GGL domain
6186668858HECT-domain (ubiquitin-transferase)
1121117Helix-hairpin-helix motif
12111118MSP (Major sperm protein) domain
966596344Ribonuclease III domain
267328533Region in Clathrin and VPS
454544329RanBP1 domain
222122112PPIC-type PPIASE domain
333132116Zn-finger in Ran binding protein and others
31272312251510143Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11111139B-box zinc finger
665677542Poly(ADP-ribose) polymerase catalytic domain
222112111Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
1612942553020643261,015F-box domain
11111117Elongation factor 1 gamma, conserved domain
364354530Calpain family cysteine protease
222332216Copper fist DNA binding domain
778967751CRAL/TRIO domain
17501326204326195BTB/POZ domain
111616141117489Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
333433322Voltage gated chloride channel
13422723163915175Caspase domain
12187457760GDSL-like Lipase/Acylhydrolase
221222213Poly-adenylate binding protein, unique domain
11111218POLO box duplicated region
112NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
32383731194432233ABC transporter transmembrane region
12113Integrase core domain
333333321FAD binding domain
23212111Condensation domain
12111219S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111218HAMP domain
222223215ribosomal L5P family C-terminus
555556536Insulinase (Peptidase family M16)
444544429Dehydrogenase E1 component
11111117Lumazine binding domain
777698751Elongation factor G C-terminus
444547432HMGL-like
444444428DnaJ central domain
533243727Starch binding domain
223335321Ribosomal protein L1p/L10e family
6866811752Cation transporting ATPase, C-terminus
89861012861Cation transporter/ATPase, N-terminus
11111117dUTPase
665545435Aconitase C-terminal domain
333335323Amino acid kinase family
11111218N-(5'phosphoribosyl)anthranilate (PRA) isomerase
8710558447Acyl transferase domain
11111117Urease beta subunit
222222214Dihydrodipicolinate synthetase family
30323314291714169haloacid dehalogenase-like hydrolase
222212213Glycosyl hydrolases family 2
1216141111141896Glycosyl hydrolases family 18
11121219Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
11111117Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
343242422Peptidase S24-like
11111117Inorganic pyrophosphatase
555146121562Glycosyl hydrolases family 16
333243422Glycosyl hydrolases family 15
1411151352921108NADH:flavin oxidoreductase / NADH oxidase family
111111173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
222321214Glycosyl hydrolase family 20, catalytic domain
656647539HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
34404531184340251GMC oxidoreductase
246524225Asparagine synthase
3452292422537203Fungal cellulose binding domain
777777850Septin
11111117EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
332527628Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
334334323tRNA synthetases class I (E and Q), catalytic domain
121311110tRNA synthetases class I (R)
6958512853XPG N-terminal domain
1111106810763Metallo-beta-lactamase superfamily
1113F5/8 type C domain
444346429Choline/Carnitine o-acyltransferase
11111117Putative esterase
11Furin-like cysteine rich region
11111117Glycosyl hydrolase family 9
11111117Ferrochelatase
222222214Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
334334424RNB domain
252223521Dioxygenase
455647637CNH domain
222222214Diacylglycerol kinase catalytic domain
1215151413121293Dual specificity phosphatase, catalytic domain
11111117MyTH4 domain
555456333P21-Rho-binding domain
16151516161616110PX domain
454254327Ras association (RalGDS/AF-6) domain
444445328UBX domain
555655536VHS domain
11111117Phosphoinositide 3-kinase C2
222323216DAHP synthetase I family
432332320Carbon-nitrogen hydrolase
11N-acetyltransferase
224Geminivirus Rep catalytic domain
11111117Prephenate dehydratase
464442428Syntaxin
555454432Pumilio-family RNA binding repeat
667676644Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
11111117ER lumen protein retaining receptor
222222214Glycoprotease family
11111117Histidinol dehydrogenase
343333322impB/mucB/samB family
11114
11121118Ribosomal L15
111314314Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal prokaryotic L21 protein
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
11121118Ribosomal S17
11112118Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
793515535Glycosyl hydrolase family 7
222323216RNA pseudouridylate synthase
777878852Histone deacetylase domain
252223319POT family
222221213PWWP domain
24333730183523200SET domain
558867746Isochorismatase family
222323317Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
121213