PFAM Domains • Acaromyces ingoldii MCA 4198 v1.0
Annotations/GenomesAcain1Exova1Jamsp1Malgl1Meimi1Psean1_1Psehu1Rhodsp1Rhosp1Schco3Spore1Tescy1Tilan2Tilwa1Ustma1Ustsp1TotalAnnotation Description
PFAMs
6,4415,9785,3304,0575,9125,9785,8525,3755,7288,5905,9005,5155,2525,4555,6586,00493,025
1111111111111137 transmembrane receptor (rhodopsin family)
32343230333129323343292930313029507ATPase family associated with various cellular activities (AAA)
32292523263737303046342331333833507ABC transporter
444444444444344463ATP synthase alpha/beta family, nucleotide-binding domain
213EGF-like domain
14141414141314141315141413131314220Elongation factor Tu GTP binding domain
1188791313881312131191211166Helix-loop-helix DNA-binding domain
11111912211122Hsp20/alpha crystallin family
7778777777787779116Hsp70 protein
8787778879878888123KH domain
11111111111111115SH2 domain
22212315222222232327232220222222351SH3 domain
101010910109109111011891010156Actin
14161513171716161760161516151515293Ankyrin repeat
11114PAN domain
7867678677876788113ADP-ribosylation factor family
10131517119811122687107910183Eukaryotic aspartyl protease
333233333333333347Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
111111111111111116Cytochrome c
221222221332132140Double-stranded RNA binding motif
16151613151716131320161916151718255EF hand
1112122111211121214Fe-4S binding domain
111111112112111118Fibronectin type III domain
112Globin
1010729777615685847118Glutathione S-transferase, C-terminal domain
11111111211111116Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
5561755661166456488Homeodomain
222222222222222232lactate/malate dehydrogenase, NAD binding domain
445644455644554574Myosin head (motor domain)
3626126221818117114151114211922372Cytochrome P450
103939482103929395981629289919488991,568Protein kinase domain
1614147141617131211141311101313208Pyridine nucleotide-disulphide oxidoreductase
22232214222422222127242223222423357Ras family
13171041011121216121199101112179Response regulator receiver domain
219141241051116149RNase H
55585541545860565270615756545658901RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
112Retroviral aspartyl protease
1326Reverse transcriptase (RNA-dependent DNA polymerase)
422232221322232236Iron/manganese superoxide dismutases, alpha-hairpin domain
634334363344754567Subtilase family
3921268394030303441272419212126446Sugar (and other) transporter
118979101091113107981010151Thioredoxin
112Trypsin
444444445544444466Tubulin/FtsZ family, GTPase domain
1311111321121221von Willebrand factor type A domain
313525152833302433100303330282830533Zinc finger, C2H2 type
36343721323736373571393136323539588Zinc finger, C3HC4 type (RING finger)
119105713101182214966118160Zinc knuckle
222222222222212231Protein-tyrosine phosphatase
896640125645484344112453933404246800short chain dehydrogenase
41362017252730252647252218292325436Zinc-binding dehydrogenase
665366666466556587Thiolase, N-terminal domain
9231164113333251158Beta-ketoacyl synthase, N-terminal domain
4444453343445444632Fe-2S iron-sulfur cluster binding domain
11122111211111118Enolase, C-terminal TIM barrel domain
1113Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
7776777778777768112Glutamine amidotransferase class-I
999991099910910991010149TCP-1/cpn60 chaperonin family
11ATP synthase A chain
121112211322112124Glutamine synthetase, catalytic domain
222222221122222331Triosephosphate isomerase
13121291216131299141212131314195E1-E2 ATPase
8108886781722789779149Core histone H2A/H2B/H3/H4
11Bacterial regulatory helix-turn-helix protein, lysR family
213Copper binding proteins, plastocyanin/azurin family
543754341242343467Alpha amylase, catalytic domain
335135541555554564Phorbol esters/diacylglycerol binding domain (C1 domain)
555455546454464475Bacterial transferase hexapeptide (six repeats)
333333333333333348tRNA synthetases class I (I, L, M and V)
81076810681113996788134Cyclin, N-terminal domain
188816996926963899144Carboxylesterase family
444444444444444464DNA polymerase family B
23222223322221232ATP synthase subunit C
232223322232223540Peroxidase
332223431213231Beta-lactamase
222122226222330C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
20212116212421202024222018202121330Calcineurin-like phosphoesterase
756434742656475681Cellulase (glycosyl hydrolase family 5)
765665654666566792tRNA synthetases class II (D, K and N)
37393430373637353637363937343635575Mitochondrial carrier protein
19141510171415141716131315141315234Aminotransferase class I and II
7666777767787677108Phosphoribosyl transferase domain
9101081011101011141010109911162Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111111111116Phosphoglycerate kinase
222222222222222232Ribosomal protein S4/S9 N-terminal domain
122222222222222231Ribosomal protein S12/S23
1113Bacterial regulatory helix-turn-helix proteins, AraC family
111111111111111116Chaperonin 10 Kd subunit
111312711111112111812121010911181C2 domain
19211813211818201819172017201621296PH domain
656466738674454788bZIP transcription factor
18149612161611111614139101616207Aldehyde dehydrogenase family
11410050588101935245888776525483861,174Fungal Zn(2)-Cys(6) binuclear cluster domain
18161810181818181925171818181819286Cytochrome b5-like Heme/Steroid binding domain
33232221122122129Oxidoreductase molybdopterin binding domain
87767676611779877116Oxidoreductase NAD-binding domain
21202015151819202222191917191721304SNF2 family N-terminal domain
232232222222222234Ribosomal protein S7p/S5e
18171811181818161921181818181616278Ubiquitin-conjugating enzyme
7655587575876677101Isocitrate/isopropylmalate dehydrogenase
222221222222221230Ribosomal Proteins L2, RNA binding domain
11111111331111119Hsp90 protein
222222222222221231Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111111111116Dihydrofolate reductase
11Chitin recognition protein
131221352212227Cysteine-rich secretory protein family
111111111111111116Ribosomal protein S3, C-terminal domain
31213111Cupin
111111111111113Annexin
3332333333333333472-oxoacid dehydrogenases acyltransferase (catalytic domain)
532241222122230Catalase
11111111111111115Disintegrin
21111118UDP-glucoronosyl and UDP-glucosyl transferase
665455565555555784Aminotransferase class-III
222221222222222231Ribosomal protein S19
111111111111111116DNA gyrase B
241522224421222239Thiamine pyrophosphate enzyme, central domain
433333433333333350Lyase
222122222222222332Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Sodium:neurotransmitter symporter family
111111111111111116Adenylate and Guanylate cyclase catalytic domain
111111111111111116ATP synthase delta (OSCP) subunit
111111111111111116Orotidine 5'-phosphate decarboxylase / HUMPS family
111111112211111118Indole-3-glycerol phosphate synthase
1121112121112219Aromatic amino acid lyase
111111111111111116Pyruvate kinase, barrel domain
889979109810109910109144Kinesin motor domain
26262620262827242730272726252628419DnaJ domain
14141314141514141314141414141414223Proteasome subunit
6116185668354386692Major intrinsic protein
111111111111111116ATP synthase
2212113111116Glycosyl hydrolase family 1
111143'5'-cyclic nucleotide phosphodiesterase
1111111111111114Profilin
222213211122122228Ribosomal protein L22p/L17e
222222222222222232Ribosomal protein L14p/L23e
10988711912141310108111110161Ubiquitin family
343344334744423560Cofilin/tropomyosin-type actin-binding protein
11111111221111111814-3-3 protein
532144423344344454Alkaline phosphatase
11111211111113Zinc carboxypeptidase
2423131017171614146015129151315287Aldo/keto reductase family
14101381310108111197981213166Myb-like DNA-binding domain
433335532844435463Forkhead domain
22122211222222328Glycosyl hydrolases family 32 N-terminal domain
111111111111111116Ribosomal protein L16p/L10e
222121122222221228Ribosomal protein S14p/S29e
333333333533333350FKBP-type peptidyl-prolyl cis-trans isomerase
211111111111111117Glutathione peroxidase
212211221222122126
643342444744554568Flavodoxin
11Protamine P1
11111111111111115Calreticulin family
2231111112Common central domain of tyrosinase
543358645977547688Aminotransferase class-V
111111112311111119Ribonucleotide reductase, small chain
41383736364040404166403939414038652DEAD/DEAH box helicase
696167605768677073976965616967691,089Helicase conserved C-terminal domain
111111111111111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
111111112211111118Ribosomal protein L23
111111111111111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111111111111116Ribosomal protein L5
655363455744555577Pyridoxal-dependent decarboxylase conserved domain
111111121311221222Citrate synthase, C-terminal domain
555555555555555580GHMP kinases N terminal domain
794478746576665798Biotin carboxylase, N-terminal domain
111111111111111116Tryptophan synthase alpha chain
9785811976899771011131Pyridoxal-phosphate dependent enzyme
111210712111291114121011121212178NUDIX domain
433443444633344359pfkB family carbohydrate kinase
413123211321Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
222222222322222233Ribosomal protein L3
222222221222221230Ribosomal protein L11, RNA binding domain
99106101091011910101071010150Histidine phosphatase superfamily (branch 1)
111111111111111116Thymidylate synthase
11Lipoxygenase
444444445444344464ATP synthase alpha/beta chain, C terminal domain
434244544555445466Calponin homology (CH) domain
445456545556555578Glutamine amidotransferases class-II
222222222222222232Ribosomal protein S15
44'Cold-shock' DNA-binding domain
211331121Thaumatin family
111111111111111116Fructose-1-6-bisphosphatase, N-terminal domain
111111111111111116Ribonucleotide reductase, all-alpha domain
222222222222223233Ribosomal protein S2
211222223422322234SRF-type transcription factor (DNA-binding and dimerisation domain)
910108157101010121010791010157GATA zinc finger
181512816191717172119914111621250Amino acid permease
68524433757335534113Prolyl oligopeptidase family
121121111122112121Ribosomal protein L30p/L7e
108861199679866899129Histidine phosphatase superfamily (branch 2)
111111111111111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
444544444444444465Aconitase family (aconitate hydratase)
2225212117Glycosyl hydrolase family 10
1111221221112119Glycosyl hydrolases family 17
222222222222222232Ribosomal protein S5, N-terminal domain
222223222233313337Nucleoside diphosphate kinase
1111116Tetraspanin family
121111111211211220Ribosomal protein S10p/S20e
122122135111123Arrestin (or S-antigen), N-terminal domain
11111111111111216Phosphoglucose isomerase
112Carbohydrate phosphorylase
111111111111111116SecY translocase
11111111211111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222122222222231Ribosomal protein L6
333333333633333351Polyprenyl synthetase
222122222222222231Hexokinase
353353333933342358Dynamin family
121111111111111117Transcription factor TFIID (or TATA-binding protein, TBP)
443244344243244354Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
11Phytochrome region
224Proton-conducting membrane transporter
910649109689988898130Biotin-requiring enzyme
111111111111111116Phosphofructokinase
111212212222112225Ribosomal protein S17
111111111111111116Hydroxymethylglutaryl-coenzyme A reductase
33232332323332340FGGY family of carbohydrate kinases, N-terminal domain
1111951011111079121011111112161Enoyl-CoA hydratase/isomerase
222223222222222233Ribosomal protein S9/S16
233222222222322235Transcription factor TFIIB repeat
7755677656757779103Cytidine and deoxycytidylate deaminase zinc-binding region
111111112111111117Molybdopterin oxidoreductase
65734756429773734107Chromo (CHRromatin Organisation MOdifier) domain
222122221422221231Phosphatidylinositol-specific phospholipase C, Y domain
222122221322221230Phosphatidylinositol-specific phospholipase C, X domain
642346736765236575D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
221111122311111122Malic enzyme, N-terminal domain
1111111112111111176-phosphogluconate dehydrogenase, C-terminal domain
923656524665336879Multicopper oxidase
6993786769898888119WW domain
221223222222221231Ribosomal RNA adenine dimethylase
971041009110010210498104132103101106961001041,642WD domain, G-beta repeat
332123222432231338Heavy-metal-associated domain
11Dockerin type I domain
333332333333333347Adenylate kinase
213221112113221126Phosphoglucomutase/phosphomannomutase, C-terminal domain
212222212122122228Ribosomal protein S8
222222222122222231Ribosomal protein S11
455466664666655686LIM domain
11Matrixin
123112222321322332Regulator of chromosome condensation (RCC1) repeat
222222223222222233Ribosomal protein S13/S18
222222222222222232chorismate binding enzyme
32332333333233334560s Acidic ribosomal protein
444344544444444464Prenyltransferase and squalene oxidase repeat
655365665766554686Protein kinase C terminal domain
111111111111111116Single-strand binding protein family
111111111111211117S-adenosylmethionine synthetase, N-terminal domain
109910810999111010109109152Bromodomain
1310841011119119111111111110161Acyl-CoA dehydrogenase, C-terminal domain
13131412141313141417131312121313213Ubiquitin carboxyl-terminal hydrolase
1111111111111114Ribosomal protein L36
2111122122222122Ribonuclease T2 family
555255558455654680HSF-type DNA-binding
222222222222222232SRP54-type protein, GTPase domain
1111111112