PFAM Domains • Lyophyllum atratum DOB2229 v1.0
Annotations/GenomesAgrped1Cligib1Copang1Copmar1Copmic2Corgl3Crafun1Galma1Gymch1Gymjun1Hebcy2Hypsu1Lacbi2Lyoat1Panpap1Panst_LUM_1_1Phoaln1Phocon1Phohig1Trima3TotalAnnotation Description
PFAMs
8,72510,93214,4648,1169,3258,1799,5849,4978,85610,0917,6758,5128,65610,91110,98011,48911,3778,67711,5847,499195,129
3943614548434148524545503950395442424744917ATPase family associated with various cellular activities (AAA)
64467947575143686155445049526556796163461,136ABC transporter
4444444444444445844586ATP synthase alpha/beta family, nucleotide-binding domain
1214EGF-like domain
1515201516161515151618171618152118172415337Elongation factor Tu GTP binding domain
121015111411911111012112012101513101812247Helix-loop-helix DNA-binding domain
127912310681513771081291211175193Hsp20/alpha crystallin family
842288269121313141211159128151099283Hsp70 protein
997981288887888887887163KH domain
11Kunitz/Bovine pancreatic trypsin inhibitor domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
1111111111111SH2 domain
2915213132321729261528294022161720282127495SH3 domain
1210151113131111101111111511131912121312246Actin
31623196894677438931379585107441760833Ankyrin repeat
78118108898888910101010898175ADP-ribosylation factor family
2358201513232028272915242425163419232415475Eukaryotic aspartyl protease
3343333334333334333363Cyclic nucleotide-binding domain
1113Cytochrome b(C-terminal)/b6/petD
224Cytochrome b/b6/petB
1121111211111113112125Cytochrome c
7487885664851111954578136Double-stranded RNA binding motif
211219231711719119181811121615212EF hand
11111111211124Fe-4S binding domain
1111211111111115Fibronectin type III domain
12313711131571414951113111510618918279Glutathione S-transferase, C-terminal domain
2122213212215121111134Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
2417Hemopexin
98211018898989101014911119915215Homeodomain
12211119Laminin EGF domain
2222322222222222323243lactate/malate dehydrogenase, NAD binding domain
11Lectin C-type domain
58947565465776566465116Myosin head (motor domain)
1702791861551731719717417314189154861241631501781361501033,052Cytochrome P450
1672033551751991651801921872302061522172641692102441982321504,095Protein kinase domain
2211261622151420211417191412161612161811332Pyridine nucleotide-disulphide oxidoreductase
3142352734253435283429305332373528283328658Ras family
8710888888979787910898164Response regulator receiver domain
1223698301910109959813729629287RNase H
69577471806958697056656271675858726366711,326RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
132722Reverse transcriptase (RNA-dependent DNA polymerase)
11112212111211121121136Copper/zinc superoxide dismutase (SODC)
2252222323223423223250Iron/manganese superoxide dismutases, alpha-hairpin domain
8122522266171610151285112827158183292Subtilase family
3275421926263939384122332142484550355326752Sugar (and other) transporter
9111211101111131010101010111015911149217Thioredoxin
55556555659665578665115Tubulin/FtsZ family, GTPase domain
411366755764661von Willebrand factor type A domain
6918475279712160542258756323203528612349928Zinc finger, C2H2 type
678146168591074713566666314116731155796Zinc finger, C3HC4 type (RING finger)
271420191832839141020163411141181216343Zinc knuckle
2342232324222342623255Protein-tyrosine phosphatase
9393946161594980939248115496479144105130134541,697short chain dehydrogenase
5728723242293035464025373139415635414330789Zinc-binding dehydrogenase
4864655445544910410684115Thiolase, N-terminal domain
864369589545525106552112Beta-ketoacyl synthase, N-terminal domain
3113331331347311323492Fe-2S iron-sulfur cluster binding domain
314Papain family cysteine protease
2132211121121131232133Enolase, C-terminal TIM barrel domain
111216Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
88981010887977139998788170Glutamine amidotransferase class-I
101129241210121011131113131011111410129256TCP-1/cpn60 chaperonin family
1113ATP synthase A chain
3343343344447337345377Glutamine synthetase, catalytic domain
1111111211111111112122Triosephosphate isomerase
1219201211161814121614142016201920121817320E1-E2 ATPase
1817221720151515181716232417172020161423364Core histone H2A/H2B/H3/H4
11131131214Copper binding proteins, plastocyanin/azurin family
7159775787685959148676155Alpha amylase, catalytic domain
64565556644564445556100Phorbol esters/diacylglycerol binding domain (C1 domain)
6554753324534352344683Bacterial transferase hexapeptide (six repeats)
3553334534333454539380tRNA synthetases class I (I, L, M and V)
111017101810111514121113149121419111111253Cyclin, N-terminal domain
513229272815253428241640152130493434297568Carboxylesterase family
457454444445444494487DNA polymerase family B
3333343332334334333362ATP synthase subunit C
1514710616163423178223718141722322303Peroxidase
114Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
1222137114612141578210128813141199Beta-lactamase
4445444453444444444380C-5 cytosine-specific DNA methylase
1113NADH dehydrogenase
2726262930272630302231293324273323242530552Calcineurin-like phosphoesterase
13203113161027222031101492231222914248386Cellulase (glycosyl hydrolase family 5)
55556557556856555565109tRNA synthetases class II (D, K and N)
3940413738404241403837364140434441384237795Mitochondrial carrier protein
11215recA bacterial DNA recombination protein
1516191719121316131614131219162113121813307Aminotransferase class I and II
72377748746784433737108Phosphoribosyl transferase domain
1212161212121112121212141314121317121612258Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11Ribosome inactivating protein
1121111111111111111121Phosphoglycerate kinase
2222222222223222222241Ribosomal protein S4/S9 N-terminal domain
2222222222222222222240Ribosomal protein S12/S23
1121111111211112111123Chaperonin 10 Kd subunit
2114171514241527161417221816151414141517339C2 domain
2281119152082420516182410967191620297PH domain
481055895486671088106116144bZIP transcription factor
1826341613211518161412171522161818211820368Aldehyde dehydrogenase family
695469616361526364426666736243118536544731,261Fungal Zn(2)-Cys(6) binuclear cluster domain
2324262323222227242124232324252323252524474Cytochrome b5-like Heme/Steroid binding domain
2232321322423211232143Oxidoreductase molybdopterin binding domain
6799138899888877118986166Oxidoreductase NAD-binding domain
2531252835232229322627312242243032242523556SNF2 family N-terminal domain
2232322322223222223245Ribosomal protein S7p/S5e
2220262123242223222423232323272230232621468Ubiquitin-conjugating enzyme
66555866665667766666120Isocitrate/isopropylmalate dehydrogenase
2232222222222222223242Ribosomal Proteins L2, RNA binding domain
2222322393232232222252Hsp90 protein
3322222332222222325248Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111111111111111120Dihydrofolate reductase
11111123121116Chitin recognition protein
3752513422529222232164Cysteine-rich secretory protein family
1111111111111111111120Ribosomal protein S3, C-terminal domain
23252122141118221141Cupin
112161111122221111129Annexin
8412Eukaryotic-type carbonic anhydrase
11Chalcone and stilbene synthases, N-terminal domain
33355333333434333333662-oxoacid dehydrogenases acyltransferase (catalytic domain)
5345542593231234433272Catalase
1111211111111111111121Disintegrin
12212210116637356410494UDP-glucoronosyl and UDP-glucosyl transferase
6575655105555655106555116Aminotransferase class-III
2222222322224222422245Ribosomal protein S19
111111111111111111119DNA gyrase B
3544443455343444334376Thiamine pyrophosphate enzyme, central domain
4453544454354443444380Lyase
2142312222223322222243Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
151111121221113222131Adenylate and Guanylate cyclase catalytic domain
111111111111111111119ATP synthase delta (OSCP) subunit
1111111111111111111120Orotidine 5'-phosphate decarboxylase / HUMPS family
1224212111112211211231Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
2222232536422225222254Aromatic amino acid lyase
1111111111111111111120Pyruvate kinase, barrel domain
914109999889991099101191710197Kinesin motor domain
3629403237383238343032313637292936333830677DnaJ domain
1416191517141414141414141415141816141715302Proteasome subunit
89524767666476476447115Major intrinsic protein
2111111111111111111121ATP synthase
334232353333345334261Glycosyl hydrolase family 1
11212111121111111111233'5'-cyclic nucleotide phosphodiesterase
1111111111111111111120Profilin
1221112122211222212434Ribosomal protein L22p/L17e
2222322222222322223243Ribosomal protein L14p/L23e
1720282024181620201516182115151716142022372Ubiquitin family
55655556555555555545101Cofilin/tropomyosin-type actin-binding protein
125231111611121111133614-3-3 protein
312221322221113230Alkaline phosphatase
1121111111111162111127Zinc carboxypeptidase
6333473739362947424125372442346049454733810Aldo/keto reductase family
151091315138131371215141276812815225Myb-like DNA-binding domain
1156594561064855795655126Forkhead domain
111216Glycosyl hydrolases family 32 N-terminal domain
1221112112111322212130Ribosomal protein L16p/L10e
2222222222222223222241Ribosomal protein S14p/S29e
331246334943766934355102FKBP-type peptidyl-prolyl cis-trans isomerase
2111111211111111111122Glutathione peroxidase
222221222118
635610736625854573534103Flavodoxin
11Protamine P1
22Tropomyosin
1111111111111111211121Calreticulin family
101151321834953113693969148Common central domain of tyrosinase
10101079710799776119810799171Aminotransferase class-V
211647214162231282223282Ribonucleotide reductase, small chain
557212847637081495964525680896072835493621,389DEAD/DEAH box helicase
8796145901261061018810184911031151298493105871181032,052Helicase conserved C-terminal domain
11111121111111116Fructose-bisphosphate aldolase class-I
1111111111111111137128EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2232322222222222312242Ribosomal protein L23
1111113111111113111124Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111111121111111120Ribosomal protein L5
58445844755543776563105Pyridoxal-dependent decarboxylase conserved domain
3453434445333445635378Citrate synthase, C-terminal domain
55545555556565566555103GHMP kinases N terminal domain
77766677776769767786136Biotin carboxylase, N-terminal domain
1111111111111111111120Tryptophan synthase alpha chain
787877777777797109767148Pyridoxal-phosphate dependent enzyme
11'Paired box' domain
1814221718161418181818171414151322171715335NUDIX domain
4355754445645556645496pfkB family carbohydrate kinase
787383917652768795492132Glycosyl hydrolases family 28
2222222232222222222241Ribosomal protein L3
2322222221222222222240Ribosomal protein L11, RNA binding domain
87898118111110987109713878177Histidine phosphatase superfamily (branch 1)
11121111112111111111132Thymidylate synthase
621314121223Lipoxygenase
4444444444444445844586ATP synthase alpha/beta chain, C terminal domain
4354464434445537446487Calponin homology (CH) domain
6334562793555222253887Glutamine amidotransferases class-II
2222322222222322222242Ribosomal protein S15
2896714252343649353187Thaumatin family
1111111111111111111120Fructose-1-6-bisphosphatase, N-terminal domain
121722213123111116111160Ribonucleotide reductase, all-alpha domain
2222222222222222222240Ribosomal protein S2
3242255644233534365576SRF-type transcription factor (DNA-binding and dimerisation domain)
101020101513111211119111215103111111510258GATA zinc finger
261362019211031251018302389912271519351Amino acid permease
112Bacterial regulatory proteins, crp family
1186656898968869111210116163Prolyl oligopeptidase family
1261312111111232313137Ribosomal protein L30p/L7e
9147610679109710897117886168Histidine phosphatase superfamily (branch 2)
1111211111111111111121Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6444444465458446544493Aconitase family (aconitate hydratase)
86225825955176224566132Glycosyl hydrolase family 10
5433935443323662431376Glycosyl hydrolases family 17
2222222222222221222239Ribosomal protein S5, N-terminal domain
2222212222222222121237Nucleoside diphosphate kinase
5691218445223446725383Tetraspanin family
8112113Galactoside-binding lectin
2232222222222222322141Ribosomal protein S10p/S20e
55106734931668355244298Arrestin (or S-antigen), N-termina