PFAM Domains • Cryptococcus wieringae v1.0
Annotations/GenomesCryne_H99_1Cryvi1Crywi1Diocr1Fibin1Treme1Trich1Triol1TotalAnnotation Description
PFAMs
5,7325,5637,0229,5567,4005,5656,1756,30953,322
12147 transmembrane receptor (rhodopsin family)
3134365737363634301ATPase family associated with various cellular activities (AAA)
3438358335343537331ABC transporter
4445444433ATP synthase alpha/beta family, nucleotide-binding domain
2114EGF-like domain
1313131913131313110Elongation factor Tu GTP binding domain
98912788970Helix-loop-helix DNA-binding domain
11Hsp20/alpha crystallin family
8879778761Hsp70 protein
88711677862KH domain
112SH2 domain
2219122914222223163SH3 domain
10910191099985Actin
1816333151719121Ankyrin repeat
1111215PAN domain
87812888867ADP-ribosylation factor family
891111109141890Eukaryotic aspartyl protease
3333333324Cyclic nucleotide-binding domain
112Cytochrome b/b6/petB
11111117Cytochrome c
2111117Double-stranded RNA binding motif
1614222151616101EF hand
214111104Fe-4S binding domain
111126Fibronectin type III domain
11114Globin
84313428749Glutathione S-transferase, C-terminal domain
2223212216Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
6448745442Homeodomain
112Laminin EGF domain
2226223221lactate/malate dehydrogenase, NAD binding domain
4557575644Myosin head (motor domain)
51692298111696Cytochrome P450
8910410316699969595847Protein kinase domain
1112111612111315101Pyridine nucleotide-disulphide oxidoreductase
2323233125242423196Ras family
102222171291313118Response regulator receiver domain
1221121212RNase H
6252488155595755469RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1212Reverse transcriptase (RNA-dependent DNA polymerase)
1112113414Copper/zinc superoxide dismutase (SODC)
1112112110Iron/manganese superoxide dismutases, alpha-hairpin domain
3336332225Subtilase family
6229547465255239400Sugar (and other) transporter
8891298101074Thioredoxin
4447444435Tubulin/FtsZ family, GTPase domain
21614418von Willebrand factor type A domain
24248399282928189Zinc finger, C2H2 type
32335607373841253Zinc finger, C3HC4 type (RING finger)
119620915077219Zinc knuckle
2243322220Protein-tyrosine phosphatase
3538448555344449384short chain dehydrogenase
2527305430173636255Zinc-binding dehydrogenase
3435437837Thiolase, N-terminal domain
111211119Beta-ketoacyl synthase, N-terminal domain
35272434302Fe-2S iron-sulfur cluster binding domain
211111119Enolase, C-terminal TIM barrel domain
235Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
78911887765Glutamine amidotransferase class-I
101010131010111084TCP-1/cpn60 chaperonin family
213ATP synthase A chain
2222222216Glutamine synthetase, catalytic domain
111111118Triosephosphate isomerase
10111316149101194E1-E2 ATPase
889161111111286Core histone H2A/H2B/H3/H4
9911201197783Alpha amylase, catalytic domain
3334332425Phorbol esters/diacylglycerol binding domain (C1 domain)
95515686660Bacterial transferase hexapeptide (six repeats)
3346433329tRNA synthetases class I (I, L, M and V)
989141199978Cyclin, N-terminal domain
488685101160Carboxylesterase family
4446444434DNA polymerase family B
5333333326ATP synthase subunit C
1124Legume lectin domain
2224222319Peroxidase
23178281151Beta-lactamase
221229C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
112Nitrogenase component 1 type Oxidoreductase
1917173215182116155Calcineurin-like phosphoesterase
5814111564467Cellulase (glycosyl hydrolase family 5)
6669556548tRNA synthetases class II (D, K and N)
3432375737333936305Mitochondrial carrier protein
1616162217162116140Aminotransferase class I and II
76311467751Phosphoribosyl transferase domain
1312121812121212103Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
2222222216Ribosomal protein S4/S9 N-terminal domain
2223222217Ribosomal protein S12/S23
111211119Chaperonin 10 Kd subunit
121110171012111497C2 domain
16105219171416108PH domain
77991256661bZIP transcription factor
141014151691819115Aldehyde dehydrogenase family
7758661018153100102638Fungal Zn(2)-Cys(6) binuclear cluster domain
1918203219172123169Cytochrome b5-like Heme/Steroid binding domain
246Oxidoreductase molybdopterin binding domain
78810559961Oxidoreductase NAD-binding domain
2119273523192120185SNF2 family N-terminal domain
2224222218Ribosomal protein S7p/S5e
1916162820201919157Ubiquitin-conjugating enzyme
76811657656Isocitrate/isopropylmalate dehydrogenase
2223222217Ribosomal Proteins L2, RNA binding domain
2214222217Hsp90 protein
2223222217Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111211119Dihydrofolate reductase
2226334527Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
2136Cupin
111211119Annexin
2125Eukaryotic-type carbonic anhydrase
112Chalcone and stilbene synthases, N-terminal domain
32253343252-oxoacid dehydrogenases acyltransferase (catalytic domain)
4333212220Catalase
2112111110Disintegrin
238821UDP-glucoronosyl and UDP-glucosyl transferase
8571011691066Aminotransferase class-III
2224222218Ribosomal protein S19
111211119DNA gyrase B
2433223423Thiamine pyrophosphate enzyme, central domain
3335334327Lyase
2222222216Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
213Sodium:neurotransmitter symporter family
111211119Adenylate and Guanylate cyclase catalytic domain
111211119ATP synthase delta (OSCP) subunit
111111118Orotidine 5'-phosphate decarboxylase / HUMPS family
111211119Indole-3-glycerol phosphate synthase
11Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
109101310129982Kinesin motor domain
2324223524252623202DnaJ domain
1414141914141414117Proteasome subunit
1227314323Major intrinsic protein
111211119ATP synthase
243112215Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
111111118Profilin
1221212112Ribosomal protein L22p/L17e
2223222217Ribosomal protein L14p/L23e
121181791091086Ubiquitin family
5558555543Cofilin/tropomyosin-type actin-binding protein
11121111914-3-3 protein
2131119Alkaline phosphatase
111111118Zinc carboxypeptidase
2125274833232020217Aldo/keto reductase family
75312411121165Myb-like DNA-binding domain
6347545438Forkhead domain
11121129Glycosyl hydrolases family 32 N-terminal domain
1121211110Ribosomal protein L16p/L10e
2225222219Ribosomal protein S14p/S29e
3337333328FKBP-type peptidyl-prolyl cis-trans isomerase
2213222216Glutathione peroxidase
1121117
11Dehydrin
5444346737Flavodoxin
11Tropomyosin
111211119Calreticulin family
11Common central domain of tyrosinase
5768546445Aminotransferase class-V
2113222215Ribonucleotide reductase, small chain
4140436244373638341DEAD/DEAH box helicase
71666810971656566581Helicase conserved C-terminal domain
111211119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2124122216Ribosomal protein L23
1112111311Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2112122112Ribosomal protein L5
3458554438Pyridoxal-dependent decarboxylase conserved domain
1121211110Citrate synthase, C-terminal domain
5458445439GHMP kinases N terminal domain
6546557745Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
8981166101169Pyridoxal-phosphate dependent enzyme
91292212101314101NUDIX domain
63411647647pfkB family carbohydrate kinase
154641122Glycosyl hydrolases family 28
33Luciferase-like monooxygenase
2223222217Ribosomal protein L3
2224222218Ribosomal protein L11, RNA binding domain
97924129121092Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
11Lipoxygenase
4445444433ATP synthase alpha/beta chain, C terminal domain
3435444431Calponin homology (CH) domain
4539245436Glutamine amidotransferases class-II
2223222217Ribosomal protein S15
22232314Thaumatin family
111211119Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
2223222217Ribosomal protein S2
2223222217SRF-type transcription factor (DNA-binding and dimerisation domain)
12981610910983GATA zinc finger
169517953036127Amino acid permease
4354522227Prolyl oligopeptidase family
1123222114Ribosomal protein L30p/L7e
5467554541Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
5555544437Aconitase family (aconitate hydratase)
11114Glycosyl hydrolase family 10
1111116Glycosyl hydrolases family 17
2222212215Ribosomal protein S5, N-terminal domain
2113212214Nucleoside diphosphate kinase
1112117Tetraspanin family
2122211112Ribosomal protein S10p/S20e
2233221217Arrestin (or S-antigen), N-terminal domain
1112112110Phosphoglucose isomerase
111211119Carbohydrate phosphorylase
121111119SecY translocase
111211119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
3335433327Polyprenyl synthetase
2223222217Hexokinase
3349533333Dynamin family
111211119Transcription factor TFIID (or TATA-binding protein, TBP)
3435343328Rieske [2Fe-2S] domain
22Bacterial regulatory proteins, lacI family
11111117Phytochrome region
426Proton-conducting membrane transporter
86510769960Biotin-requiring enzyme
1112112110Phosphofructokinase
2223222217Ribosomal protein S17
111111118Hydroxymethylglutaryl-coenzyme A reductase
3335324427FGGY family of carbohydrate kinases, N-terminal domain
22Sodium:dicarboxylate symporter family
5451064121460Enoyl-CoA hydratase/isomerase
2223222217Ribosomal protein S9/S16
2223212216Transcription factor TFIIB repeat
10455646848Cytidine and deoxycytidylate deaminase zinc-binding region
1222111111Molybdopterin oxidoreductase
83289276568Chromo (CHRromatin Organisation MOdifier) domain
1112111210Phosphatidylinositol-specific phospholipase C, Y domain
2114112416Phosphatidylinositol-specific phospholipase C, X domain
966101199767D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
3224322220Malic enzyme, N-terminal domain
11222211126-phosphogluconate dehydrogenase, C-terminal domain
5231244526Multicopper oxidase
768149810870WW domain
1222212113Ribosomal RNA adenine dimethylase
102989815810097102102857WD domain, G-beta repeat
1446434329Heavy-metal-associated domain
3335333326Adenylate kinase
1223222216Phosphoglucomutase/phosphomannomutase, C-terminal domain
1221211111Ribosomal protein S8
112111119Ribosomal protein S11
4448544437LIM domain
1151226220Regulator of chromosome condensation (RCC1) repeat
2222222216Ribosomal protein S13/S18
22NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2324222219chorismate binding enzyme
333333232360s Acidic ribosomal protein
4537344434Prenyltransferase and squalene oxidase repeat
4449343435Protein kinase C terminal domain
1113112212Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
109916109111185Bromodomain
756777111767Acyl-CoA dehydrogenase, C-terminal domain
1414142415181414127Ubiquitin carboxyl-terminal hydrolase
111211119Ribosomal protein L36
11215Ribonuclease T2 family
11Gonadotropin-releasing hormone
4559656545HSF-type DNA-binding
2224222218SRP54-type protein, GTPase domain
111111118Urease alpha-subunit, N-terminal domain
7356432333Serine carboxypeptidase
88812887766Phosphatidylinositol 3- and 4-kinase
5235322123Transketolase, thiamine diphosphate binding domain
3338324329Inositol monophosphatase family
4446444434Glutaredoxin
1112113212Isocitrate lyase family
111211119Serine hydroxymethyltransferase
1111211210Iron-containing alcohol dehydrogenase
2222222216Ribosomal protein L10
4446454536KOW motif
11211118Ribosomal protein L34
1111116Ribosomal protein L33
3235333325RF-1 domain
11122119Sodium:solute symporter family
111111118Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
111111118IMP dehydrogenase / GMP reductase domain
1331111112Glucose-6-phosphate dehydrogenase, NAD binding domain
56512655549Protein phosphatase 2C
2224222218Nucleotidyl transferase
2125324524Carbonic anhydrase
1111221110Phosphoribulokinase / Uridine kinase family
4556556541Fatty acid desaturase
66611667755MutS domain V
111211119Delta-aminolevulinic acid dehydratase
3121213215Arginase family
6669666651MCM P-loop domain
1233321116Squalene/phytoene synthase
75710778758FHA domain
213NADH-ubiquinone/plastoquinone oxidoreductase chain 6
91412161082533127AMP-binding enzyme
3335333326G-protein alpha subunit
7758566650HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1113Cytochrome c oxidase subunit III
715181497101090His Kinase A (phospho-acceptor) domain
2434222221Armadillo/beta-catenin-like repeat
2221102510162219145Tetratricopeptide repeat
3328333429Ion transport protein
111211119DNA gyrase/topoisomerase IV, subunit A
7118156108772BRCA1 C Terminus (BRCT) domain
77611677657Glycosyl transferases group 1
2324122218Glycosyl transferase family 2
111216SAM domain (Sterile alpha motif)
2112111110linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
11ribonuclease
111111118Urease, gamma subunit
3337334430CoA-ligase
2468423231Phosphopantetheine attachment site
3235334326Formyl transferase
1010101399111183Metallopeptidase family M24
17141271192016115Leucine Rich Repeat
9106234122121106alpha/beta hydrolase fold
3434333326RNA polymerase Rpb2, domain 6
3336433328PB1 domain
2223222217Staphylococcal nuclease homologue
991218138101089Rab-GTPase-TBC domain
111211119Tudor domain
111111118WH1 domain
3444444330Zinc finger, ZZ type
2114222115HRDC domain
75611678858CBS domain
2223222217Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
3347444433S1 RNA binding domain
11111218HIUase/Transthyretin family
3335444329AhpC/TSA family
3445444432tRNA synthetases class I (W and Y)
111211119UvrD/REP helicase N-terminal domain
4388634541Rhodanese-like domain
2223222217Universal stress protein family
1820165816173839222Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2224222218AIR synthase related protein, N-terminal domain
6658566648tRNA synthetase class II core domain (G, H, P, S and T)
123Phage integrase family
2224222218Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
2134513625Class II Aldolase and Adducin N-terminal domain
1243423221Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
5256543333Fes/CIP4, and EFC/F-BAR homology domain
7223233628IQ calmodulin-binding motif
2223222217Phosphoinositide 3-kinase family, accessory domain (PIK domain)
4326145429Phospholipase D Active site motif
1141411114Regulator of G protein signaling domain
3343444429GTPase-activator protein for Ras-like GTPase
3345333327RasGEF domain
3343333325RasGEF N-terminal motif
9810181111101087RhoGAP domain
14912171212111198RhoGEF domain
3335323325SPRY domain
3334333325RNA polymerase Rpb1, domain 2
1112112110Guanylate kinase
3224232220Gelsolin repeat
8126147717778UBA/TS-N domain
1517112113131617123PHD-finger
2111218GGL domain
4446444434HECT-domain (ubiquitin-transferase)
21211119Helix-hairpin-helix motif
111211119MSP (Major sperm protein) domain
54211483441Ribonuclease III domain
2242522221Region in Clathrin and VPS
3224323322RanBP1 domain
111111118PPIC-type PPIASE domain
1214231418Zn-finger in Ran binding protein and others
19157258141719124Zinc finger C-x8-C-x5-C-x3-H type (and similar)
211127Poly(ADP-ribose) polymerase catalytic domain
111111118Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
201623004192631418F-box domain
111111118Elongation factor 1 gamma, conserved domain
11114Calpain family cysteine protease
111211119Copper fist DNA binding domain
5759556648CRAL/TRIO domain
52516682448BTB/POZ domain
51371713111129106Ricin-type beta-trefoil lectin domain
111211119Inhibitor of Apoptosis domain
2223222217Voltage gated chloride channel
2114322217Caspase domain
368423430GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
111211119POLO box duplicated region
213NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
1518174117191416157ABC transporter transmembrane region
41317Integrase core domain
3445334531FAD binding domain
11Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111111118HAMP domain
2224222218ribosomal L5P family C-terminus
5657556544Insulinase (Peptidase family M16)
3223444426Dehydrogenase E1 component
111111118Lumazine binding domain
5558555543Elongation factor G C-terminus
4336444432HMGL-like
4438444435DnaJ central domain
2232322218Ribosomal protein L1p/L10e family
4558435640Cation transporting ATPase, C-terminus
66610656752Cation transporter/ATPase, N-terminus
2112222214dUTPase
5555544437Aconitase C-terminal domain
3334333325Amino acid kinase family
111211119N-(5'phosphoribosyl)anthranilate (PRA) isomerase
111211119Acyl transferase domain
111111118Urease beta subunit
4332412221Dihydrodipicolinate synthetase family
262093510192226167haloacid dehalogenase-like hydrolase
16312316Glycosyl hydrolases family 2
3454533229Glycosyl hydrolases family 18
111111118Proliferating cell nuclear antigen, N-terminal domain
111111118Acylphosphatase
111211119Adenylosuccinate synthetase
1334111115Asparaginase, N-terminal
2324333323Peptidase S24-like
1114111111Inorganic pyrophosphatase
1436521224Glycosyl hydrolases family 16
2113222215Glycosyl hydrolases family 15
5367435336NADH:flavin oxidoreductase / NADH oxidase family
22232246233-hydroxyacyl-CoA dehydrogenase, C-terminal domain
113113212Glycosyl hydrolase family 20, catalytic domain
3455433330HhH-GPD superfamily base excision DNA repair protein
111211119AIR carboxylase
2336425631GMC oxidoreductase
2335322222Asparagine synthase
5458544439Septin
111111118EF-1 guanine nucleotide exchange domain
111211119Homoserine dehydrogenase
215335221Flavin-binding monooxygenase-like
3333333425tRNA synthetases class I (E and Q), catalytic domain
111111118tRNA synthetases class I (R)
6659564647XPG N-terminal domain
765125711962Metallo-beta-lactamase superfamily
3223334323Choline/Carnitine o-acyltransferase
111211119Putative esterase
111211119Glycosyl hydrolase family 9
111211119Ferrochelatase
2223232319Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111211119Arginosuccinate synthase
111111118Electron transfer flavoprotein FAD-binding domain
3334333325RNB domain
2213412Dioxygenase
3224432323CNH domain
2114222216Diacylglycerol kinase catalytic domain
64512666651Dual specificity phosphatase, catalytic domain
11111117MyTH4 domain
4335344329P21-Rho-binding domain
121212