PFAM Domains • Chionosphaera cuniculicola CBS10063 v1.0
Annotations/GenomesAgahy1Atrsp2Chiap1Chicu1Eryha1Sepsp1Spopa1TotalAnnotation Description
PFAMs
5,7229,0845,8026,9866,6726,6267,34948,241
11137 transmembrane receptor (rhodopsin family)
30503232383531248ATPase family associated with various cellular activities (AAA)
30913327373030278ABC transporter
455444430ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
13191413131414100Elongation factor Tu GTP binding domain
912111099868Helix-loop-helix DNA-binding domain
18323219Hsp20/alpha crystallin family
81677711864Hsp70 protein
8118787655KH domain
11114SH2 domain
23272214192014139SH3 domain
91410109101072Actin
1717182019495Ankyrin repeat
2518PAN domain
7107799756ADP-ribosylation factor family
11321211142515120Eukaryotic aspartyl protease
333332320Cyclic nucleotide-binding domain
11111117Cytochrome c
141219Double-stranded RNA binding motif
20221621916499EF hand
1111154Fe-4S binding domain
1111217Fibronectin type III domain
72265139668Glutathione S-transferase, C-terminal domain
11112118Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
8687814657Homeodomain
112Laminin EGF domain
233222216lactate/malate dehydrogenase, NAD binding domain
555455534Myosin head (motor domain)
1363242626858245Cytochrome P450
108202143112105117100887Protein kinase domain
112211815101188Pyridine nucleotide-disulphide oxidoreductase
25332526222725183Ras family
1111141317131392Response regulator receiver domain
2562214132RNase H
55925953626257440RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
211127Copper/zinc superoxide dismutase (SODC)
212211110Iron/manganese superoxide dismutases, alpha-hairpin domain
4175833646Subtilase family
34531537362340238Sugar (and other) transporter
1116101011111382Thioredoxin
4124344435Tubulin/FtsZ family, GTPase domain
252312von Willebrand factor type A domain
30534318445715260Zinc finger, C2H2 type
344640445405214Zinc finger, C3HC4 type (RING finger)
9201741421691Zinc knuckle
233321418Protein-tyrosine phosphatase
511124953846637452short chain dehydrogenase
22663336403227256Zinc-binding dehydrogenase
374556636Thiolase, N-terminal domain
11111117Beta-ketoacyl synthase, N-terminal domain
5243353252Fe-2S iron-sulfur cluster binding domain
115111212Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
687788852Glutamine amidotransferase class-I
913111110111075TCP-1/cpn60 chaperonin family
11ATP synthase A chain
252233219Glutamine synthetase, catalytic domain
12211119Triosephosphate isomerase
81791512111284E1-E2 ATPase
1521136201916110Core histone H2A/H2B/H3/H4
1113Copper binding proteins, plastocyanin/azurin family
163388332Alpha amylase, catalytic domain
245335325Phorbol esters/diacylglycerol binding domain (C1 domain)
653477739Bacterial transferase hexapeptide (six repeats)
282336428tRNA synthetases class I (I, L, M and V)
1121871091076Cyclin, N-terminal domain
32134612857Carboxylesterase family
454444429DNA polymerase family B
383333326ATP synthase subunit C
11Legume lectin domain
121122211Peroxidase
26137322Beta-lactamase
3238C-5 cytosine-specific DNA methylase
21311817202216145Calcineurin-like phosphoesterase
283101171152Cellulase (glycosyl hydrolase family 5)
555555434tRNA synthetases class II (D, K and N)
33473435414137268Mitochondrial carrier protein
11recA bacterial DNA recombination protein
16281616141316119Aminotransferase class I and II
6106477343Phosphoribosyl transferase domain
1315171211131293Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
11Bacterial regulatory helix-turn-helix proteins, AraC family
12111118Chaperonin 10 Kd subunit
13151310911980C2 domain
20201912131510109PH domain
72769561171bZIP transcription factor
10271011181611103Aldehyde dehydrogenase family
521413035635747425Fungal Zn(2)-Cys(6) binuclear cluster domain
17301616232118141Cytochrome b5-like Heme/Steroid binding domain
342110Oxidoreductase molybdopterin binding domain
687798550Oxidoreductase NAD-binding domain
18312119191923150SNF2 family N-terminal domain
221222213Ribosomal protein S7p/S5e
17241818182020135Ubiquitin-conjugating enzyme
5115556542Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
232224217Hsp90 protein
232222215Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
1113Chitin recognition protein
544325326Cysteine-rich secretory protein family
12111118Ribosomal protein S3, C-terminal domain
1161119Cupin
2114Annexin
2125Eukaryotic-type carbonic anhydrase
11Chalcone and stilbene synthases, N-terminal domain
2322244192-oxoacid dehydrogenases acyltransferase (catalytic domain)
223133216Catalase
11111218Disintegrin
111422121UDP-glucoronosyl and UDP-glucosyl transferase
766776544Aminotransferase class-III
242222216Ribosomal protein S19
11111117DNA gyrase B
354352325Thiamine pyrophosphate enzyme, central domain
323333320Lyase
112222212Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111117Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
12111118Orotidine 5'-phosphate decarboxylase / HUMPS family
22111119Indole-3-glycerol phosphate synthase
11114Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
91287810862Kinesin motor domain
26392828293327210DnaJ domain
14171414141414101Proteasome subunit
2533105533Major intrinsic protein
11111117ATP synthase
1315Glycosyl hydrolase family 1
121111183'5'-cyclic nucleotide phosphodiesterase
11111117Profilin
121212211Ribosomal protein L22p/L17e
232222316Ribosomal protein L14p/L23e
12201016161516105Ubiquitin family
445444429Cofilin/tropomyosin-type actin-binding protein
22222221414-3-3 protein
232145219Alkaline phosphatase
13111119Zinc carboxypeptidase
22772325211515198Aldo/keto reductase family
12121061011667Myb-like DNA-binding domain
557744234Forkhead domain
121318Glycosyl hydrolases family 32 N-terminal domain
122211211Ribosomal protein L16p/L10e
232222215Ribosomal protein S14p/S29e
454453328FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
111216
4116445337Flavodoxin
123111110Calreticulin family
1212Common central domain of tyrosinase
595756643Aminotransferase class-V
212213213Ribonucleotide reductase, small chain
36494540394549303DEAD/DEAH box helicase
64897262727673508Helicase conserved C-terminal domain
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
211221211Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
12111118Ribosomal protein L5
576565539Pyridoxal-dependent decarboxylase conserved domain
122322315Citrate synthase, C-terminal domain
565555536GHMP kinases N terminal domain
475546637Biotin carboxylase, N-terminal domain
12111118Tryptophan synthase alpha chain
7157689658Pyridoxal-phosphate dependent enzyme
1118141213131394NUDIX domain
465554433pfkB family carbohydrate kinase
325Glycosyl hydrolases family 28
112Luciferase-like monooxygenase
233222216Ribosomal protein L3
222222214Ribosomal protein L11, RNA binding domain
13131312271410102Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
527Lipoxygenase
455444430ATP synthase alpha/beta chain, C terminal domain
474445432Calponin homology (CH) domain
494356233Glutamine amidotransferases class-II
222222113Ribosomal protein S15
231223316'Cold-shock' DNA-binding domain
353516Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
21111118Ribonucleotide reductase, all-alpha domain
232222215Ribosomal protein S2
343333423SRF-type transcription factor (DNA-binding and dimerisation domain)
10121110891272GATA zinc finger
14288414249101Amino acid permease
564635837Prolyl oligopeptidase family
131111210Ribosomal protein L30p/L7e
6104669647Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
454454430Aconitase family (aconitate hydratase)
33Glycosyl hydrolase family 10
1111116Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
111122210Nucleoside diphosphate kinase
11114Tetraspanin family
12311210Ribosomal protein S10p/S20e
33525422Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111319Carbohydrate phosphorylase
11111117SecY translocase
12111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
333334322Polyprenyl synthetase
232222215Hexokinase
584447537Dynamin family
11211118Transcription factor TFIID (or TATA-binding protein, TBP)
435464228Rieske [2Fe-2S] domain
11Phytochrome region
5866510747Biotin-requiring enzyme
11111117Phosphofructokinase
242222216Ribosomal protein S17
11111218Hydroxymethylglutaryl-coenzyme A reductase
343342221FGGY family of carbohydrate kinases, N-terminal domain
11Sodium:dicarboxylate symporter family
4118768751Enoyl-CoA hydratase/isomerase
222222214Ribosomal protein S9/S16
332232217Transcription factor TFIIB repeat
585579746Cytidine and deoxycytidylate deaminase zinc-binding region
11112118Molybdopterin oxidoreductase
666458641Chromo (CHRromatin Organisation MOdifier) domain
232212113Phosphatidylinositol-specific phospholipase C, Y domain
234312116Phosphatidylinositol-specific phospholipase C, X domain
9957125653D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
131122212Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
211121196-phosphogluconate dehydrogenase, C-terminal domain
442325121Multicopper oxidase
957987651WW domain
11112129Ribosomal RNA adenine dimethylase
9813410497105162102802WD domain, G-beta repeat
142344220Heavy-metal-associated domain
343443324Adenylate kinase
222222315Phosphoglucomutase/phosphomannomutase, C-terminal domain
252212216Ribosomal protein S8
11111117Ribosomal protein S11
695556642LIM domain
423611724Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
121112210chorismate binding enzyme
35333332360s Acidic ribosomal protein
554448333Prenyltransferase and squalene oxidase repeat
6105455439Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
81210989965Bromodomain
214885121059Acyl-CoA dehydrogenase, C-terminal domain
16191516151416111Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
15118Ribonuclease T2 family
6476451042HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
71934715560Serine carboxypeptidase
81110998863Phosphatidylinositol 3- and 4-kinase
221122111Transketolase, thiamine diphosphate binding domain
112228WHEP-TRS domain
332233319Inositol monophosphatase family
566546436Glutaredoxin
223232216Isocitrate lyase family
13111119Serine hydroxymethyltransferase
122241214Iron-containing alcohol dehydrogenase
121322213Ribosomal protein L10
443262425KOW motif
111115Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
1113Ribosomal protein L33
332321317RF-1 domain
21511313Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
12111219IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
585565640Protein phosphatase 2C
213322215Nucleotidyl transferase
331213215Carbonic anhydrase
113128Phosphoribulokinase / Uridine kinase family
564456535Fatty acid desaturase
667687747MutS domain V
11121118Delta-aminolevulinic acid dehydratase
251113215Arginase family
687666645MCM P-loop domain
222222315Squalene/phytoene synthase
8146756955FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
8351214222415130AMP-binding enzyme
911131085965G-protein alpha subunit
81677981166HMG (high mobility group) box
789101491067His Kinase A (phospho-acceptor) domain
282234324Armadillo/beta-catenin-like repeat
24322714245612189Tetratricopeptide repeat
253142320Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
1087789857BRCA1 C Terminus (BRCT) domain
675589848Glycosyl transferases group 1
325254526Glycosyl transferase family 2
21115SAM domain (Sterile alpha motif)
131112110linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
22ribonuclease
11111117Urease, gamma subunit
353333323CoA-ligase
353244324Phosphopantetheine attachment site
372223221Formyl transferase
71689781065Metallopeptidase family M24
15131811615381Leucine Rich Repeat
204619329207144alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
293335530PB1 domain
221222213Staphylococcal nuclease homologue
912101111111276Rab-GTPase-TBC domain
11111117Tudor domain
1211117WH1 domain
343224220Zinc finger, ZZ type
1111127HRDC domain
799687551CBS domain
232222215Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11114Clp protease
453334426S1 RNA binding domain
11111117HIUase/Transthyretin family
342252321AhpC/TSA family
454444429tRNA synthetases class I (W and Y)
212133214UvrD/REP helicase N-terminal domain
444944938Rhodanese-like domain
534342223Universal stress protein family
16592413372215186Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
232222215AIR synthase related protein, N-terminal domain
767678546tRNA synthetase class II core domain (G, H, P, S and T)
222222214Tetrapyrrole (Corrin/Porphyrin) Methylases
11112118Glycosyl transferase family, a/b domain
11PDZ domain
222252318Class II Aldolase and Adducin N-terminal domain
333422219Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
553545431Fes/CIP4, and EFC/F-BAR homology domain
344225222IQ calmodulin-binding motif
223222215Phosphoinositide 3-kinase family, accessory domain (PIK domain)
354243223Phospholipase D Active site motif
111411514Regulator of G protein signaling domain
354444327GTPase-activator protein for Ras-like GTPase
454444429RasGEF domain
454444429RasGEF N-terminal motif
131612911111284RhoGAP domain
121711139141288RhoGEF domain
353332221SPRY domain
343334323RNA polymerase Rpb1, domain 2
11111117Guanylate kinase
373343326Gelsolin repeat
7119686754UBA/TS-N domain
16191612181714112PHD-finger
11111117GGL domain
464445633HECT-domain (ubiquitin-transferase)
2212119Helix-hairpin-helix motif
11BRCA2 repeat
11111117MSP (Major sperm protein) domain
372392632Ribonuclease III domain
342522523Region in Clathrin and VPS
323343321RanBP1 domain
12111219PPIC-type PPIASE domain
11Zn-finger in Ran binding protein and others
152215818198105Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11B-box zinc finger
541116119Poly(ADP-ribose) polymerase catalytic domain
11112118Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
36149266615024352F-box domain
1111116Elongation factor 1 gamma, conserved domain
1111116Calpain family cysteine protease
241111212Copper fist DNA binding domain
8987913559CRAL/TRIO domain
1177756447BTB/POZ domain
112Ricin-type beta-trefoil lectin domain
111115Inhibitor of Apoptosis domain
333333321Voltage gated chloride channel
141111110Caspase domain
265510331GDSL-like Lipase/Acylhydrolase
12121119Poly-adenylate binding protein, unique domain
11111117POLO box duplicated region
14531112151113129ABC transporter transmembrane region
333343322FAD binding domain
1225Condensation domain
12112119S-adenosyl-L-homocysteine hydrolase, NAD binding domain
13111119HAMP domain
131222213ribosomal L5P family C-terminus
698655746Insulinase (Peptidase family M16)
252224421Dehydrogenase E1 component
11111117Lumazine binding domain
574555536Elongation factor G C-terminus
354444428HMGL-like
444444428DnaJ central domain
2215Sulfotransferase domain
617Starch binding domain
222322316Ribosomal protein L1p/L10e family
453765434Cation transporting ATPase, C-terminus
595687545Cation transporter/ATPase, N-terminus
131112110dUTPase
454454430Aconitase C-terminal domain
343334323Amino acid kinase family
12111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
222222214Acyl transferase domain
11111117Urease beta subunit
121131110Dihydrodipicolinate synthetase family
22362010262210146haloacid dehalogenase-like hydrolase
152111112Glycosyl hydrolases family 2
6103455740Glycosyl hydrolases family 18
131112110Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
111115Acylphosphatase
11111117Adenylosuccinate synthetase
212311313Asparaginase, N-terminal
223323318Peptidase S24-like
11111117Inorganic pyrophosphatase
613811029Glycosyl hydrolases family 16
232221315Glycosyl hydrolases family 15
283464532NADH:flavin oxidoreductase / NADH oxidase family
1211422133-hydroxyacyl-CoA dehydrogenase, C-terminal domain
232212113Glycosyl hydrolase family 20, catalytic domain
554466535HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
1212237541GMC oxidoreductase
232233217Asparagine synthase
14112110Fungal cellulose binding domain
585545436Septin
11111117EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
18151218Flavin-binding monooxygenase-like
343333322tRNA synthetases class I (E and Q), catalytic domain
12111118tRNA synthetases class I (R)
5106655643XPG N-terminal domain
914108135665Metallo-beta-lactamase superfamily
122510F5/8 type C domain
333344424Choline/Carnitine o-acyltransferase
11111117Putative esterase
21115Glycosyl hydrolase family 9
11111117Ferrochelatase
332221215Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11111117Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333333321RNB domain
25242318Dioxygenase
223422318CNH domain
222222214Diacylglycerol kinase catalytic domain
8117778654Dual specificity phosphatase, catalytic domain
111115MyTH4 domain
393323326P21-Rho-binding domain
14171616141215104PX domain
335314322Ras association (RalGDS/AF-6) domain
455446432UBX domain
455555433VHS domain
11211118Phosphoinositide 3-kinase C2
232222215DAHP synthetase I family
466675741Carbon-nitrogen hydrolase
31121311N-acetyltransferase
11111117Prephenate dehydratase
583263431Syntaxin
4124354335Pumilio-family RNA binding repeat
674668845Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
11111128ER lumen protein retaining receptor
232222215Glycoprotease family
1112117Histidinol dehydrogenase
495554335impB/mucB/samB family
111115
11112118Ribosomal L15
111311311Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1113Ribosomal prokaryotic L21 protein
111115Ribosomal L28 family
11111117Ribosomal L29 protein
13111119Ribosomal L39 protein
13111119Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
13111119Translationally controlled tumour protein
22Ring hydroxylating alpha subunit (catalytic domain)
142122214RNA pseudouridylate synthase
596667746Histone deacetylase domain
213Glycosyltransferase family 10 (fucosyltransferase) C-term
231118POT family
321211111PWWP domain
13161516131718108SET domain
173233221Isochorismatase family
11316Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
595544638XPG I-region
11111117Acetokinase family
313133216DNA photolyase
1111116Cation-independent mannose-6-phosphate receptor repeat
11Nitroreductase family
11111117Cytosol aminopeptidase family, catalytic domain
21334114Sulfatase
1111111