PFAM Domains • Microdochium bolleyi J235TASD1 v1.0
Annotations/GenomesAntav1Apimo1DalEC12_1Eutla1HypCI4A_1HypCO275_1HypEC38_1Micbo1TotalAnnotation Description
PFAMs
10,48610,5738,5329,0438,6989,1559,11911,47777,083
2137 transmembrane receptor (rhodopsin family)
117 transmembrane receptor (Secretin family)
8873536256615848499ATPase family associated with various cellular activities (AAA)
4956435043474747382ABC transporter
4444444432ATP synthase alpha/beta family, nucleotide-binding domain
1414141414141415113Elongation factor Tu GTP binding domain
131410610910880Helix-loop-helix DNA-binding domain
2223232420Hsp20/alpha crystallin family
8878777961Hsp70 protein
81088899868KH domain
11111117SH2 domain
2724261924252514184SH3 domain
9101089991074Actin
172131667359848620691Ankyrin repeat
273122421PAN domain
7787788860ADP-ribosylation factor family
2227171915171617150Eukaryotic aspartyl protease
4443444431Cyclic nucleotide-binding domain
11114Cytochrome b(C-terminal)/b6/petD
112Cytochrome b/b6/petB
111111118Cytochrome c
112Double-stranded RNA binding motif
171719171918181126EF hand
111211184Fe-4S binding domain
2222222115Fibronectin type III domain
2222233218Globin
2020152318181810142Glutathione S-transferase, C-terminal domain
211111119Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
8781786550Homeodomain
3222222217lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
4445444433Myosin head (motor domain)
2382311181921371611601201,357Cytochrome P450
181120113961151271241331,009Protein kinase domain
1926171713131415134Pyridine nucleotide-disulphide oxidoreductase
2827252326252526205Ras family
1322131113121222118Response regulator receiver domain
129210454147RNase H
6063595461616056474RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Retroviral aspartyl protease
22Reverse transcriptase (RNA-dependent DNA polymerase)
2322222318Copper/zinc superoxide dismutase (SODC)
2323222218Iron/manganese superoxide dismutases, alpha-hairpin domain
1732203119202128188Subtilase family
59875989626869109602Sugar (and other) transporter
131411121113121399Thioredoxin
42252341032Trypsin
5544455436Tubulin/FtsZ family, GTPase domain
5243444127von Willebrand factor type A domain
9178632565676329481Zinc finger, C2H2 type
544843254249455311Zinc finger, C3HC4 type (RING finger)
1011116768564Zinc knuckle
2222222216Protein-tyrosine phosphatase
2001911472261721651691251,395short chain dehydrogenase
99816311766697054619Zinc-binding dehydrogenase
6555555743Thiolase, N-terminal domain
6954284132373618315Beta-ketoacyl synthase, N-terminal domain
76867775532Fe-2S iron-sulfur cluster binding domain
112Papain family cysteine protease
111111118Enolase, C-terminal TIM barrel domain
1214Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
119888881070Glutamine amidotransferase class-I
10101091010101079TCP-1/cpn60 chaperonin family
4344355331Glutamine synthetase, catalytic domain
2222222216Triosephosphate isomerase
1520181515181924144E1-E2 ATPase
128878881069Core histone H2A/H2B/H3/H4
112Copper binding proteins, plastocyanin/azurin family
6844444640Alpha amylase, catalytic domain
2221322216Phorbol esters/diacylglycerol binding domain (C1 domain)
7777977859Bacterial transferase hexapeptide (six repeats)
4335433530tRNA synthetases class I (I, L, M and V)
10765666854Cyclin, N-terminal domain
2734191913191828177Carboxylesterase family
4444444432DNA polymerase family B
6657455543ATP synthase subunit C
5958766854Peroxidase
181310131413137101Beta-lactamase
4434233225C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
2830262325262425207Calcineurin-like phosphoesterase
101812169131315106Cellulase (glycosyl hydrolase family 5)
8786888760tRNA synthetases class II (D, K and N)
3840384039393939312Mitochondrial carrier protein
1113recA bacterial DNA recombination protein
1918161616151521136Aminotransferase class I and II
81187977461Phosphoribosyl transferase domain
101010101010101181Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11226Ribosome inactivating protein
111111118Phosphoglycerate kinase
2222222216Ribosomal protein S4/S9 N-terminal domain
2222222216Ribosomal protein S12/S23
111115Bacterial regulatory helix-turn-helix proteins, AraC family
111111118Chaperonin 10 Kd subunit
1316121213121211101C2 domain
181919161718188133PH domain
11131061210102395bZIP transcription factor
2021183318181837183Aldehyde dehydrogenase family
232236170391791951862591,496Fungal Zn(2)-Cys(6) binuclear cluster domain
2529232324242427199Cytochrome b5-like Heme/Steroid binding domain
4442333528Oxidoreductase molybdopterin binding domain
1720181917201815144Oxidoreductase NAD-binding domain
3334262426313125230SNF2 family N-terminal domain
2221222215Ribosomal protein S7p/S5e
2323211922212122172Ubiquitin-conjugating enzyme
7668666853Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
111111118Hsp90 protein
2222222216Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
54634661246Chitin recognition protein
2432333626Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
4344344430Cupin
2232333119Annexin
111111118Eukaryotic-type carbonic anhydrase
2211111211Chalcone and stilbene synthases, N-terminal domain
33323333232-oxoacid dehydrogenases acyltransferase (catalytic domain)
5372688544Catalase
111111118Disintegrin
131111614UDP-glucoronosyl and UDP-glucosyl transferase
997126671268Aminotransferase class-III
2222233218Ribosomal protein S19
111111118DNA gyrase B
7547445743Thiamine pyrophosphate enzyme, central domain
4434333529Lyase
2223222217Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1113Sodium:neurotransmitter symporter family
111111118Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
1411111111Orotidine 5'-phosphate decarboxylase / HUMPS family
111111118Indole-3-glycerol phosphate synthase
2212222114Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
121312141012121499Kinesin motor domain
3128262831303024228DnaJ domain
1414141414141414112Proteasome subunit
21146422435Major intrinsic protein
111111118ATP synthase
1213222417Glycosyl hydrolase family 1
1111111183'5'-cyclic nucleotide phosphodiesterase
111111118Profilin
111111129Ribosomal protein L22p/L17e
2222222216Ribosomal protein L14p/L23e
1110998108772Ubiquitin family
5555555540Cofilin/tropomyosin-type actin-binding protein
222222231714-3-3 protein
5557455440Alkaline phosphatase
6555555743Zinc carboxypeptidase
3936344635363532293Aldo/keto reductase family
151812131317177112Myb-like DNA-binding domain
8443444435Forkhead domain
2312111314Glycosyl hydrolases family 32 N-terminal domain
11111128Ribosomal protein L16p/L10e
3222222217Ribosomal protein S14p/S29e
4333333325FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
322212214
8977777658Flavodoxin
111111118Calreticulin family
14391210108826127Common central domain of tyrosinase
119116111111979Aminotransferase class-V
111111118Ribonucleotide reductase, small chain
4141454142414244337DEAD/DEAH box helicase
9382787974798073638Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222216Ribosomal protein L23
121111119Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1222211112Ribosomal protein L5
7666666952Pyridoxal-dependent decarboxylase conserved domain
8635333435Citrate synthase, C-terminal domain
5555555641GHMP kinases N terminal domain
8875666854Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
101111111212121190Pyridoxal-phosphate dependent enzyme
2420191621201921160NUDIX domain
7665565444pfkB family carbohydrate kinase
7537433335Glycosyl hydrolases family 28
121222212Luciferase-like monooxygenase
2222222216Ribosomal protein L3
2222222216Ribosomal protein L11, RNA binding domain
1819161118171814131Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
42411113Lipoxygenase
4444444432ATP synthase alpha/beta chain, C terminal domain
5545555539Calponin homology (CH) domain
5644456337Glutamine amidotransferases class-II
2212222215Ribosomal protein S15
221111210Thaumatin family
2222222216Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
2212222215Ribosomal protein S2
3222222217SRF-type transcription factor (DNA-binding and dimerisation domain)
61162666952GATA zinc finger
3450333438373717280Amino acid permease
6754555744Prolyl oligopeptidase family
2222222216Ribosomal protein L30p/L7e
6111091198872Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6555444639Aconitase family (aconitate hydratase)
3935233432Glycosyl hydrolase family 10
434545429Glycosyl hydrolases family 17
2222222216Ribosomal protein S5, N-terminal domain
111111118Nucleoside diphosphate kinase
22Tetraspanin family
111111129Ribosomal protein S10p/S20e
3432322322Arrestin (or S-antigen), N-terminal domain
111211119Phosphoglucose isomerase
111111118Carbohydrate phosphorylase
111111118SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
10635333437Polyprenyl synthetase
4754555540Hexokinase
111281091091887Dynamin family
3112111111Transcription factor TFIID (or TATA-binding protein, TBP)
7564566847Rieske [2Fe-2S] domain
11125Phytochrome region
3328Proton-conducting membrane transporter
910958881067Biotin-requiring enzyme
111111118Phosphofructokinase
1122222113Ribosomal protein S17
111111118Hydroxymethylglutaryl-coenzyme A reductase
3333433325FGGY family of carbohydrate kinases, N-terminal domain
112Sodium:dicarboxylate symporter family
16118999101890Enoyl-CoA hydratase/isomerase
2222222216Ribosomal protein S9/S16
2322222318Transcription factor TFIIB repeat
81288899668Cytidine and deoxycytidylate deaminase zinc-binding region
111111129Molybdopterin oxidoreductase
12896767964Chromo (CHRromatin Organisation MOdifier) domain
4744444536Phosphatidylinositol-specific phospholipase C, Y domain
5855555644Phosphatidylinositol-specific phospholipase C, X domain
8109118771070D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2222222216Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
22222222166-phosphogluconate dehydrogenase, C-terminal domain
14178108991489Multicopper oxidase
11101081010101180WW domain
1111122211Ribosomal RNA adenine dimethylase
111111118Yeast PIR protein repeat
12210510393106109108108854WD domain, G-beta repeat
4645366640Heavy-metal-associated domain
5533333631Adenylate kinase
2121222214Phosphoglucomutase/phosphomannomutase, C-terminal domain
1211122212Ribosomal protein S8
2221222215Ribosomal protein S11
4442344429LIM domain
11114Matrixin
2223334221Regulator of chromosome condensation (RCC1) repeat
2222222216Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
3323222320chorismate binding enzyme
333333332460s Acidic ribosomal protein
4843444435Prenyltransferase and squalene oxidase repeat
6666666446Protein kinase C terminal domain
111111118Single-strand binding protein family
11Type II/IV secretion system protein
111111118S-adenosylmethionine synthetase, N-terminal domain
91087988867Bromodomain
12126108991480Acyl-CoA dehydrogenase, C-terminal domain
1415141114141413109Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
4422222321Ribonuclease T2 family
3333333324HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
111111118Urease alpha-subunit, N-terminal domain
10159149881184Serine carboxypeptidase
11Apoptosis regulator proteins, Bcl-2 family
8888888864Phosphatidylinositol 3- and 4-kinase
1213211213Transketolase, thiamine diphosphate binding domain
10732222331Glycosyl hydrolases family 11
4534333530Inositol monophosphatase family
4444444432Glutaredoxin
5656444337Isocitrate lyase family
2222222216Serine hydroxymethyltransferase
2243444225Iron-containing alcohol dehydrogenase
2222222216Ribosomal protein L10
4343344227KOW motif
11114Ribosomal protein L34
3332233322RF-1 domain
2333444326Sodium:solute symporter family
111111118Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
111111118IMP dehydrogenase / GMP reductase domain
111111118Glucose-6-phosphate dehydrogenase, NAD binding domain
7967666653Protein phosphatase 2C
2222222216Nucleotidyl transferase
6334233226Carbonic anhydrase
11111139Phosphoribulokinase / Uridine kinase family
71058565854Fatty acid desaturase
6666666648MutS domain V
111111118Delta-aminolevulinic acid dehydratase
5445444434Arginase family
6666666648MCM P-loop domain
2222212316Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 5 Middle
981071011101075FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
7970434840454652423AMP-binding enzyme
5533434330G-protein alpha subunit
1910814788983HMG (high mobility group) box
112NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
101710710991890His Kinase A (phospho-acceptor) domain
3233333323Armadillo/beta-catenin-like repeat
3221262228272610192Tetratricopeptide repeat
3242444225Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
101399111111781BRCA1 C Terminus (BRCT) domain
6665666647Glycosyl transferases group 1
4331544226Glycosyl transferase family 2
11111128SAM domain (Sterile alpha motif)
111111118linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
7217211223Pectate lyase
4532333225ribonuclease
111111118Urease, gamma subunit
4444444432CoA-ligase
6052203520343325279Phosphopantetheine attachment site
3333332323Formyl transferase
91091111991179Metallopeptidase family M24
131415121616161103Leucine Rich Repeat
5751385748505111363alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
4444433430PB1 domain
2222222216Staphylococcal nuclease homologue
910999991276Rab-GTPase-TBC domain
111111118Tudor domain
11111117WH1 domain
4432333325Zinc finger, ZZ type
2221333218HRDC domain
99881099668CBS domain
2222222216Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
4456445335S1 RNA binding domain
111111118HIUase/Transthyretin family
5453466336AhpC/TSA family
4444444432tRNA synthetases class I (W and Y)
11111128UvrD/REP helicase N-terminal domain
5573755845Rhodanese-like domain
2221222215Universal stress protein family
5655414438404039353Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
8888888763tRNA synthetase class II core domain (G, H, P, S and T)
111111118SpoU rRNA Methylase family
2222222216Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
11121118PDZ domain
5636333635Class II Aldolase and Adducin N-terminal domain
4443444431Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
5555454538Fes/CIP4, and EFC/F-BAR homology domain
5544555336IQ calmodulin-binding motif
2221222215Phosphoinositide 3-kinase family, accessory domain (PIK domain)
5654556238Phospholipase D Active site motif
1111111512Regulator of G protein signaling domain
4444444432GTPase-activator protein for Ras-like GTPase
4434444431RasGEF domain
4433444430RasGEF N-terminal motif
10997899970RhoGAP domain
6664666646RhoGEF domain
3334343427SPRY domain
3333333324RNA polymerase Rpb1, domain 2
3222222217Guanylate kinase
5544544435Gelsolin repeat
6767765650UBA/TS-N domain
1717171117171712125PHD-finger
111111118GGL domain
6666666648HECT-domain (ubiquitin-transferase)
2222122114Helix-hairpin-helix motif
111111118MSP (Major sperm protein) domain
5546545337Ribonuclease III domain
2222222418Region in Clathrin and VPS
3323232321RanBP1 domain
2321222216PPIC-type PPIASE domain
3342133221Zn-finger in Ran binding protein and others
181917111317188121Zinc finger C-x8-C-x5-C-x3-H type (and similar)
4331333323Poly(ADP-ribose) polymerase catalytic domain
111111118Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
5990664569666519479F-box domain
111111118Elongation factor 1 gamma, conserved domain
4543444432Calpain family cysteine protease
122222213Copper fist DNA binding domain
8654555644CRAL/TRIO domain
1010396761768BTB/POZ domain
2221443321Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
3333333324Voltage gated chloride channel
8352466236Caspase domain
181815141314154111GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
2930222522232319193ABC transporter transmembrane region
11Integrase core domain
6878777858FAD binding domain
34229106111112115Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111111118HAMP domain
2222222216ribosomal L5P family C-terminus
5655555743Insulinase (Peptidase family M16)
3332333323Dehydrogenase E1 component
111111118Lumazine binding domain
5666666647Elongation factor G C-terminus
5663444739HMGL-like
4444444432DnaJ central domain
22Sulfotransferase domain
3121233217Starch binding domain
2332322320Ribosomal protein L1p/L10e family
79896771467Cation transporting ATPase, C-terminus
9121110910101485Cation transporter/ATPase, N-terminus
111111118dUTPase
6554444638Aconitase C-terminal domain
4343444329Amino acid kinase family
111111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
6656283928383917311Acyl transferase domain
111111118Urease beta subunit
6859555750Dihydrodipicolinate synthetase family
3541353936383820282haloacid dehalogenase-like hydrolase
88677971163Glycosyl hydrolases family 2
2419162517171625159Glycosyl hydrolases family 18
111111118Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
111111118Acylphosphatase
3122122114Adenylosuccinate synthetase
1214222216Asparaginase, N-terminal
3333233323Peptidase S24-like
1311111211Inorganic pyrophosphatase
1412131511121314104Glycosyl hydrolases family 16
3222222217Glycosyl hydrolases family 15
10119127881378NADH:flavin oxidoreductase / NADH oxidase family
13131112133-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3333222220Glycosyl hydrolase family 20, catalytic domain
5645566643HhH-GPD superfamily base excision DNA repair protein
111111118AIR carboxylase
3444284435343521275GMC oxidoreductase
3421222218Asparagine synthase
2231653871698Fungal cellulose binding domain
5655555743Septin
121111119EF-1 guanine nucleotide exchange domain
111111118Homoserine dehydrogenase
3133635630Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
5334333327tRNA synthetases class I (E and Q), catalytic domain
3312222217tRNA synthetases class I (R)
4544444433XPG N-terminal domain
12177141012121296Metallo-beta-lactamase superfamily
11121118F5/8 type C domain
4424222424Choline/Carnitine o-acyltransferase
2321322217Putative esterase
1