PFAM Domains • Ustilaginales
Annotations/GenomesMoeaph1Psean1_1Psehu1Spore1Tescy1Usthor1Ustma2_2TotalAnnotation Description
PFAMs
6,4445,9785,8525,9005,5157,1487,19444,031
111111177 transmembrane receptor (rhodopsin family)
24312929292729198ATPase family associated with various cellular activities (AAA)
33373734233039233ABC transporter
444444428ATP synthase alpha/beta family, nucleotide-binding domain
1413141414141598Elongation factor Tu GTP binding domain
713131213101179Helix-loop-helix DNA-binding domain
11112118Hsp20/alpha crystallin family
577787748Hsp70 protein
578877850KH domain
11114SH2 domain
11222223221616132SH3 domain
101091011101070Actin
4171616153273Ankyrin repeat
878878854ADP-ribosylation factor family
998878958Eukaryotic aspartyl protease
233333320Cyclic nucleotide-binding domain
11111117Cytochrome c
122322113Double-stranded RNA binding motif
1171616191171EF hand
1222111104Fe-4S binding domain
11125Fibronectin type III domain
477682438Glutathione S-transferase, C-terminal domain
11111128Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
355665535Homeodomain
22222212lactate/malate dehydrogenase, NAD binding domain
344444427Myosin head (motor domain)
19181815111420115Cytochrome P450
78929392899595634Protein kinase domain
1216171413121599Pyridine nucleotide-disulphide oxidoreductase
26242224222525168Ras family
91112119111174Response regulator receiver domain
112511314RNase H
44586061575054384RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Retroviral aspartyl protease
31333444Reverse transcriptase (RNA-dependent DNA polymerase)
222222214Iron/manganese superoxide dismutases, alpha-hairpin domain
443445529Subtilase family
39403027242524209Sugar (and other) transporter
101010107101067Thioredoxin
344444427Tubulin/FtsZ family, GTPase domain
11215von Willebrand factor type A domain
12333030331310161Zinc finger, C2H2 type
63736393177163Zinc finger, C3HC4 type (RING finger)
6131014926785Zinc knuckle
222222214Protein-tyrosine phosphatase
42454845393539293short chain dehydrogenase
28273025222021173Zinc-binding dehydrogenase
566666641Thiolase, N-terminal domain
464333528Beta-ketoacyl synthase, N-terminal domain
3534422232Fe-2S iron-sulfur cluster binding domain
11111117Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
277777744Glutamine amidotransferase class-I
10109910101068TCP-1/cpn60 chaperonin family
222222214Glutamine synthetase, catalytic domain
222222214Triosephosphate isomerase
15161314121718105E1-E2 ATPase
667787748Core histone H2A/H2B/H3/H4
254423424Alpha amylase, catalytic domain
455555534Phorbol esters/diacylglycerol binding domain (C1 domain)
655545636Bacterial transferase hexapeptide (six repeats)
433334424tRNA synthetases class I (I, L, M and V)
81069991061Cyclin, N-terminal domain
899968857Carboxylesterase family
444444428DNA polymerase family B
22222212ATP synthase subunit C
333323320Peroxidase
22212211Beta-lactamase
22222212C-5 cytosine-specific DNA methylase
17242122201720141Calcineurin-like phosphoesterase
104756101153Cellulase (glycosyl hydrolase family 5)
456666639tRNA synthetases class II (D, K and N)
34363736393537254Mitochondrial carrier protein
1314151313141496Aminotransferase class I and II
377784440Phosphoribosyl transferase domain
911101010111172Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
11111117Chaperonin 10 Kd subunit
8111112129972C2 domain
8181817201112104PH domain
106774101155bZIP transcription factor
14161614131618107Aldehyde dehydrogenase family
721019387766475568Fungal Zn(2)-Cys(6) binuclear cluster domain
16181817181718122Cytochrome b5-like Heme/Steroid binding domain
222222214Oxidoreductase molybdopterin binding domain
667776847Oxidoreductase NAD-binding domain
18181919191917129SNF2 family N-terminal domain
222222214Ribosomal protein S7p/S5e
17181818181818125Ubiquitin-conjugating enzyme
587878851Isocitrate/isopropylmalate dehydrogenase
112222212Ribosomal Proteins L2, RNA binding domain
11111117Hsp90 protein
122222213Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
222222214Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
112Cupin
1111116Annexin
2333333202-oxoacid dehydrogenases acyltransferase (catalytic domain)
1113Catalase
11111117Disintegrin
112UDP-glucoronosyl and UDP-glucosyl transferase
555555535Aminotransferase class-III
212222213Ribosomal protein S19
11111117DNA gyrase B
222212213Thiamine pyrophosphate enzyme, central domain
334333423Lyase
222222214Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111116Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
11111128Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
691010991063Kinesin motor domain
26282727272827190DnaJ domain
1415141414141499Proteasome subunit
456545534Major intrinsic protein
11111117ATP synthase
11114Glycosyl hydrolase family 1
1111116Profilin
232222215Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
6119101091267Ubiquitin family
243444425Cofilin/tropomyosin-type actin-binding protein
1111111714-3-3 protein
244441221Alkaline phosphatase
11111117Zinc carboxypeptidase
19171615121515109Aldo/keto reductase family
31010975751Myb-like DNA-binding domain
355445531Forkhead domain
222223215Glycosyl hydrolases family 32 N-terminal domain
211112210Ribosomal protein L16p/L10e
111222211Ribosomal protein S14p/S29e
133333319FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
12227
124443321Flavodoxin
1111116Calreticulin family
323112214Common central domain of tyrosinase
786777850Aminotransferase class-V
11111117Ribonucleotide reductase, small chain
38404040394548290DEAD/DEAH box helicase
57686769656565456Helicase conserved C-terminal domain
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
211112210Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111117Ribosomal protein L5
434445529Pyridoxal-dependent decarboxylase conserved domain
11111229Citrate synthase, C-terminal domain
555555535GHMP kinases N terminal domain
587767747Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
71199981063Pyridoxal-phosphate dependent enzyme
1111121210121280NUDIX domain
334333423pfkB family carbohydrate kinase
1122118Glycosyl hydrolases family 28
1113Luciferase-like monooxygenase
222222214Ribosomal protein L3
222222214Ribosomal protein L11, RNA binding domain
91091010101068Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
444444428ATP synthase alpha/beta chain, C terminal domain
545555534Calponin homology (CH) domain
365563331Glutamine amidotransferases class-II
222222214Ribosomal protein S15
11Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222222214Ribosomal protein S2
222222214SRF-type transcription factor (DNA-binding and dimerisation domain)
97101010101066GATA zinc finger
91917199101093Amino acid permease
433333423Prolyl oligopeptidase family
211222212Ribosomal protein L30p/L7e
899868957Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
444444428Aconitase family (aconitate hydratase)
222212213Glycosyl hydrolase family 10
222211212Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
332333320Nucleoside diphosphate kinase
211112210Ribosomal protein S10p/S20e
2211219Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
11111117SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
221222213Ribosomal protein L6
333333321Polyprenyl synthetase
222222214Hexokinase
333335424Dynamin family
11111117Transcription factor TFIID (or TATA-binding protein, TBP)
243433322Rieske [2Fe-2S] domain
112Phytochrome region
7109989961Biotin-requiring enzyme
11111117Phosphofructokinase
222222214Ribosomal protein S17
11111117Hydroxymethylglutaryl-coenzyme A reductase
223233217FGGY family of carbohydrate kinases, N-terminal domain
1211111210101278Enoyl-CoA hydratase/isomerase
232222215Ribosomal protein S9/S16
222222214Transcription factor TFIIB repeat
577754641Cytidine and deoxycytidylate deaminase zinc-binding region
1111116Molybdopterin oxidoreductase
5757720253Chromo (CHRromatin Organisation MOdifier) domain
222222214Phosphatidylinositol-specific phospholipase C, Y domain
322222316Phosphatidylinositol-specific phospholipase C, X domain
567656641D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
11111117Malic enzyme, N-terminal domain
111111176-phosphogluconate dehydrogenase, C-terminal domain
665655639Multicopper oxidase
786896751WW domain
232222215Ribosomal RNA adenine dimethylase
861021041031019799692WD domain, G-beta repeat
332323319Heavy-metal-associated domain
323333320Adenylate kinase
311133315Phosphoglucomutase/phosphomannomutase, C-terminal domain
222222214Ribosomal protein S8
222222214Ribosomal protein S11
566666540LIM domain
422214318Regulator of chromosome condensation (RCC1) repeat
122222213Ribosomal protein S13/S18
122222213chorismate binding enzyme
13332331860s Acidic ribosomal protein
445444429Prenyltransferase and squalene oxidase repeat
256664433Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
101091010111171Bromodomain
1111111111111177Acyl-CoA dehydrogenase, C-terminal domain
1213131313131390Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
222222214Ribonuclease T2 family
455555433HSF-type DNA-binding
122222213SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
666646640Serine carboxypeptidase
688878752Phosphatidylinositol 3- and 4-kinase
221121110Transketolase, thiamine diphosphate binding domain
111115Glycosyl hydrolases family 11
11WHEP-TRS domain
222222214Inositol monophosphatase family
444444428Glutaredoxin
233322217Isocitrate lyase family
11111117Serine hydroxymethyltransferase
222231214Iron-containing alcohol dehydrogenase
223332318Ribosomal protein L10
244553427KOW motif
1111116Ribosomal protein L34
111115Ribosomal protein L33
332213317RF-1 domain
444423425Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
455555534Protein phosphatase 2C
122212212Nucleotidyl transferase
11111117Carbonic anhydrase
211112210Phosphoribulokinase / Uridine kinase family
344444427Fatty acid desaturase
566666641MutS domain V
1111116Delta-aminolevulinic acid dehydratase
222122213Arginase family
566666641MCM P-loop domain
322223317Squalene/phytoene synthase
456656638FHA domain
25282725222730184AMP-binding enzyme
344434426G-protein alpha subunit
888888856HMG (high mobility group) box
566645537His Kinase A (phospho-acceptor) domain
332233420Armadillo/beta-catenin-like repeat
72324232178113Tetratricopeptide repeat
11Envelope glycoprotein GP120
222332216Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
255572329BRCA1 C Terminus (BRCT) domain
244454427Glycosyl transferases group 1
233322217Glycosyl transferase family 2
111115SAM domain (Sterile alpha motif)
1111116linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
11112118Pectate lyase
222112111ribonuclease
11111117Urease, gamma subunit
555555535CoA-ligase
91198891266Phosphopantetheine attachment site
444444428Formyl transferase
766667745Metallopeptidase family M24
1141615131464Leucine Rich Repeat
52527232354112alpha/beta hydrolase fold
334333322RNA polymerase Rpb2, domain 6
222222214PB1 domain
122222213Staphylococcal nuclease homologue
128888131370Rab-GTPase-TBC domain
12111219Tudor domain
1111116WH1 domain
22222212Zinc finger, ZZ type
22111119HRDC domain
488876546CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
1113Clp protease
243434424S1 RNA binding domain
1111116HIUase/Transthyretin family
333343322AhpC/TSA family
444444428tRNA synthetases class I (W and Y)
212212212UvrD/REP helicase N-terminal domain
643346632Rhodanese-like domain
332333320Universal stress protein family
14191818191315116Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
799987756tRNA synthetase class II core domain (G, H, P, S and T)
222222214Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
11PDZ domain
222222214Class II Aldolase and Adducin N-terminal domain
222222214Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
443434426Fes/CIP4, and EFC/F-BAR homology domain
333323320IQ calmodulin-binding motif
122222213Phosphoinositide 3-kinase family, accessory domain (PIK domain)
132331114Phospholipase D Active site motif
311113313Regulator of G protein signaling domain
444444428GTPase-activator protein for Ras-like GTPase
545555534RasGEF domain
455554533RasGEF N-terminal motif
811121112101074RhoGAP domain
101213129131281RhoGEF domain
221222112SPRY domain
334333322RNA polymerase Rpb1, domain 2
11111117Guanylate kinase
233332218Gelsolin repeat
378966645UBA/TS-N domain
1216161614131299PHD-finger
1111116GGL domain
455555534HECT-domain (ubiquitin-transferase)
232211112Helix-hairpin-helix motif
111115BRCA2 repeat
111115MSP (Major sperm protein) domain
333433221Ribonuclease III domain
322223418Region in Clathrin and VPS
333333321RanBP1 domain
11111117PPIC-type PPIASE domain
112121210Zn-finger in Ran binding protein and others
916161717101095Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
220212116282F-box domain
11111117Elongation factor 1 gamma, conserved domain
11111117Calpain family cysteine protease
11111117Copper fist DNA binding domain
687888853CRAL/TRIO domain
555556536BTB/POZ domain
11111117Inhibitor of Apoptosis domain
222232215Voltage gated chloride channel
11111117Caspase domain
11GDSL-like Lipase/Acylhydrolase
11111229Poly-adenylate binding protein, unique domain
11111117POLO box duplicated region
1518181691420110ABC transporter transmembrane region
61364Integrase core domain
223333319FAD binding domain
254324323Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111117HAMP domain
21111219ribosomal L5P family C-terminus
556555536Insulinase (Peptidase family M16)
233333320Dehydrogenase E1 component
11111117Lumazine binding domain
656666641Elongation factor G C-terminus
344444427HMGL-like
444444428DnaJ central domain
322223317Ribosomal protein L1p/L10e family
777767748Cation transporting ATPase, C-terminus
10109107101167Cation transporter/ATPase, N-terminus
1111116dUTPase
444444428Aconitase C-terminal domain
333333321Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
354333526Acyl transferase domain
11111117Urease beta subunit
331111111Dihydrodipicolinate synthetase family
12262327241313138haloacid dehalogenase-like hydrolase
1113Glycosyl hydrolases family 2
322223317Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
112Translation initiation factor IF-3, C-terminal domain
11111117Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
121313314Peptidase S24-like
11111117Inorganic pyrophosphatase
7676231243Glycosyl hydrolases family 16
11111117Glycosyl hydrolases family 15
233333320NADH:flavin oxidoreductase / NADH oxidase family
3322322173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
222232215Glycosyl hydrolase family 20, catalytic domain
666645538HhH-GPD superfamily base excision DNA repair protein
1111116AIR carboxylase
1110109781065GMC oxidoreductase
222222214Asparagine synthase
444444428Septin
11111117EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
322112314Flavin-binding monooxygenase-like
333333321tRNA synthetases class I (E and Q), catalytic domain
11111117tRNA synthetases class I (R)
465667640XPG N-terminal domain
668874443Metallo-beta-lactamase superfamily
112F5/8 type C domain
333333321Choline/Carnitine o-acyltransferase
11111117Putative esterase
1111116Glycosyl hydrolase family 9
11111117Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11111117Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
233333320RNB domain
334232320Dioxygenase
222323216CNH domain
122222213Diacylglycerol kinase catalytic domain
477776644Dual specificity phosphatase, catalytic domain
11MyTH4 domain
244443425P21-Rho-binding domain
1312111211131385PX domain
133333319Ras association (RalGDS/AF-6) domain
444453428UBX domain
455555534VHS domain
11111117Phosphoinositide 3-kinase C2
222222214DAHP synthetase I family
665655639Carbon-nitrogen hydrolase
1111116N-acetyltransferase
11111117Prephenate dehydratase
244433323Syntaxin
344555430Pumilio-family RNA binding repeat
566656640Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
11111117ER lumen protein retaining receptor
222222214Glycoprotease family
11112118Histidinol dehydrogenase
444444428impB/mucB/samB family
11114
11111117Ribosomal L15
311113313Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11114Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
11111117Ribosomal L29 protein
111115Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
11111117RNA pseudouridylate synthase
567666642Histone deacetylase domain
1111116POT family
222222214PWWP domain
9101087111166SET domain
1112117Isochorismatase family
333322319Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
446557637XPG I-region
11114Acetokinase family
433333423DNA photolyase
1113Nitroreductase family
1111116Cytosol aminopeptidase family, catalytic domain
22211210Sulfatase
111111176,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
222222214Acyl CoA binding protein
444444428Cullin family
11111117Elongation factor TS
243342220FAD binding domain
1113O-methyltransferase domain
334324322EamA-like transporter family
22228
888887754ThiF family
11111117Ribosomal family S4e
122231112Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
222232215Ammonium Transporter Family
222222214Sulfate permease family
11111117MATH domain
222222214Dehydratase family
443223321Transaldolase/Fructose-6-phosphate aldolase
333333321Mechanosensitive ion channel
211112210GTP cyclohydrolase II
111111173,4-dihydroxy-2-butanone 4-phosphate synthase
344444427Adaptor complexes medium subunit family
454555533Exonuclease
1111111