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PFAM Domains • Plectosphaerella cucumerina RP01 v1.0
Annotations/GenomesAcral2Plecu1Plecuc1Sodal1Veral1Verda1TotalAnnotation Description
PFAMs
6,7189,94012,2216,7657,4658,09351,202
11137 transmembrane receptor (rhodopsin family)
337 transmembrane receptor (Secretin family)
375955413541268ATPase family associated with various cellular activities (AAA)
345654324947272ABC transporter
44444424ATP synthase alpha/beta family, nucleotide-binding domain
14141514121483Elongation factor Tu GTP binding domain
912111051360Helix-loop-helix DNA-binding domain
23221212Hsp20/alpha crystallin family
71111791055Hsp70 protein
99897951KH domain
112Ribulose bisphosphate carboxylase large chain, catalytic domain
111115SH2 domain
232514252121129SH3 domain
109101081057Actin
307727326374303Ankyrin repeat
1761116PAN domain
78877845ADP-ribosylation factor family
821229151590Eukaryotic aspartyl protease
44444323Cyclic nucleotide-binding domain
1111116Cytochrome c
2114Double-stranded RNA binding motif
1818216141684EF hand
1111264Fe-4S binding domain
24122314Fibronectin type III domain
22222212Globin
1012984548Glutathione S-transferase, C-terminal domain
2112118Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
5105691146Homeodomain
35342320lactate/malate dehydrogenase, NAD binding domain
54445527Myosin head (motor domain)
529486496765413Cytochrome P450
11510412010198113651Protein kinase domain
10181811121584Pyridine nucleotide-disulphide oxidoreductase
212324212124134Ras family
12171812151690Response regulator receiver domain
3131210RNase H
586053604954334RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
12312211Copper/zinc superoxide dismutase (SODC)
33433319Iron/manganese superoxide dismutases, alpha-hairpin domain
7384492018136Subtilase family
29146161289293549Sugar (and other) transporter
11131210101167Thioredoxin
14311313Trypsin
45544527Tubulin/FtsZ family, GTPase domain
3413314von Willebrand factor type A domain
507332474352297Zinc finger, C2H2 type
37446413540203Zinc finger, C3HC4 type (RING finger)
610347636Zinc knuckle
22222212Protein-tyrosine phosphatase
571671477788102638short chain dehydrogenase
377859345056314Zinc-binding dehydrogenase
57957740Thiolase, N-terminal domain
167816121170Beta-ketoacyl synthase, N-terminal domain
564544282Fe-2S iron-sulfur cluster binding domain
1111116Enolase, C-terminal TIM barrel domain
8111286853Glutamine amidotransferase class-I
10101010101060TCP-1/cpn60 chaperonin family
11ATP synthase A chain
34435524Glutamine synthetase, catalytic domain
22222212Triosephosphate isomerase
192426191818124E1-E2 ATPase
99985848Core histone H2A/H2B/H3/H4
38947738Alpha amylase, catalytic domain
22222212Phorbol esters/diacylglycerol binding domain (C1 domain)
9988121561Bacterial transferase hexapeptide (six repeats)
43543322tRNA synthetases class I (I, L, M and V)
661166843Cyclin, N-terminal domain
2363322119113Carboxylesterase family
44444424DNA polymerase family B
45565530ATP synthase subunit C
46756735Peroxidase
10128737Beta-lactamase
33232316C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
262722242327149Calcineurin-like phosphoesterase
31418481158Cellulase (glycosyl hydrolase family 5)
77777742tRNA synthetases class II (D, K and N)
364239353639227Mitochondrial carrier protein
11recA bacterial DNA recombination protein
152627161719120Aminotransferase class I and II
89575741Phosphoribosyl transferase domain
1010101091059Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
1111116Chaperonin 10 Kd subunit
1111101161463C2 domain
1716815141484PH domain
1112181061471bZIP transcription factor
113733122522140Aldehyde dehydrogenase family
873634021001461671,265Fungal Zn(2)-Cys(6) binuclear cluster domain
243131212224153Cytochrome b5-like Heme/Steroid binding domain
24523420Oxidoreductase molybdopterin binding domain
12221710111890Oxidoreductase NAD-binding domain
222624232123139SNF2 family N-terminal domain
22222212Ribosomal protein S7p/S5e
201921201820118Ubiquitin-conjugating enzyme
591057743Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
1111116Hsp90 protein
22222212Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
54634325Chitin recognition protein
15424420Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
665623Cupin
33233317Annexin
13413214Eukaryotic-type carbonic anhydrase
211116Chalcone and stilbene synthases, N-terminal domain
354333212-oxoacid dehydrogenases acyltransferase (catalytic domain)
27634527Catalase
1221118Disintegrin
121332223UDP-glucoronosyl and UDP-glucosyl transferase
7121179955Aminotransferase class-III
22222212Ribosomal protein S19
1111116DNA gyrase B
36636630Thiamine pyrophosphate enzyme, central domain
37635529Lyase
2222210Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
23423418Sodium:neurotransmitter symporter family
11Ferritin-like domain
111115Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
133119Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
111227Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
10111010121164Kinesin motor domain
252628252226152DnaJ domain
14141414141383Proteasome subunit
26624323Major intrinsic protein
1111116ATP synthase
17514321Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
1121117Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
12111099960Ubiquitin family
55553528Cofilin/tropomyosin-type actin-binding protein
2232221314-3-3 protein
36445527Alkaline phosphatase
619189151582Zinc carboxypeptidase
174237183633183Aldo/keto reductase family
1313414101468Myb-like DNA-binding domain
44444424Forkhead domain
3313313Glycosyl hydrolases family 32 N-terminal domain
112116Ribosomal protein L16p/L10e
22222212Ribosomal protein S14p/S29e
33334319FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
211228
57656635Flavodoxin
111115Calreticulin family
4161647653Common central domain of tyrosinase
691077746Aminotransferase class-V
1111116Ribonucleotide reductase, small chain
393941373639231DEAD/DEAH box helicase
717068676470410Helicase conserved C-terminal domain
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212Ribosomal protein L23
111115Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111116Ribosomal protein L5
35534626Pyridoxal-dependent decarboxylase conserved domain
23422215Citrate synthase, C-terminal domain
55555530GHMP kinases N terminal domain
57754634Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
10141410111372Pyridoxal-phosphate dependent enzyme
16191815111493NUDIX domain
46556632pfkB family carbohydrate kinase
19101121144Glycosyl hydrolases family 28
1719Luciferase-like monooxygenase
22222212Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
11161510141581Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
112Lipoxygenase
44444424ATP synthase alpha/beta chain, C terminal domain
55555530Calponin homology (CH) domain
64364528Glutamine amidotransferases class-II
2222210Ribosomal protein S15
11114Thaumatin family
22222212Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
22226721SRF-type transcription factor (DNA-binding and dimerisation domain)
810986647GATA zinc finger
175121172931166Amino acid permease
34633322Prolyl oligopeptidase family
22222212Ribosomal protein L30p/L7e
39776840Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
46645429Aconitase family (aconitate hydratase)
36634426Glycosyl hydrolase family 10
3224617Glycosyl hydrolases family 17
22212211Ribosomal protein S5, N-terminal domain
1111116Nucleoside diphosphate kinase
112Tetraspanin family
1121229Ribosomal protein S10p/S20e
34434523Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1111116SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
33333318Polyprenyl synthetase
36645529Hexokinase
8111885656Dynamin family
1111116Transcription factor TFIID (or TATA-binding protein, TBP)
57755534Rieske [2Fe-2S] domain
112Phytochrome region
710977848Biotin-requiring enzyme
1111116Phosphofructokinase
22222212Ribosomal protein S17
1231119Hydroxymethylglutaryl-coenzyme A reductase
44443423FGGY family of carbohydrate kinases, N-terminal domain
1221129Sodium:dicarboxylate symporter family
10201810131283Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
22222212Transcription factor TFIIB repeat
57866840Cytidine and deoxycytidylate deaminase zinc-binding region
1111127Molybdopterin oxidoreductase
78866641Chromo (CHRromatin Organisation MOdifier) domain
35544425Phosphatidylinositol-specific phospholipase C, Y domain
47856636Phosphatidylinositol-specific phospholipase C, X domain
6151776960D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222212Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
11111166-phosphogluconate dehydrogenase, C-terminal domain
4101046640Multicopper oxidase
1212101011964WW domain
1121117Ribosomal RNA adenine dimethylase
1113Yeast PIR protein repeat
10410910210899103625WD domain, G-beta repeat
57655533Heavy-metal-associated domain
33432318Adenylate kinase
22221211Phosphoglucomutase/phosphomannomutase, C-terminal domain
1121117Ribosomal protein S8
1131118Ribosomal protein S11
44443322LIM domain
11Matrixin
22322112Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
11
22223314chorismate binding enzyme
3333331860s Acidic ribosomal protein
44445526Prenyltransferase and squalene oxidase repeat
66565634Protein kinase C terminal domain
1111116Single-strand binding protein family
111115S-adenosylmethionine synthetase, N-terminal domain
87877744Bromodomain
81415991065Acyl-CoA dehydrogenase, C-terminal domain
14141314131482Ubiquitin carboxyl-terminal hydrolase
11114Ribosomal protein L36
12212210Ribonuclease T2 family
33333318HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
111115Urease alpha-subunit, N-terminal domain
5121467852Serine carboxypeptidase
88887847Phosphatidylinositol 3- and 4-kinase
13312212Transketolase, thiamine diphosphate binding domain
63364527Glycosyl hydrolases family 11
35533423Inositol monophosphatase family
44444424Glutaredoxin
25223115Isocitrate lyase family
23322214Serine hydroxymethyltransferase
12312211Iron-containing alcohol dehydrogenase
22221211Ribosomal protein L10
32232315KOW motif
1111116Ribosomal protein L34
11Ribosomal protein L33
33332115RF-1 domain
34421317Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
56654531Protein phosphatase 2C
22222212Nucleotidyl transferase
34532320Carbonic anhydrase
1131118Phosphoribulokinase / Uridine kinase family
56757737Fatty acid desaturase
66665635MutS domain V
1111116Delta-aminolevulinic acid dehydratase
28533324Arginase family
66666636MCM P-loop domain
12312211Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 3
11101299859FHA domain
394141344839242AMP-binding enzyme
33332317G-protein alpha subunit
899107952HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
814159101369His Kinase A (phospho-acceptor) domain
33232215Armadillo/beta-catenin-like repeat
202615221518116Tetratricopeptide repeat
34332520Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
910610121259BRCA1 C Terminus (BRCT) domain
67657738Glycosyl transferases group 1
56266631Glycosyl transferase family 2
1121128SAM domain (Sterile alpha motif)
1111116linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
214122121456Pectate lyase
23332215ribonuclease
111115Urease, gamma subunit
34533321CoA-ligase
211315172215103Phosphopantetheine attachment site
44442422Formyl transferase
68988746Metallopeptidase family M24
1413115111468Leucine Rich Repeat
216010232533172alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
44443423PB1 domain
22222212Staphylococcal nuclease homologue
1110121081061Rab-GTPase-TBC domain
1111116Tudor domain
2111117WH1 domain
33433319Zinc finger, ZZ type
11222210HRDC domain
99698748CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
53343422S1 RNA binding domain
1111116HIUase/Transthyretin family
22222212AhpC/TSA family
44444424tRNA synthetases class I (W and Y)
1113UvrD/REP helicase N-terminal domain
581264439Rhodanese-like domain
22221211Universal stress protein family
234034262529177Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
88789949tRNA synthetase class II core domain (G, H, P, S and T)
1111116SpoU rRNA Methylase family
22221312Tetrapyrrole (Corrin/Porphyrin) Methylases
111115Glycosyl transferase family, a/b domain
1214PDZ domain
29731224Class II Aldolase and Adducin N-terminal domain
43444423Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
45554528Fes/CIP4, and EFC/F-BAR homology domain
74255528IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
44244624Phospholipase D Active site motif
1141119Regulator of G protein signaling domain
44444323GTPase-activator protein for Ras-like GTPase
44443322RasGEF domain
44443322RasGEF N-terminal motif
88888747RhoGAP domain
66666636RhoGEF domain
33323317SPRY domain
33333318RNA polymerase Rpb1, domain 2
33323317Guanylate kinase
35444525Gelsolin repeat
895791048UBA/TS-N domain
14151214141382PHD-finger
111115GGL domain
66666636HECT-domain (ubiquitin-transferase)
1112117Helix-hairpin-helix motif
1111116MSP (Major sperm protein) domain
35343321Ribonuclease III domain
32433318Region in Clathrin and VPS
32233215RanBP1 domain
22122211PPIC-type PPIASE domain
33231315Zn-finger in Ran binding protein and others
1517111691381Zinc finger C-x8-C-x5-C-x3-H type (and similar)
22222212Poly(ADP-ribose) polymerase catalytic domain
1111116Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
365718362843218F-box domain
1111116Elongation factor 1 gamma, conserved domain
24423419Calpain family cysteine protease
12212210Copper fist DNA binding domain
46655632CRAL/TRIO domain
581556746BTB/POZ domain
1111116Ricin-type beta-trefoil lectin domain
23321112Inhibitor of Apoptosis domain
33333318Voltage gated chloride channel
23322214Caspase domain
71665131663GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
11POLO box duplicated region
162526152419125ABC transporter transmembrane region
11Integrase core domain
59846638FAD binding domain
1044711541Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111116HAMP domain
22222212ribosomal L5P family C-terminus
55754531Insulinase (Peptidase family M16)
35433321Dehydrogenase E1 component
111115Lumazine binding domain
66665534Elongation factor G C-terminus
55455529HMGL-like
44443423DnaJ central domain
23324418Starch binding domain
23322214Ribosomal protein L1p/L10e family
11151511111275Cation transporting ATPase, C-terminus
11151613121380Cation transporter/ATPase, N-terminus
1111116dUTPase
46545428Aconitase C-terminal domain
33333318Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
166815111066Acyl transferase domain
11114Urease beta subunit
5131249952Dihydrodipicolinate synthetase family
304023343131189haloacid dehalogenase-like hydrolase
59766639Glycosyl hydrolases family 2
1417218121890Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
111115Acylphosphatase
2111117Adenylosuccinate synthetase
12212210Asparaginase, N-terminal
32321112Peptidase S24-like
22222212Inorganic pyrophosphatase
8121488959Glycosyl hydrolases family 16
23324418Glycosyl hydrolases family 15
2161447851NADH:flavin oxidoreductase / NADH oxidase family
11111163-hydroxyacyl-CoA dehydrogenase, C-terminal domain
11222311Glycosyl hydrolase family 20, catalytic domain
67752532HhH-GPD superfamily base excision DNA repair protein
1111116AIR carboxylase
123236122625143GMC oxidoreductase
32232214Asparagine synthase
214651171925179Fungal cellulose binding domain
56756534Septin
1111116EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
251314328Flavin-binding monooxygenase-like
1113LPXTG cell wall anchor motif
33333318tRNA synthetases class I (E and Q), catalytic domain
1221118tRNA synthetases class I (R)
43444423XPG N-terminal domain
5191856861Metallo-beta-lactamase superfamily
32222213Choline/Carnitine o-acyltransferase
12312211Putative esterase
1111116Ferrochelatase
22522215Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111217Arginosuccinate synthase
1221118Electron transfer flavoprotein FAD-binding domain
33333318RNB domain
38954534Dioxygenase
32333216CNH domain
22221110Diacylglycerol kinase catalytic domain
75765434Dual specificity phosphatase, catalytic domain
23222213P21-Rho-binding domain
12121312111171PX domain
33232215Ras association (RalGDS/AF-6) domain
44454425UBX domain
44443423VHS domain
1111116Phosphoinositide 3-kinase C2
22221211DAHP synthetase I family
6912671050Carbon-nitrogen hydrolase
14411112N-acetyltransferase
1111116Prephenate dehydratase
1214PKD domain
44454425Syntaxin
54454527Pumilio-family RNA binding repeat
67664534Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
22222212ER lumen protein retaining receptor
22221211tRNA N6-adenosine threonylcarbamoyltransferase
1111329Histidinol dehydrogenase
44444424impB/mucB/samB family
111115
1111116Ribosomal L15
1131118Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
111115Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1111116Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
46636530Glycosyl hydrolase family 7
22Ring hydroxylating alpha subunit (catalytic domain)
1111116RNA pseudouridylate synthase
44444424Histone deacetylase domain
15422216POT family
111115PWWP domain
12162411111387SET domain
47744632Isochorismatase family
25632321Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
45444425XPG I-region
111115Acetokinase family
333312DNA photolyase
13116Nitroreductase family
2101229843Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
22222212Acyl CoA binding protein
44444323Cullin family
814678750FAD binding domain
92393228O-methyltransferase domain
33242216EamA-like transporter family
111115
88888747ThiF family
1111116Ribosomal family S4e
210335528Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
23433318Ammonium Transporter Family
37646632Sulfate permease family
1111116MATH domain
34434422Dehydratase family
22222313Transaldolase/Fructose-6-phosphate aldolase
23322214Mechanosensitive ion channel
1121117GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
44443423Adaptor complexes medium subunit family
57666636Exonuclease
22222212Dipeptidyl peptidase IV (DPP IV) N-terminal region
3101115NB-ARC domain
112330112217114Glycosyl hydrolase family 3 N terminal domain
1111127Ribosomal protein L44
11114Sodium:sulfate symporter transmembrane region
1111116DNA-dependent RNA polymerase
1111116FAD binding domain in molybdopterin dehydrogenase
1111116Glycosyl transferase family 4
32221212HCO3- transporter family
32222213Nucleosome assembly protein (NAP)
44444424Synaptobrevin
1111116GMP synthase C terminal domain
2112118Phage lysozyme
49947740Adenosine/AMP deaminase
11Barwin family
61110671151Oxidoreductase FAD-binding domain
52264221Thioesterase domain
22221211Histidine biosynthesis protein
33333318Glycosyltransferase family 20
23423317UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
112PAS fold
22221312Probable molybdopterin binding domain
44444424Sec1 family
22222212GDP dissociation inhibitor
5101057744Sodium/hydrogen exchanger family
22221211RNA polymerase Rpb3/RpoA insert domain
55553528Initiation factor 2 subunit family
24421215Electron transfer flavoprotein domain
1111116Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
1111116GTP1/OBG
23333317Gamma-glutamyltranspeptidase
1111116Ribosomal L40e family
1111116GrpE
23322214TatD related DNase
112116Inhibitor of apoptosis-promoting Bax1
1111116Eukaryotic DNA topoisomerase I, catalytic core
341332227Dynamin central region
22121