PFAM Domains • Thelephora ganbajun P2 v1.0
Annotations/GenomesBoled1Lacbi2Pilcr1Sebve1Thega1Tulca1TotalAnnotation Description
PFAMs
7,9318,6568,9308,3877,15710,44851,509
383954524245270ATPase family associated with various cellular activities (AAA)
314953373440244ABC transporter
44544526ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
14161516151591Elongation factor Tu GTP binding domain
12201010111073Helix-loop-helix DNA-binding domain
1310647646Hsp20/alpha crystallin family
71524121747122Hsp70 protein
789108850KH domain
1111116SH2 domain
264033322640197SH3 domain
10151110111067Actin
669565342331314Ankyrin repeat
1197128754ADP-ribosylation factor family
422443161340178Eukaryotic aspartyl protease
33334218Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
1214Cytochrome b/b6/petB
1111116Cytochrome c
81113147760Double-stranded RNA binding motif
171822171926119EF hand
12111284Fe-4S binding domain
1111116Fibronectin type III domain
2013161461584Glutathione S-transferase, C-terminal domain
15111211Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
141012106961Homeodomain
11114Laminin EGF domain
22322213lactate/malate dehydrogenase, NAD binding domain
277955760Myosin head (motor domain)
1268613013183129685Cytochrome P450
1712172692284051,0772,367Protein kinase domain
1414151411977Pyridine nucleotide-disulphide oxidoreductase
265326622731225Ras family
67914111663Response regulator receiver domain
8591528RNase H
677168726867413RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
718Reverse transcriptase (RNA-dependent DNA polymerase)
111126Copper/zinc superoxide dismutase (SODC)
43222316Iron/manganese superoxide dismutases, alpha-hairpin domain
25318251669Subtilase family
352142241327162Sugar (and other) transporter
10101314111472Thioredoxin
76545431Tubulin/FtsZ family, GTPase domain
6610165851von Willebrand factor type A domain
736358775071392Zinc finger, C2H2 type
616668565656363Zinc finger, C3HC4 type (RING finger)
344614109113Zinc knuckle
22222212Protein-tyrosine phosphatase
634979695149360short chain dehydrogenase
313133242328170Zinc-binding dehydrogenase
44545628Thiolase, N-terminal domain
35817226Beta-ketoacyl synthase, N-terminal domain
374324232Fe-2S iron-sulfur cluster binding domain
33Papain family cysteine protease
1111116Enolase, C-terminal TIM barrel domain
213Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
713778648Glutamine amidotransferase class-I
15132311111285TCP-1/cpn60 chaperonin family
112ATP synthase A chain
37434223Glutamine synthetase, catalytic domain
1111127Triosephosphate isomerase
14201710111082E1-E2 ATPase
162421161220109Core histone H2A/H2B/H3/H4
33Copper binding proteins, plastocyanin/azurin family
6948101249Alpha amylase, catalytic domain
56555430Phorbol esters/diacylglycerol binding domain (C1 domain)
34733323Bacterial transferase hexapeptide (six repeats)
73533324tRNA synthetases class I (I, L, M and V)
1014911201074Cyclin, N-terminal domain
22152897687Carboxylesterase family
24446626DNA polymerase family B
54343524ATP synthase subunit C
1321119Peroxidase
62104325Beta-lactamase
44444424C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
323329241928165Calcineurin-like phosphoesterase
10971953282Cellulase (glycosyl hydrolase family 5)
55757534tRNA synthetases class II (D, K and N)
354142383339228Mitochondrial carrier protein
16121513141585Aminotransferase class I and II
78666639Phosphoribosyl transferase domain
15131613141788Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
23222213Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
1111138Chaperonin 10 Kd subunit
131843301311128C2 domain
192420382217140PH domain
57765434bZIP transcription factor
17151812141995Aldehyde dehydrogenase family
597374537141371Fungal Zn(2)-Cys(6) binuclear cluster domain
292324212018135Cytochrome b5-like Heme/Steroid binding domain
23218Oxidoreductase molybdopterin binding domain
7891013653Oxidoreductase NAD-binding domain
242229212330149SNF2 family N-terminal domain
23222213Ribosomal protein S7p/S5e
222323232122134Ubiquitin-conjugating enzyme
56755634Isocitrate/isopropylmalate dehydrogenase
22222111Ribosomal Proteins L2, RNA binding domain
22223213Hsp90 protein
22222919Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111127Dihydrofolate reductase
9221115Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
13610Cupin
213Annexin
819Eukaryotic-type carbonic anhydrase
333344202-oxoacid dehydrogenases acyltransferase (catalytic domain)
21313212Catalase
111115Disintegrin
1211510UDP-glucoronosyl and UDP-glucosyl transferase
56575634Aminotransferase class-III
24222315Ribosomal protein S19
1111116DNA gyrase B
43213114Thiamine pyrophosphate enzyme, central domain
44433321Lyase
13321212Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111127Adenylate and Guanylate cyclase catalytic domain
1112117ATP synthase delta (OSCP) subunit
111115Orotidine 5'-phosphate decarboxylase / HUMPS family
1211117Indole-3-glycerol phosphate synthase
124119Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
9101117111371Kinesin motor domain
293633283129186DnaJ domain
14141414141383Proteasome subunit
37825833Major intrinsic protein
1111116ATP synthase
6111110Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
2111128Profilin
21221210Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
252133181424135Ubiquitin family
65445731Cofilin/tropomyosin-type actin-binding protein
212121914-3-3 protein
2114Alkaline phosphatase
112127Zinc carboxypeptidase
302440362655211Aldo/keto reductase family
131413922980Myb-like DNA-binding domain
656851141Forkhead domain
1113Glycosyl hydrolases family 32 N-terminal domain
11511110Ribosomal protein L16p/L10e
22222212Ribosomal protein S14p/S29e
36423725FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
1211117
75686840Flavodoxin
11111510Calreticulin family
335149438Common central domain of tyrosinase
567107641Aminotransferase class-V
41312112Ribonucleotide reductase, small chain
588059504359349DEAD/DEAH box helicase
9711598787897563Helicase conserved C-terminal domain
11Fructose-bisphosphate aldolase class-I
1111127EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22212211Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111127Ribosomal protein L5
44554224Pyridoxal-dependent decarboxylase conserved domain
33333318Citrate synthase, C-terminal domain
56754532GHMP kinases N terminal domain
76555533Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
97877947Pyridoxal-phosphate dependent enzyme
12141716141588NUDIX domain
45634426pfkB family carbohydrate kinase
46761731Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
22222212Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
9714861357Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
134Lipoxygenase
44544425ATP synthase alpha/beta chain, C terminal domain
55464428Calponin homology (CH) domain
55555530Glutamine amidotransferases class-II
22221211Ribosomal protein S15
23312718Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1141119Ribonucleotide reductase, all-alpha domain
22232213Ribosomal protein S2
23322214SRF-type transcription factor (DNA-binding and dimerisation domain)
8121010101060GATA zinc finger
232325121322118Amino acid permease
11Bacterial regulatory proteins, crp family
989710649Prolyl oligopeptidase family
11412110Ribosomal protein L30p/L7e
1281279755Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
48444529Aconitase family (aconitate hydratase)
2101325Glycosyl hydrolase family 10
13151112Glycosyl hydrolases family 17
22232213Ribosomal protein S5, N-terminal domain
12222312Nucleoside diphosphate kinase
3227Tetraspanin family
213Galactoside-binding lectin
2211219Ribosomal protein S10p/S20e
58233223Arrestin (or S-antigen), N-terminal domain
2111117Phosphoglucose isomerase
1111127Carbohydrate phosphorylase
1111127SecY translocase
15211111Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22332214Ribosomal protein L6
58443327Polyprenyl synthetase
22422214Hexokinase
688156851Dynamin family
1221118Transcription factor TFIID (or TATA-binding protein, TBP)
25542422Rieske [2Fe-2S] domain
112Phytochrome region
1315Proton-conducting membrane transporter
78788846Biotin-requiring enzyme
2111117Phosphofructokinase
22222313Ribosomal protein S17
1211128Hydroxymethylglutaryl-coenzyme A reductase
22343418FGGY family of carbohydrate kinases, N-terminal domain
781258747Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
33322215Transcription factor TFIIB repeat
87867541Cytidine and deoxycytidylate deaminase zinc-binding region
2111117Molybdopterin oxidoreductase
102114461065Chromo (CHRromatin Organisation MOdifier) domain
14231112Phosphatidylinositol-specific phospholipase C, Y domain
14242114Phosphatidylinositol-specific phospholipase C, X domain
54664631D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
26222418Malic enzyme, N-terminal domain
11111166-phosphogluconate dehydrogenase, C-terminal domain
10132062455Multicopper oxidase
118102381373WW domain
12422213Ribosomal RNA adenine dimethylase
2902212933401352321,511WD domain, G-beta repeat
43424219Heavy-metal-associated domain
43333319Adenylate kinase
22122211Phosphoglucomutase/phosphomannomutase, C-terminal domain
1112117Ribosomal protein S8
12212210Ribosomal protein S11
676851143LIM domain
145Matrixin
23223214Regulator of chromosome condensation (RCC1) repeat
22232213Ribosomal protein S13/S18
12115NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22222111chorismate binding enzyme
3433352160s Acidic ribosomal protein
56445428Prenyltransferase and squalene oxidase repeat
96787643Protein kinase C terminal domain
1111116Single-strand binding protein family
111115S-adenosylmethionine synthetase, N-terminal domain
14101011111066Bromodomain
7891181053Acyl-CoA dehydrogenase, C-terminal domain
141615162417102Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
23212919Ribonuclease T2 family
644452043HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
167151213467Serine carboxypeptidase
8810107851Phosphatidylinositol 3- and 4-kinase
22212110Transketolase, thiamine diphosphate binding domain
71219Glycosyl hydrolases family 11
111115WHEP-TRS domain
42323216Inositol monophosphatase family
55444426Glutaredoxin
32422518Isocitrate lyase family
1111116Serine hydroxymethyltransferase
22412112Iron-containing alcohol dehydrogenase
22212211Ribosomal protein L10
28345325KOW motif
1111116Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
32242215RF-1 domain
32311111Sodium:solute symporter family
211116Imidazoleglycerol-phosphate dehydratase
121116DNA polymerase family A
1113118IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
791668551Protein phosphatase 2C
23223214Nucleotidyl transferase
27246324Carbonic anhydrase
1111116Phosphoribulokinase / Uridine kinase family
138976750Fatty acid desaturase
66666838MutS domain V
1111116Delta-aminolevulinic acid dehydratase
32321112Arginase family
66667637MCM P-loop domain
1212118Squalene/phytoene synthase
111112167966FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
252942133317159AMP-binding enzyme
184934172222162G-protein alpha subunit
20161518141194HMG (high mobility group) box
1113NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
112Cytochrome c oxidase subunit III
14686732His Kinase A (phospho-acceptor) domain
324934162Armadillo/beta-catenin-like repeat
46735711627474793Tetratricopeptide repeat
72365225Ion transport protein
1111127DNA gyrase/topoisomerase IV, subunit A
11Death domain
12121010111065BRCA1 C Terminus (BRCT) domain
77669742Glycosyl transferases group 1
33424521Glycosyl transferase family 2
1124SAM domain (Sterile alpha motif)
3442417linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
21214Pectate lyase
3126ribonuclease
1111116Urease, gamma subunit
33333318CoA-ligase
751027233Phosphopantetheine attachment site
42222113Formyl transferase
1091010121061Metallopeptidase family M24
17161414161592Leucine Rich Repeat
292048233021171alpha/beta hydrolase fold
33343420RNA polymerase Rpb2, domain 6
57835735PB1 domain
22232213Staphylococcal nuclease homologue
1111810111061Rab-GTPase-TBC domain
1112117Tudor domain
22221211WH1 domain
34653627Zinc finger, ZZ type
111126HRDC domain
99101091057CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
44443423S1 RNA binding domain
1111116HIUase/Transthyretin family
44624727AhpC/TSA family
94454531tRNA synthetases class I (W and Y)
12115UvrD/REP helicase N-terminal domain
44456427Rhodanese-like domain
12212210Universal stress protein family
302832301725162Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22232213AIR synthase related protein, N-terminal domain
66666636tRNA synthetase class II core domain (G, H, P, S and T)
1236Phage integrase family
25232317Tetrapyrrole (Corrin/Porphyrin) Methylases
1111138Glycosyl transferase family, a/b domain
113117Class II Aldolase and Adducin N-terminal domain
33333419Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
58544733Fes/CIP4, and EFC/F-BAR homology domain
45634325IQ calmodulin-binding motif
22222111Phosphoinositide 3-kinase family, accessory domain (PIK domain)
44753427Phospholipase D Active site motif
1111116Regulator of G protein signaling domain
44444424GTPase-activator protein for Ras-like GTPase
671165742RasGEF domain
781166745RasGEF N-terminal motif
12131413111679RhoGAP domain
14161316121384RhoGEF domain
44324320SPRY domain
33733322RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
34443422Gelsolin repeat
9109910956UBA/TS-N domain
181818161820108PHD-finger
2114GGL domain
5510105439HECT-domain (ubiquitin-transferase)
42223215Helix-hairpin-helix motif
1211128MSP (Major sperm protein) domain
77678742Ribonuclease III domain
221412526Region in Clathrin and VPS
33333419RanBP1 domain
22232213PPIC-type PPIASE domain
45125219Zn-finger in Ran binding protein and others
213028292033161Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1111116B-box zinc finger
44912103473Poly(ADP-ribose) polymerase catalytic domain
22222111Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
991561142061682721,015F-box domain
1211128Elongation factor 1 gamma, conserved domain
18221620Calpain family cysteine protease
22232213Copper fist DNA binding domain
66847334CRAL/TRIO domain
151723243225136BTB/POZ domain
5115711544Ricin-type beta-trefoil lectin domain
1111127Inhibitor of Apoptosis domain
23333418Voltage gated chloride channel
13173124411100Caspase domain
7241241746GDSL-like Lipase/Acylhydrolase
1211117Poly-adenylate binding protein, unique domain
1311118POLO box duplicated region
1113NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
111823211319105ABC transporter transmembrane region
623314Integrase core domain
33464323FAD binding domain
214411Condensation domain
1111217S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1121117HAMP domain
22222212ribosomal L5P family C-terminus
65596435Insulinase (Peptidase family M16)
55544427Dehydrogenase E1 component
1111116Lumazine binding domain
610785440Elongation factor G C-terminus
44444424HMGL-like
44444424DnaJ central domain
132129Starch binding domain
22323315Ribosomal protein L1p/L10e family
55964635Cation transporting ATPase, C-terminus
7141265549Cation transporter/ATPase, N-terminus
121116dUTPase
35444424Aconitase C-terminal domain
35333421Amino acid kinase family
1211117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
441219434Acyl transferase domain
1111116Urease beta subunit
21212210Dihydrodipicolinate synthetase family
262834242224158haloacid dehalogenase-like hydrolase
1122511Glycosyl hydrolases family 2
1211647444Glycosyl hydrolases family 18
1111217Proliferating cell nuclear antigen, N-terminal domain
1124Acylphosphatase
2211118Adenylosuccinate synthetase
1111138Asparaginase, N-terminal
24322215Peptidase S24-like
1111116Inorganic pyrophosphatase
34345221Glycosyl hydrolases family 16
12322515Glycosyl hydrolases family 15
1391134949NADH:flavin oxidoreductase / NADH oxidase family
11211283-hydroxyacyl-CoA dehydrogenase, C-terminal domain
41411112Glycosyl hydrolase family 20, catalytic domain
55855432HhH-GPD superfamily base excision DNA repair protein
1111116AIR carboxylase
1412251521381GMC oxidoreductase
22222212Asparagine synthase
1150110162Fungal cellulose binding domain
67656535Septin
1112218EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
3321211Flavin-binding monooxygenase-like
33345321tRNA synthetases class I (E and Q), catalytic domain
22111815tRNA synthetases class I (R)
517955445XPG N-terminal domain
991197954Metallo-beta-lactamase superfamily
21126F5/8 type C domain
74545530Choline/Carnitine o-acyltransferase
1112117Putative esterase
1111127Glycosyl hydrolase family 9
1111116Ferrochelatase
32222213Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1212118Arginosuccinate synthase
1121128Electron transfer flavoprotein FAD-binding domain
33333419RNB domain
22671422Dioxygenase
354714437CNH domain
22222212Diacylglycerol kinase catalytic domain
131613811566Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
36876939P21-Rho-binding domain
13141715131385PX domain
33423419Ras association (RalGDS/AF-6) domain
36644629UBX domain
56545631VHS domain
1112117Phosphoinositide 3-kinase C2
22232213DAHP synthetase I family
43345423Carbon-nitrogen hydrolase
134N-acetyltransferase
112Geminivirus Rep catalytic domain
1111127Prephenate dehydratase
54455225Syntaxin
65665533Pumilio-family RNA binding repeat
86776640Histone-like transcription factor (CBF/NF-Y) and archaeal histone
2211118Pterin binding enzyme
1111116ER lumen protein retaining receptor
22232213Glycoprotease family
1111116Histidinol dehydrogenase
33333419impB/mucB/samB family
1112117
1111116Ribosomal L15
1111116Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1111116Ribosomal S17
111115Ribulose-phosphate 3 epimerase family
1112117Translationally controlled tumour protein
152733Glycosyl hydrolase family 7
22222212RNA pseudouridylate synthase
67868944Histone deacetylase domain
24113213POT family
26111112PWWP domain
152916161319108SET domain
32655223Isochorismatase family
22222212Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
9381065674XPG I-region
111115Acetokinase family
111115DNA photolyase
121116Cation-independent mannose-6-phosphate receptor repeat
22Nitroreductase family
1411119Cytosol aminopeptidase family, catalytic domain
11215Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1112117Ribosomal protein S16
33253319Acyl CoA binding protein
99575742Cullin family
1111217Elongation factor TS
46433222FAD binding domain
48244343O-methyltransferase domain
26423118EamA-like transporter family
22332214
137797952ThiF family
1111116Ribosomal family S4e
123814Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
27721322Ammonium Transporter Family
47334324Sulfate permease family
11127113MATH domain
22222111Dehydratase family
33211313Transaldolase/Fructose-6-phosphate aldolase
23313315Mechanosensitive ion channel
1111217GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
43444524Adaptor complexes medium subunit family
1810991148Exonuclease
2111319Dipeptidyl peptidase IV (DPP IV) N-terminal region
1168NB-ARC domain
6211841344Glycosyl hydrolase family 3 N terminal domain
1112117Ribosomal protein L44
11Sodium:sulfate symporter transmembrane region
3121119DNA-dependent RNA polymerase
1111116Glycosyl transferase family 4
121127HCO3- transporter family
23222415Nucleosome assembly protein (NAP)
44454526Synaptobrevin
1311118GMP synthase C terminal domain
33Phage lysozyme
17533423Adenosine/AMP deaminase
44443221Oxidoreductase FAD-binding domain
227415Thioesterase domain
22222212Histidine biosynthesis protein
34343421Glycosyltransferase family 20
1111116UDP-glucose/GDP-mannose dehydrogenase family, central domain
24222214Carbamoyl-phosphate synthase small chain, CPSase domain
1113PAS fold
11Diguanylate cyclase, GGDEF domain
22222111Probable molybdopterin binding domain
43444625Sec1 family
22222212GDP dissociation inhibitor
57965537Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
44464325Initiation factor 2 subunit family
2114PQQ enzyme repeat
22222111Electron transfer flavoprotein domain
1111116Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
2111117GTP1/OBG
23223214Gamma-glutamyltranspeptidase
11Ribosomal L40e family
1111116GrpE
37432322TatD related DNase
1111217Inhibitor of apoptosis-promoting Bax1
1111116Eukaryotic DNA topoisomerase I, catalytic core
433431027Dynamin central region
432122146-O-methylguanine DNA methyltransferase, DNA binding domain
11Bacteriorhodopsin-like protein
22222212Carboxyl transferase domain
63922426UbiA prenyltransferase family
42434219Endoribonuclease L-PSP
12115Phosphorylase superfamily
1111116Mannose-6-phosphate isomerase
121095101157Cys/Met metabolism PLP-dependent enzyme
47343627Glycosyl hydrolases family 31
1111116NADH ubiquinone oxidoreductase, 20 Kd subunit