PFAM Domains • Trichophaea hybrida UTF0779 v1.0
Annotations/GenomesAscni1Plemel1Pyrco1Sarco1Trihyb1Wilmi1TotalAnnotation Description
PFAMs
6,22611,3407,0498,0239,6687,42149,727
2137 transmembrane receptor (rhodopsin family)
117 transmembrane receptor (Secretin family)
415741445255290ATPase family associated with various cellular activities (AAA)
324334343229204ABC transporter
44454425ATP synthase alpha/beta family, nucleotide-binding domain
14161515151489Elongation factor Tu GTP binding domain
109898953Helix-loop-helix DNA-binding domain
47543427Hsp20/alpha crystallin family
8178924975Hsp70 protein
10810891156KH domain
11114SH2 domain
201422211223112SH3 domain
10101011101061Actin
56902102301093071,002Ankyrin repeat
123PAN domain
78798746ADP-ribosylation factor family
312285333Eukaryotic aspartyl protease
44444424Cyclic nucleotide-binding domain
1111116Cytochrome c
33334521Double-stranded RNA binding motif
172181611771EF hand
121154Fe-4S binding domain
11231210Fibronectin type III domain
61371961061Glutathione S-transferase, C-terminal domain
21212210Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
34433522Homeodomain
22222212lactate/malate dehydrogenase, NAD binding domain
45544426Myosin head (motor domain)
2813045914150385Cytochrome P450
8918598145192140849Protein kinase domain
1013131481270Pyridine nucleotide-disulphide oxidoreductase
252726263435173Ras family
13161617161694Response regulator receiver domain
532412733RNase H
656465745669393RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
22Reverse transcriptase (RNA-dependent DNA polymerase)
23443420Copper/zinc superoxide dismutase (SODC)
22322314Iron/manganese superoxide dismutases, alpha-hairpin domain
7211010131273Subtilase family
145534403127201Sugar (and other) transporter
891211101060Thioredoxin
2322211Trypsin
45444425Tubulin/FtsZ family, GTPase domain
23251619von Willebrand factor type A domain
5026567336104345Zinc finger, C2H2 type
3894874753229Zinc finger, C3HC4 type (RING finger)
137122511977Zinc knuckle
22222212Protein-tyrosine phosphatase
4313450983746408short chain dehydrogenase
167324431628200Zinc-binding dehydrogenase
66555532Thiolase, N-terminal domain
2403213776Beta-ketoacyl synthase, N-terminal domain
434524222Fe-2S iron-sulfur cluster binding domain
1111116Enolase, C-terminal TIM barrel domain
881098851Glutamine amidotransferase class-I
101010991058TCP-1/cpn60 chaperonin family
34363322Glutamine synthetase, catalytic domain
1211117Triosephosphate isomerase
13181412191894E1-E2 ATPase
8158881158Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
13445522Alpha amylase, catalytic domain
21322212Phorbol esters/diacylglycerol binding domain (C1 domain)
859124745Bacterial transferase hexapeptide (six repeats)
56446429tRNA synthetases class I (I, L, M and V)
79778745Cyclin, N-terminal domain
7281322121092Carboxylesterase family
44434423DNA polymerase family B
53343321ATP synthase subunit C
16221214Peroxidase
8332218Beta-lactamase
35443322C-5 cytosine-specific DNA methylase
222223262021134Calcineurin-like phosphoesterase
4207125351Cellulase (glycosyl hydrolase family 5)
676106641tRNA synthetases class II (D, K and N)
353540373434215Mitochondrial carrier protein
11recA bacterial DNA recombination protein
12171514181692Aminotransferase class I and II
849114945Phosphoribosyl transferase domain
11111114111169Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
11Bacterial regulatory helix-turn-helix proteins, AraC family
1111116Chaperonin 10 Kd subunit
11111213121372C2 domain
20101817111995PH domain
91381111658bZIP transcription factor
11171313121278Aldehyde dehydrogenase family
7311277796476481Fungal Zn(2)-Cys(6) binuclear cluster domain
181922191819115Cytochrome b5-like Heme/Steroid binding domain
13332214Oxidoreductase molybdopterin binding domain
81091081156Oxidoreductase NAD-binding domain
224126254739200SNF2 family N-terminal domain
22222212Ribosomal protein S7p/S5e
232421242425141Ubiquitin-conjugating enzyme
57565533Isocitrate/isopropylmalate dehydrogenase
24222214Ribosomal Proteins L2, RNA binding domain
1112117Hsp90 protein
22222212Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
57535328Chitin recognition protein
310856537Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
52119Cupin
32233417Annexin
11212310Eukaryotic-type carbonic anhydrase
334333192-oxoacid dehydrogenases acyltransferase (catalytic domain)
36345324Catalase
1111116Disintegrin
336UDP-glucoronosyl and UDP-glucosyl transferase
48546633Aminotransferase class-III
22232213Ribosomal protein S19
1111116DNA gyrase B
43444423Thiamine pyrophosphate enzyme, central domain
34333319Lyase
22222212Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111116Adenylate and Guanylate cyclase catalytic domain
11Atrial natriuretic peptide
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
312118Aromatic amino acid lyase
1112117Pyruvate kinase, barrel domain
9101010101059Kinesin motor domain
262827282526160DnaJ domain
14141415121483Proteasome subunit
28253323Major intrinsic protein
1111116ATP synthase
13122110Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
111115Profilin
22122211Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
13171021141691Ubiquitin family
44344322Cofilin/tropomyosin-type actin-binding protein
3322331614-3-3 protein
31451418Alkaline phosphatase
22228Zinc carboxypeptidase
133422261718130Aldo/keto reductase family
158191481882Myb-like DNA-binding domain
44444424Forkhead domain
111115Glycosyl hydrolases family 32 N-terminal domain
1211218Ribosomal protein L16p/L10e
22232213Ribosomal protein S14p/S29e
53334321FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
22228
54464528Flavodoxin
1112117Calreticulin family
810139161571Common central domain of tyrosinase
67666536Aminotransferase class-V
1112117Ribonucleotide reductase, small chain
425646434845280DEAD/DEAH box helicase
7283827986100502Helicase conserved C-terminal domain
11Fructose-bisphosphate aldolase class-I
1112117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
21231211Ribosomal protein L5
57968641Pyridoxal-dependent decarboxylase conserved domain
35334321Citrate synthase, C-terminal domain
55553528GHMP kinases N terminal domain
66655533Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
10121011101164Pyridoxal-phosphate dependent enzyme
11161317131181NUDIX domain
55565531pfkB family carbohydrate kinase
10161119Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
22232213Ribosomal protein L3
22232213Ribosomal protein L11, RNA binding domain
812911101060Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
1113Lipoxygenase
44454425ATP synthase alpha/beta chain, C terminal domain
55556632Calponin homology (CH) domain
53443524Glutamine amidotransferases class-II
22212211Ribosomal protein S15
1146Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
22242214Ribosomal protein S2
22224214SRF-type transcription factor (DNA-binding and dimerisation domain)
76786741GATA zinc finger
141620231126110Amino acid permease
49256430Prolyl oligopeptidase family
23211110Ribosomal protein L30p/L7e
49665535Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
45444425Aconitase family (aconitate hydratase)
13332113Glycosyl hydrolase family 10
44444424Glycosyl hydrolases family 17
22222212Ribosomal protein S5, N-terminal domain
1111116Nucleoside diphosphate kinase
11114Tetraspanin family
1135Galactoside-binding lectin
22442216Ribosomal protein S10p/S20e
33333318Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1111116SecY translocase
111115Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
45335525Polyprenyl synthetase
34443321Hexokinase
51648111054Dynamin family
1113118Transcription factor TFIID (or TATA-binding protein, TBP)
34434422Rieske [2Fe-2S] domain
112Phytochrome region
88876744Biotin-requiring enzyme
1111116Phosphofructokinase
1212118Ribosomal protein S17
1111116Hydroxymethylglutaryl-coenzyme A reductase
33332317FGGY family of carbohydrate kinases, N-terminal domain
711777746Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
45463325Transcription factor TFIIB repeat
57586637Cytidine and deoxycytidylate deaminase zinc-binding region
1111116Molybdopterin oxidoreductase
61178151461Chromo (CHRromatin Organisation MOdifier) domain
22222212Phosphatidylinositol-specific phospholipase C, Y domain
34224318Phosphatidylinositol-specific phospholipase C, X domain
65653429D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222212Malic enzyme, N-terminal domain
222122116-phosphogluconate dehydrogenase, C-terminal domain
4104611742Multicopper oxidase
112Granulin
10111110101365WW domain
23222213Ribosomal RNA adenine dimethylase
3339Yeast PIR protein repeat
112117108115140108700WD domain, G-beta repeat
45335424Heavy-metal-associated domain
43444423Adenylate kinase
23123112Phosphoglucomutase/phosphomannomutase, C-terminal domain
22322213Ribosomal protein S8
22132212Ribosomal protein S11
45455629LIM domain
112Matrixin
24334117Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
22233214chorismate binding enzyme
3344332060s Acidic ribosomal protein
44443423Prenyltransferase and squalene oxidase repeat
53755530Protein kinase C terminal domain
1111116Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
67666637Bromodomain
91081010956Acyl-CoA dehydrogenase, C-terminal domain
13161516171592Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
12122210Ribonuclease T2 family
33353320HSF-type DNA-binding
22332214SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
314375638Serine carboxypeptidase
88887847Phosphatidylinositol 3- and 4-kinase
1112117Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
23423317Inositol monophosphatase family
44554426Glutaredoxin
22222313Isocitrate lyase family
22222212Serine hydroxymethyltransferase
34122214Iron-containing alcohol dehydrogenase
12312211Ribosomal protein L10
55555530KOW motif
111115Ribosomal protein L34
11Ribosomal protein L33
23223214RF-1 domain
23222213Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
56575533Protein phosphatase 2C
34463323Nucleotidyl transferase
27332118Carbonic anhydrase
2125Phosphoribulokinase / Uridine kinase family
46555429Fatty acid desaturase
66668840MutS domain V
1111116Delta-aminolevulinic acid dehydratase
25432218Arginase family
66666636MCM P-loop domain
23222213Squalene/phytoene synthase
7911811753FHA domain
194426262220157AMP-binding enzyme
33334319G-protein alpha subunit
888710849HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
9101212121166His Kinase A (phospho-acceptor) domain
33322316Armadillo/beta-catenin-like repeat
231530242651169Tetratricopeptide repeat
23251215Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
812111271060BRCA1 C Terminus (BRCT) domain
54565530Glycosyl transferases group 1
23321314Glycosyl transferase family 2
1221219SAM domain (Sterile alpha motif)
1111116linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
18252321Pectate lyase
314ribonuclease
1111116Urease, gamma subunit
44434423CoA-ligase
6438117681Phosphopantetheine attachment site
22232213Formyl transferase
611788747Metallopeptidase family M24
153141121661Leucine Rich Repeat
21152027421108alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
34444423PB1 domain
22222212Staphylococcal nuclease homologue
10121010111063Rab-GTPase-TBC domain
1111116Tudor domain
1111116WH1 domain
35555528Zinc finger, ZZ type
1211128HRDC domain
10610971052CBS domain
22224214Ribosomal protein L13
22222111Ribosomal protein L4/L1 family
1111116Clp protease
24443320S1 RNA binding domain
1111116HIUase/Transthyretin family
44353524AhpC/TSA family
44445425tRNA synthetases class I (W and Y)
13126215UvrD/REP helicase N-terminal domain
584510638Rhodanese-like domain
22222212Universal stress protein family
252720361622146Acetyltransferase (GNAT) family
111115SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22232213AIR synthase related protein, N-terminal domain
87897847tRNA synthetase class II core domain (G, H, P, S and T)
22222212SpoU rRNA Methylase family
22223213Tetrapyrrole (Corrin/Porphyrin) Methylases
2212119Glycosyl transferase family, a/b domain
1113PDZ domain
26433321Class II Aldolase and Adducin N-terminal domain
44444424Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
45555529Fes/CIP4, and EFC/F-BAR homology domain
34544626IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
53553526Phospholipase D Active site motif
15116115Regulator of G protein signaling domain
44444424GTPase-activator protein for Ras-like GTPase
55556531RasGEF domain
55554529RasGEF N-terminal motif
10101111101062RhoGAP domain
66665635RhoGEF domain
31164211055SPRY domain
33333318RNA polymerase Rpb1, domain 2
3211119Guanylate kinase
33353320Gelsolin repeat
8510117849UBA/TS-N domain
13151316161891PHD-finger
11Filamin/ABP280 repeat
1111116GGL domain
66666636HECT-domain (ubiquitin-transferase)
2111117Helix-hairpin-helix motif
2111117MSP (Major sperm protein) domain
64664935Ribonuclease III domain
25226219Region in Clathrin and VPS
23343318RanBP1 domain
21322313PPIC-type PPIASE domain
23223315Zn-finger in Ran binding protein and others
141120241219100Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11B-box zinc finger
24243318Poly(ADP-ribose) polymerase catalytic domain
112116Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
5028651751781416F-box domain
1111116Elongation factor 1 gamma, conserved domain
22222212Calpain family cysteine protease
1212129Copper fist DNA binding domain
45555529CRAL/TRIO domain
111516163617111BTB/POZ domain
123Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
33343319Voltage gated chloride channel
13718626Caspase domain
48863433GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
111115POLO box duplicated region
13201413141286ABC transporter transmembrane region
22Integrase core domain
46556531FAD binding domain
211222221Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111116HAMP domain
22342215ribosomal L5P family C-terminus
66676637Insulinase (Peptidase family M16)
33333318Dehydrogenase E1 component
1111116Lumazine binding domain
66665635Elongation factor G C-terminus
45443424HMGL-like
44444424DnaJ central domain
22Starch binding domain
23223214Ribosomal protein L1p/L10e family
788691048Cation transporting ATPase, C-terminus
878781149Cation transporter/ATPase, N-terminus
121116dUTPase
45444425Aconitase C-terminal domain
43444423Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
2393213775Acyl transferase domain
1111116Urease beta subunit
24333318Dihydrodipicolinate synthetase family
281427281531143haloacid dehalogenase-like hydrolase
4232112Glycosyl hydrolases family 2
212563432Glycosyl hydrolases family 18
1114119Proliferating cell nuclear antigen, N-terminal domain
112Translation initiation factor IF-3, C-terminal domain
1111116Acylphosphatase
1111116Adenylosuccinate synthetase
12212210Asparaginase, N-terminal
32323316Peptidase S24-like
1112117Inorganic pyrophosphatase
522877756Glycosyl hydrolases family 16
13241213Glycosyl hydrolases family 15
310452226NADH:flavin oxidoreductase / NADH oxidase family
122122103-hydroxyacyl-CoA dehydrogenase, C-terminal domain
1312119Glycosyl hydrolase family 20, catalytic domain
35454324HhH-GPD superfamily base excision DNA repair protein
1112117AIR carboxylase
33515161616101GMC oxidoreductase
22222212Asparagine synthase
2137153242Fungal cellulose binding domain
66666636Septin
111115EF-1 guanine nucleotide exchange domain
1111217Homoserine dehydrogenase
1811415Flavin-binding monooxygenase-like
34333319tRNA synthetases class I (E and Q), catalytic domain
1112117tRNA synthetases class I (R)
44343422XPG N-terminal domain
55573833Metallo-beta-lactamase superfamily
111115F5/8 type C domain
22223213Choline/Carnitine o-acyltransferase
1111116Putative esterase
1111116Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1112117Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
11Ezrin/radixin/moesin family
33334319RNB domain
18664530Dioxygenase
33332317CNH domain
12222211Diacylglycerol kinase catalytic domain
10109119857Dual specificity phosphatase, catalytic domain
22322314P21-Rho-binding domain
12141413131379PX domain
22332315Ras association (RalGDS/AF-6) domain
33346524UBX domain
44445425VHS domain
1111116Phosphoinositide 3-kinase C2
23222213DAHP synthetase I family
59665536Carbon-nitrogen hydrolase
11114N-acetyltransferase
33Geminivirus Rep catalytic domain
1111116Prephenate dehydratase
34343522Syntaxin
54554528Pumilio-family RNA binding repeat
66765636Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
22332214ER lumen protein retaining receptor
22222212Glycoprotease family
1111116Histidinol dehydrogenase
34343320impB/mucB/samB family
11114
1111116Ribosomal L15
13114111Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1112117Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
14229Glycosyl hydrolase family 7
11Ring hydroxylating alpha subunit (catalytic domain)
1111116RNA pseudouridylate synthase
55465530Histone deacetylase domain
36364527POT family
1211117PWWP domain
12121315171483SET domain
413474638Isochorismatase family
34433421Permease family
2111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
44443423XPG I-region
1111116Acetokinase family
11Transposase, Mutator family
11AcrB/AcrD/AcrF family
21222110DNA photolyase
31127NlpC/P60 family
1214Nitroreductase family
112Zinc dependent phospholipase C
2338Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
22222212Acyl CoA binding protein
44446527Cullin family
651064839FAD binding domain
2232114446O-methyltransferase domain
46553326EamA-like transporter family
22228
88887847ThiF family
1111116Ribosomal family S4e
35364425Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
11Hepatitis core antigen
33324419Ammonium Transporter Family
44565529Sulfate permease family
1111116MATH domain
22222212Dehydratase family
12141211Transaldolase/Fructose-6-phosphate aldolase
22222212Mechanosensitive ion channel
1221219GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
34344422Adaptor complexes medium subunit family
888791050Exonuclease
22222212Dipeptidyl peptidase IV (DPP IV) N-terminal region
11720139NB-ARC domain
4138116648Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
112Sodium:sulfate symporter transmembrane region
1111116DNA-dependent RNA polymerase
1212118FAD binding domain in molybdopterin dehydrogenase
1112117Glycosyl transferase family 4
22221211HCO3- transporter family
22223213Nucleosome assembly protein (NAP)
54444425Synaptobrevin
1111116GMP synthase C terminal domain
13211210Phage lysozyme
325LAGLIDADG endonuclease
35333320Adenosine/AMP deaminase
46444426Oxidoreductase FAD-binding domain
6118Thioesterase domain
22222212Histidine biosynthesis protein
33333318Glycosyltransferase family 20
1111127UDP-glucose/GDP-mannose dehydrogenase family, central domain
22422214Carbamoyl-phosphate synthase small chain, CPSase domain
22PAS fold
22222212Probable molybdopterin binding domain
44453424Sec1 family
22222212GDP dissociation inhibitor
55555530Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
44443423Initiation factor 2 subunit family
11PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
1111116Uricase
1113118Ribosomal S3Ae family
1111116Ribosomal L27 protein
1111116GTP1/OBG
33232215Gamma-glutamyltranspeptidase
11114Ribosomal L40e family
1111116GrpE
32233316TatD related DNase
121121</