PFAM Domains • Boletus edulis BED1 v4.0
Annotations/GenomesBoled5Boledp1Gyrli1Hydpi2Paxru2Xerba1TotalAnnotation Description
PFAMs
11,13711,0417,2708,1997,0068,14752,800
414141414241247ATPase family associated with various cellular activities (AAA)
363735533638235ABC transporter
44544425ATP synthase alpha/beta family, nucleotide-binding domain
15171414131386Elongation factor Tu GTP binding domain
13151111111071Helix-loop-helix DNA-binding domain
19155591366Hsp20/alpha crystallin family
8108872364Hsp70 protein
88888848KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
11114SH2 domain
161725322726143SH3 domain
10111310101266Actin
6436394651182Ankyrin repeat
1616899765ADP-ribosylation factor family
4952175392238375Eukaryotic aspartyl protease
43333319Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11114Cytochrome c
861078746Double-stranded RNA binding motif
11717151868EF hand
111144Fe-4S binding domain
111115Fibronectin type III domain
11101224101481Glutathione S-transferase, C-terminal domain
1111116Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1712111091170Homeodomain
323102222lactate/malate dehydrogenase, NAD binding domain
443067613106Myosin head (motor domain)
112Neuraminidase
14414798129112151781Cytochrome P450
2132101591621581751,077Protein kinase domain
991323111580Pyridine nucleotide-disulphide oxidoreductase
292623252326152Ras family
56796639Response regulator receiver domain
7141412846RNase H
595962666263371RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1111116Copper/zinc superoxide dismutase (SODC)
136222530Iron/manganese superoxide dismutases, alpha-hairpin domain
88222224Subtilase family
545029432334233Sugar (and other) transporter
15111212111677Thioredoxin
88555536Tubulin/FtsZ family, GTPase domain
1445822von Willebrand factor type A domain
262955546471299Zinc finger, C2H2 type
111459565859257Zinc finger, C3HC4 type (RING finger)
681823152292Zinc knuckle
22322213Protein-tyrosine phosphatase
737049864557380short chain dehydrogenase
343523331628169Zinc-binding dehydrogenase
87453532Thiolase, N-terminal domain
33674427Beta-ketoacyl synthase, N-terminal domain
113333142Fe-2S iron-sulfur cluster binding domain
1111116Enolase, C-terminal TIM barrel domain
1113Cytochrome C and Quinol oxidase polypeptide I
109788951Glutamine amidotransferase class-I
14121011102077TCP-1/cpn60 chaperonin family
33334420Glutamine synthetase, catalytic domain
1112128Triosephosphate isomerase
15211112121384E1-E2 ATPase
211621211817114Core histone H2A/H2B/H3/H4
77776640Alpha amylase, catalytic domain
43665428Phorbol esters/diacylglycerol binding domain (C1 domain)
33434219Bacterial transferase hexapeptide (six repeats)
75444428tRNA synthetases class I (I, L, M and V)
1212109101164Cyclin, N-terminal domain
212114252016117Carboxylesterase family
97444432DNA polymerase family B
33333318ATP synthase subunit C
1111116Peroxidase
4513215Beta-lactamase
54444425C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
323228343130187Calcineurin-like phosphoesterase
17187149873Cellulase (glycosyl hydrolase family 5)
55565531tRNA synthetases class II (D, K and N)
425038393636241Mitochondrial carrier protein
112recA bacterial DNA recombination protein
191716201719108Aminotransferase class I and II
65667838Phosphoribosyl transferase domain
18151414121891Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
23222213Ribosomal protein S12/S23
2211118Chaperonin 10 Kd subunit
11131214121375C2 domain
14121919181698PH domain
810665540bZIP transcription factor
222215191115104Aldehyde dehydrogenase family
585453525358328Fungal Zn(2)-Cys(6) binuclear cluster domain
332626242430163Cytochrome b5-like Heme/Steroid binding domain
32332215Oxidoreductase molybdopterin binding domain
881087849Oxidoreductase NAD-binding domain
292423252422147SNF2 family N-terminal domain
22222212Ribosomal protein S7p/S5e
252423211922134Ubiquitin-conjugating enzyme
56556532Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
22222212Hsp90 protein
22222313Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111217Dihydrofolate reductase
11Chitin recognition protein
22116Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
112217Cupin
443333202-oxoacid dehydrogenases acyltransferase (catalytic domain)
22432215Catalase
35513UDP-glucoronosyl and UDP-glucosyl transferase
56555531Aminotransferase class-III
32222314Ribosomal protein S19
1112117DNA gyrase B
55333322Thiamine pyrophosphate enzyme, central domain
44443423Lyase
1111116Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111116Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
111115Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
991099955Kinesin motor domain
373331303030191DnaJ domain
14161415151488Proteasome subunit
33445423Major intrinsic protein
1111127ATP synthase
54131317Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
32111210Profilin
22222212Ribosomal protein L22p/L17e
32222213Ribosomal protein L14p/L23e
182417151728119Ubiquitin family
96555636Cofilin/tropomyosin-type actin-binding protein
2222231314-3-3 protein
323028482434196Aldo/keto reductase family
651314131263Myb-like DNA-binding domain
78555535Forkhead domain
3211119Ribosomal protein L16p/L10e
32222213Ribosomal protein S14p/S29e
43333420FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
11226
46555833Flavodoxin
1111116Calreticulin family
33465122Common central domain of tyrosinase
88675741Aminotransferase class-V
42226420Ribonucleotide reductase, small chain
746751526750361DEAD/DEAH box helicase
9898818910987562Helicase conserved C-terminal domain
1111116Fructose-bisphosphate aldolase class-I
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
32222213Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111116Ribosomal protein L5
55332321Pyridoxal-dependent decarboxylase conserved domain
55232320Citrate synthase, C-terminal domain
57555532GHMP kinases N terminal domain
96675841Biotin carboxylase, N-terminal domain
33122112Tryptophan synthase alpha chain
910987952Pyridoxal-phosphate dependent enzyme
11'Paired box' domain
15131516151185NUDIX domain
44333421pfkB family carbohydrate kinase
55492328Glycosyl hydrolases family 28
22222212Ribosomal protein L3
12222211Ribosomal protein L11, RNA binding domain
998781152Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
44445425ATP synthase alpha/beta chain, C terminal domain
76444833Calponin homology (CH) domain
22555524Glutamine amidotransferases class-II
22223314Ribosomal protein S15
34151216Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
22222212SRF-type transcription factor (DNA-binding and dimerisation domain)
10910991259GATA zinc finger
111227302634140Amino acid permease
101281391062Prolyl oligopeptidase family
3211119Ribosomal protein L30p/L7e
10101721121787Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44454425Aconitase family (aconitate hydratase)
22131110Glycosyl hydrolase family 10
11114Glycosyl hydrolases family 17
22232213Ribosomal protein S5, N-terminal domain
2211118Nucleoside diphosphate kinase
1214Tetraspanin family
22Galactoside-binding lectin
22222111Ribosomal protein S10p/S20e
44353625Arrestin (or S-antigen), N-terminal domain
1111116Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1211117SecY translocase
1111149Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
97555738Polyprenyl synthetase
22222212Hexokinase
131010810657Dynamin family
2111117Transcription factor TFIID (or TATA-binding protein, TBP)
11344215Rieske [2Fe-2S] domain
123Proton-conducting membrane transporter
107897849Biotin-requiring enzyme
2111117Phosphofructokinase
32222213Ribosomal protein S17
1111116Hydroxymethylglutaryl-coenzyme A reductase
22234215FGGY family of carbohydrate kinases, N-terminal domain
87889747Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
33222214Transcription factor TFIIB repeat
910798851Cytidine and deoxycytidylate deaminase zinc-binding region
2111117Molybdopterin oxidoreductase
1076713952Chromo (CHRromatin Organisation MOdifier) domain
11222210Phosphatidylinositol-specific phospholipase C, Y domain
32332215Phosphatidylinositol-specific phospholipase C, X domain
55574430D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22332214Malic enzyme, N-terminal domain
11111166-phosphogluconate dehydrogenase, C-terminal domain
11121111171476Multicopper oxidase
11Granulin
10991191159WW domain
22222212Ribosomal RNA adenine dimethylase
1952041823191852941,379WD domain, G-beta repeat
14433318Heavy-metal-associated domain
45444425Adenylate kinase
33121111Phosphoglucomutase/phosphomannomutase, C-terminal domain
2211118Ribosomal protein S8
2211118Ribosomal protein S11
66666636LIM domain
123Matrixin
43232216Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
22223213chorismate binding enzyme
3332221560s Acidic ribosomal protein
55446428Prenyltransferase and squalene oxidase repeat
55887942Protein kinase C terminal domain
1111116Single-strand binding protein family
1112117S-adenosylmethionine synthetase, N-terminal domain
21161010101077Bromodomain
99986849Acyl-CoA dehydrogenase, C-terminal domain
16171516141492Ubiquitin carboxyl-terminal hydrolase
211116Ribosomal protein L36
22221413Ribonuclease T2 family
96544432HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
162110861475Serine carboxypeptidase
88888848Phosphatidylinositol 3- and 4-kinase
22232213Transketolase, thiamine diphosphate binding domain
1111116WHEP-TRS domain
643321028Inositol monophosphatase family
64546429Glutaredoxin
42333318Isocitrate lyase family
1211117Serine hydroxymethyltransferase
22222313Iron-containing alcohol dehydrogenase
22222212Ribosomal protein L10
54444526KOW motif
2112118Ribosomal protein L34
213Ribosomal protein L33
55132218RF-1 domain
69341225Sodium:solute symporter family
1211117Imidazoleglycerol-phosphate dehydratase
1111116DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
877108747Protein phosphatase 2C
33333217Nucleotidyl transferase
22324215Carbonic anhydrase
33111110Phosphoribulokinase / Uridine kinase family
131581391169Fatty acid desaturase
67676638MutS domain V
1211117Delta-aminolevulinic acid dehydratase
33343521Arginase family
66666636MCM P-loop domain
22113110Squalene/phytoene synthase
910119101160FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
243529412838195AMP-binding enzyme
16161215191391G-protein alpha subunit
262115161616110HMG (high mobility group) box
12353216His Kinase A (phospho-acceptor) domain
22233315Armadillo/beta-catenin-like repeat
3220303326107248Tetratricopeptide repeat
46222420Ion transport protein
1112117DNA gyrase/topoisomerase IV, subunit A
108101091158BRCA1 C Terminus (BRCT) domain
729666559Glycosyl transferases group 1
42444321Glycosyl transferase family 2
1111116SAM domain (Sterile alpha motif)
33343319linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
178ribonuclease
1111116Urease, gamma subunit
33333318CoA-ligase
999147856Phosphopantetheine attachment site
79222224Formyl transferase
121291091163Metallopeptidase family M24
541618151674Leucine Rich Repeat
7532342330131alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
87645535PB1 domain
22222212Staphylococcal nuclease homologue
1315111091068Rab-GTPase-TBC domain
1111116Tudor domain
22222212WH1 domain
33333318Zinc finger, ZZ type
1111116HRDC domain
66898845CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
44544425S1 RNA binding domain
1111116HIUase/Transthyretin family
44555427AhpC/TSA family
1416454548tRNA synthetases class I (W and Y)
221218UvrD/REP helicase N-terminal domain
913444438Rhodanese-like domain
23222213Universal stress protein family
171527342332148Acetyltransferase (GNAT) family
2111117SecE/Sec61-gamma subunits of protein translocation complex
1131219C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
55666634tRNA synthetase class II core domain (G, H, P, S and T)
22232314Tetrapyrrole (Corrin/Porphyrin) Methylases
1121117Glycosyl transferase family, a/b domain
1122219Class II Aldolase and Adducin N-terminal domain
45333321Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55555631Fes/CIP4, and EFC/F-BAR homology domain
23333317IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
22443419Phospholipase D Active site motif
2311119Regulator of G protein signaling domain
44454425GTPase-activator protein for Ras-like GTPase
89666641RasGEF domain
67777741RasGEF N-terminal motif
11151316131381RhoGAP domain
17151214131384RhoGEF domain
44544324SPRY domain
35344322RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
32342418Gelsolin repeat
767871045UBA/TS-N domain
151618172017103PHD-finger
42111110GGL domain
55555732HECT-domain (ubiquitin-transferase)
11222311Helix-hairpin-helix motif
1111127MSP (Major sperm protein) domain
44989640Ribonuclease III domain
34222215Region in Clathrin and VPS
33333318RanBP1 domain
22222212PPIC-type PPIASE domain
12124313Zn-finger in Ran binding protein and others
141425242426127Zinc finger C-x8-C-x5-C-x3-H type (and similar)
21115B-box zinc finger
66444529Poly(ADP-ribose) polymerase catalytic domain
22222212Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
454260745283356F-box domain
1111116Elongation factor 1 gamma, conserved domain
1111116Calpain family cysteine protease
22222212Copper fist DNA binding domain
66676839CRAL/TRIO domain
262816211428133BTB/POZ domain
1315Ricin-type beta-trefoil lectin domain
1211117Inhibitor of Apoptosis domain
22222212Voltage gated chloride channel
141481061062Caspase domain
75151221GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
1211117POLO box duplicated region
15121422111488ABC transporter transmembrane region
22Integrase core domain
34333319FAD binding domain
11554218Condensation domain
2211118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111116HAMP domain
22222212ribosomal L5P family C-terminus
77565636Insulinase (Peptidase family M16)
55555732Dehydrogenase E1 component
1111116Lumazine binding domain
67666637Elongation factor G C-terminus
54445426HMGL-like
45444425DnaJ central domain
22221211Starch binding domain
33222214Ribosomal protein L1p/L10e family
88565537Cation transporting ATPase, C-terminus
810765743Cation transporter/ATPase, N-terminus
1111116dUTPase
55454427Aconitase C-terminal domain
56333525Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
54674430Acyl transferase domain
1111116Urease beta subunit
22221110Dihydrodipicolinate synthetase family
121725272428133haloacid dehalogenase-like hydrolase
1112117Glycosyl hydrolases family 2
1112911131268Glycosyl hydrolases family 18
1211117Proliferating cell nuclear antigen, N-terminal domain
112Translation initiation factor IF-3, C-terminal domain
2211129Adenylosuccinate synthetase
1111116Asparaginase, N-terminal
33232215Peptidase S24-like
1111116Inorganic pyrophosphatase
1312443339Glycosyl hydrolases family 16
44222418Glycosyl hydrolases family 15
20175154566NADH:flavin oxidoreductase / NADH oxidase family
11111163-hydroxyacyl-CoA dehydrogenase, C-terminal domain
56542325Glycosyl hydrolase family 20, catalytic domain
65676535HhH-GPD superfamily base excision DNA repair protein
1111116AIR carboxylase
141791271271GMC oxidoreductase
22222212Asparagine synthase
1111619Fungal cellulose binding domain
77666638Septin
1112117EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
78342529Flavin-binding monooxygenase-like
33333318tRNA synthetases class I (E and Q), catalytic domain
2211118tRNA synthetases class I (R)
1314648651XPG N-terminal domain
9881591261Metallo-beta-lactamase superfamily
1113F5/8 type C domain
2111444549Choline/Carnitine o-acyltransferase
2111117Putative esterase
111115Glycosyl hydrolase family 9
1111116Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111127Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33343319RNB domain
22142314Dioxygenase
56333424CNH domain
23221212Diacylglycerol kinase catalytic domain
16191212111383Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
33333520P21-Rho-binding domain
14141314121380PX domain
43353422Ras association (RalGDS/AF-6) domain
55443425UBX domain
55574531VHS domain
1111116Phosphoinositide 3-kinase C2
22222212DAHP synthetase I family
46443425Carbon-nitrogen hydrolase
1111116Prephenate dehydratase
44555528Syntaxin
1314555648Pumilio-family RNA binding repeat
1011777648Histone-like transcription factor (CBF/NF-Y) and archaeal histone
2311119Pterin binding enzyme
1111116ER lumen protein retaining receptor
22222212Glycoprotease family
1111116Histidinol dehydrogenase
35333320impB/mucB/samB family
31127
1111116Ribosomal L15
43111111Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
211116Ribosomal L39 protein
1111116Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
44Glycosyl hydrolase family 7
22222212RNA pseudouridylate synthase
810666642Histone deacetylase domain
2211118POT family
22212211PWWP domain
18171318101389SET domain
54433322Isochorismatase family
22222212Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
171814717578XPG I-region
1111116Acetokinase family
1112117DNA photolyase
1111116Cation-independent mannose-6-phosphate receptor repeat
1111116Cytosol aminopeptidase family, catalytic domain
112Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
33333318Acyl CoA binding protein
12137106856Cullin family
1111116Elongation factor TS
55472528FAD binding domain
46474328O-methyltransferase domain
23353319EamA-like transporter family
22228
1012777851ThiF family
1111116Ribosomal family S4e
1111116Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
44222317Ammonium Transporter Family
54385328Sulfate permease family
2212119MATH domain
23222213Dehydratase family
33353320Transaldolase/Fructose-6-phosphate aldolase
22222212Mechanosensitive ion channel
2211118GTP cyclohydrolase II
11111273,4-dihydroxy-2-butanone 4-phosphate synthase
45555428Adaptor complexes medium subunit family
87777844Exonuclease
1111116Dipeptidyl peptidase IV (DPP IV) N-terminal region
112NB-ARC domain
674134741Glycosyl hydrolase family 3 N terminal domain
2211118Ribosomal protein L44
213Sodium:sulfate symporter transmembrane region
25111212DNA-dependent RNA polymerase
1111116Glycosyl transferase family 4
1111217HCO3- transporter family
23222213Nucleosome assembly protein (NAP)
54444425Synaptobrevin
1111116GMP synthase C terminal domain
33452421Adenosine/AMP deaminase
213Barwin family
54544426Oxidoreductase FAD-binding domain
346124736Thioesterase domain
22222212Histidine biosynthesis protein
53333320Glycosyltransferase family 20
1111217UDP-glucose/GDP-mannose dehydrogenase family, central domain
32222213Carbamoyl-phosphate synthase small chain, CPSase domain
112PAS fold
22222313Probable molybdopterin binding domain
44444424Sec1 family
33232215GDP dissociation inhibitor
55656734Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
54444526Initiation factor 2 subunit family
1225PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
1111116Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
2111117GTP1/OBG
22222212Gamma-glutamyltranspeptidase
11114Ribosomal L40e family
1111116GrpE
33232316TatD related DNase
2211129Inhibitor of apoptosis-promoting Bax1
1211117Eukaryotic DNA topoisomerase I, catalytic core
118426334Dynamin central region
763544296-O-methylguanine DNA methyltransferase, DNA binding domain
1111116Bacteriorhodopsin-like protein
22232213Carboxyl transferase domain
791078647UbiA prenyltransferase family
63846431Endoribonuclease L-PSP
3519Phosphorylase superfamily
11114Mannose-6-phosphate isomerase
1314668653Cys/Met metabolism PLP-dependent enzyme
54462324Glycosyl hydrolases family 31
1112117NADH ubiquinone oxidoreductase, 20 Kd subunit
446117739ABC-2 type transporter
112Bestrophin, RFP-TM, chloride channel
34232216Amino-transferase class IV
55444729CDP-alcohol phosphatidyltransferase
112Calpain large subunit, domain III
88444432ATP dependent DNA ligase domain
65664633FMN-dependent dehydrogenase
1111116Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
341111113-beta hydroxysteroid dehydrogenase/isomerase family
2211118Glycosyl hydrolases family 38 N-terminal domain
22222212Nitrite and sulphite reductase 4Fe-4S domain
1111116Ribosomal protein S18
211217Clathrin light chain
1112117Galactose-1-phosphate uridyl transferase, N-terminal domain
32222213Ubiquitin carboxyl-terminal hydrolase, family 1
1111116Ribosomal protein S19e
1111116Ribosomal protein S6e
3222110Pectinesterase
753533