PFAM Domains • Paxillus ammoniavirescens Pou09.2 v1.0
Annotations/GenomesBoled1Gyrli1Hydpi2Paxam1Paxin1Paxru1TotalAnnotation Description
PFAMs
7,9317,2708,1997,6698,9487,16947,186
384141414542248ATPase family associated with various cellular activities (AAA)
313553374734237ABC transporter
45444425ATP synthase alpha/beta family, nucleotide-binding domain
14141414141383Elongation factor Tu GTP binding domain
12111111101166Helix-loop-helix DNA-binding domain
135566843Hsp20/alpha crystallin family
78879746Hsp70 protein
78888847KH domain
1111116SH2 domain
262532272627163SH3 domain
10131010111064Actin
663639499852340Ankyrin repeat
118989853ADP-ribosylation factor family
4217539273422339Eukaryotic aspartyl protease
33333318Cyclic nucleotide-binding domain
11Cytochrome b/b6/petB
111115Cytochrome c
810798850Double-stranded RNA binding motif
171717181716102EF hand
1111154Fe-4S binding domain
111216Fibronectin type III domain
2012241214890Glutathione S-transferase, C-terminal domain
1111116Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1411101110965Homeodomain
11Laminin EGF domain
231022221lactate/malate dehydrogenase, NAD binding domain
276766658Myosin head (motor domain)
112Neuraminidase
12698129133196112794Cytochrome P450
1711591621942741531,113Protein kinase domain
14132315161192Pyridine nucleotide-disulphide oxidoreductase
262325232422143Ras family
67977642Response regulator receiver domain
14616330RNase H
676266656562387RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
314Reverse transcriptase (RNA-dependent DNA polymerase)
1111116Copper/zinc superoxide dismutase (SODC)
42222214Iron/manganese superoxide dismutases, alpha-hairpin domain
22212211Subtilase family
352943273226192Sugar (and other) transporter
10121211121168Thioredoxin
75555532Tubulin/FtsZ family, GTPase domain
64477432von Willebrand factor type A domain
735554617457374Zinc finger, C2H2 type
615956646158359Zinc finger, C3HC4 type (RING finger)
182314191690Zinc knuckle
23222213Protein-tyrosine phosphatase
634986576344362short chain dehydrogenase
312333222516150Zinc-binding dehydrogenase
44544324Thiolase, N-terminal domain
36769435Beta-ketoacyl synthase, N-terminal domain
333443202Fe-2S iron-sulfur cluster binding domain
1111116Enolase, C-terminal TIM barrel domain
112Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
77899848Glutamine amidotransferase class-I
15101110131069TCP-1/cpn60 chaperonin family
11ATP synthase A chain
33344219Glutamine synthetase, catalytic domain
1121117Triosephosphate isomerase
14111213171279E1-E2 ATPase
162121212019118Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
67766638Alpha amylase, catalytic domain
56666433Phorbol esters/diacylglycerol binding domain (C1 domain)
34344422Bacterial transferase hexapeptide (six repeats)
74454428tRNA synthetases class I (I, L, M and V)
10109991057Cyclin, N-terminal domain
221425224115139Carboxylesterase family
24445423DNA polymerase family B
53333320ATP synthase subunit C
1111217Peroxidase
6131112Beta-lactamase
44444424C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
322834323130187Calcineurin-like phosphoesterase
107141191061Cellulase (glycosyl hydrolase family 5)
55657533tRNA synthetases class II (D, K and N)
353839384334227Mitochondrial carrier protein
161620181917106Aminotransferase class I and II
76678741Phosphoribosyl transferase domain
15141413161284Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
1111116Chaperonin 10 Kd subunit
13121412141277C2 domain
191919191718111PH domain
56655532bZIP transcription factor
17151916181196Aldehyde dehydrogenase family
595352606054338Fungal Zn(2)-Cys(6) binuclear cluster domain
292624304124174Cytochrome b5-like Heme/Steroid binding domain
23321213Oxidoreductase molybdopterin binding domain
710888647Oxidoreductase NAD-binding domain
242325222322139SNF2 family N-terminal domain
22222212Ribosomal protein S7p/S5e
222321202119126Ubiquitin-conjugating enzyme
55567634Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
22222212Hsp90 protein
22221211Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111127Dihydrofolate reductase
11Chitin recognition protein
221117Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
221117Cupin
11Annexin
333333182-oxoacid dehydrogenases acyltransferase (catalytic domain)
24334218Catalase
11UDP-glucoronosyl and UDP-glucosyl transferase
55555530Aminotransferase class-III
22222212Ribosomal protein S19
1121117DNA gyrase B
43325320Thiamine pyrophosphate enzyme, central domain
44444323Lyase
1111116Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111116Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
1111116Indole-3-glycerol phosphate synthase
1111116Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
910999955Kinesin motor domain
293130293730186DnaJ domain
14141514161487Proteasome subunit
34444423Major intrinsic protein
1111217ATP synthase
61313115Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
2111117Profilin
22222212Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
251715203119127Ubiquitin family
65555531Cofilin/tropomyosin-type actin-binding protein
2222321314-3-3 protein
302848312924190Aldo/keto reductase family
13131413121277Myb-like DNA-binding domain
65555531Forkhead domain
1111116Ribosomal protein L16p/L10e
22222212Ribosomal protein S14p/S29e
33334319FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
1112229
75565533Flavodoxin
1111116Calreticulin family
346914541Common central domain of tyrosinase
56766535Aminotransferase class-V
42221516Ribonucleotide reductase, small chain
585152507257340DEAD/DEAH box helicase
97818986110100563Helicase conserved C-terminal domain
1111116Fructose-bisphosphate aldolase class-I
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222212Ribosomal protein L23
1111217Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111116Ribosomal protein L5
43325219Pyridoxal-dependent decarboxylase conserved domain
32323215Citrate synthase, C-terminal domain
55554529GHMP kinases N terminal domain
76766537Biotin carboxylase, N-terminal domain
11232211Tryptophan synthase alpha chain
998911753Pyridoxal-phosphate dependent enzyme
12151615151588NUDIX domain
43333319pfkB family carbohydrate kinase
44943226Glycosyl hydrolases family 28
22222212Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
98789849Histidine phosphatase superfamily (branch 1)
1111217Thymidylate synthase
44445425ATP synthase alpha/beta chain, C terminal domain
54446427Calponin homology (CH) domain
55555530Glutamine amidotransferases class-II
22222313Ribosomal protein S15
21513113Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1111116Ribonucleotide reductase, all-alpha domain
22223213Ribosomal protein S2
22222212SRF-type transcription factor (DNA-binding and dimerisation domain)
8109991055GATA zinc finger
232730374525187Amino acid permease
9813911959Prolyl oligopeptidase family
1111116Ribosomal protein L30p/L7e
121721172212101Histidine phosphatase superfamily (branch 2)
111115Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44545426Aconitase family (aconitate hydratase)
2131119Glycosyl hydrolase family 10
1111116Glycosyl hydrolases family 17
22322213Ribosomal protein S5, N-terminal domain
1111116Nucleoside diphosphate kinase
121116Tetraspanin family
22222212Ribosomal protein S10p/S20e
53546225Arrestin (or S-antigen), N-terminal domain
2111218Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1111116SecY translocase
1111116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
55587535Polyprenyl synthetase
22222212Hexokinase
610810121056Dynamin family
1112117Transcription factor TFIID (or TATA-binding protein, TBP)
23443420Rieske [2Fe-2S] domain
112Proton-conducting membrane transporter
78986745Biotin-requiring enzyme
2111218Phosphofructokinase
22222212Ribosomal protein S17
1111116Hydroxymethylglutaryl-coenzyme A reductase
22324417FGGY family of carbohydrate kinases, N-terminal domain
788613951Enoyl-CoA hydratase/isomerase
11Insect cuticle protein
22222212Ribosomal protein S9/S16
32232214Transcription factor TFIIB repeat
87988848Cytidine and deoxycytidylate deaminase zinc-binding region
2111117Molybdopterin oxidoreductase
106712181063Chromo (CHRromatin Organisation MOdifier) domain
12223212Phosphatidylinositol-specific phospholipase C, Y domain
13323214Phosphatidylinositol-specific phospholipase C, X domain
55767434D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
23322214Malic enzyme, N-terminal domain
11111166-phosphogluconate dehydrogenase, C-terminal domain
10111115151779Multicopper oxidase
11911711958WW domain
12222211Ribosomal RNA adenine dimethylase
2901823193384781771,784WD domain, G-beta repeat
44345323Heavy-metal-associated domain
44444424Adenylate kinase
2121118Phosphoglucomutase/phosphomannomutase, C-terminal domain
1111116Ribosomal protein S8
1111116Ribosomal protein S11
66666636LIM domain
11Matrixin
22322213Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
112NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22235317chorismate binding enzyme
3321221360s Acidic ribosomal protein
54476834Prenyltransferase and squalene oxidase repeat
98877746Protein kinase C terminal domain
1111116Single-strand binding protein family
1121117S-adenosylmethionine synthetase, N-terminal domain
14101010101064Bromodomain
79888646Acyl-CoA dehydrogenase, C-terminal domain
14151614151488Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
22222111Ribonuclease T2 family
65444427HSF-type DNA-binding
22223213SRP54-type protein, GTPase domain
1111217Urease alpha-subunit, N-terminal domain
161081010660Serine carboxypeptidase
88888848Phosphatidylinositol 3- and 4-kinase
22322213Transketolase, thiamine diphosphate binding domain
1111116WHEP-TRS domain
43322216Inositol monophosphatase family
55476633Glutaredoxin
33333318Isocitrate lyase family
1112218Serine hydroxymethyltransferase
22223213Iron-containing alcohol dehydrogenase
22222212Ribosomal protein L10
24445423KOW motif
1121117Ribosomal protein L34
31322213RF-1 domain
33432116Sodium:solute symporter family
2111117Imidazoleglycerol-phosphate dehydratase
111115DNA polymerase family A
1111318IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
771089849Protein phosphatase 2C
23333317Nucleotidyl transferase
23244419Carbonic anhydrase
1111116Phosphoribulokinase / Uridine kinase family
138131526984Fatty acid desaturase
66766637MutS domain V
1111116Delta-aminolevulinic acid dehydratase
33454322Arginase family
66666636MCM P-loop domain
1111228Squalene/phytoene synthase
11119981058FHA domain
252941344730206AMP-binding enzyme
18121512131686G-protein alpha subunit
20151616151698HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
13534319His Kinase A (phospho-acceptor) domain
32333317Armadillo/beta-catenin-like repeat
463033262626187Tetratricopeptide repeat
72222217Ion transport protein
1121117DNA gyrase/topoisomerase IV, subunit A
12101099959BRCA1 C Terminus (BRCT) domain
76666637Glycosyl transferases group 1
34443422Glycosyl transferase family 2
1111116SAM domain (Sterile alpha motif)
33423318linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
178ribonuclease
111115Urease, gamma subunit
33334319CoA-ligase
7914911757Phosphopantetheine attachment site
42233216Formyl transferase
10910910957Metallopeptidase family M24
17161818141598Leucine Rich Repeat
293234262623170alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
56455530PB1 domain
22222212Staphylococcal nuclease homologue
1111101111963Rab-GTPase-TBC domain
1111116Tudor domain
22222212WH1 domain
33333318Zinc finger, ZZ type
111115HRDC domain
989911854CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
45446427S1 RNA binding domain
111115HIUase/Transthyretin family
45556530AhpC/TSA family
94544430tRNA synthetases class I (W and Y)
121116UvrD/REP helicase N-terminal domain
44444424Rhodanese-like domain
12213211Universal stress protein family
302734262322162Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
13133213C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
66666636tRNA synthetase class II core domain (G, H, P, S and T)
1315Phage integrase family
22322213Tetrapyrrole (Corrin/Porphyrin) Methylases
1211117Glycosyl transferase family, a/b domain
12222211Class II Aldolase and Adducin N-terminal domain
33334319Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55545529Fes/CIP4, and EFC/F-BAR homology domain
43334320IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
44444323Phospholipase D Active site motif
1111116Regulator of G protein signaling domain
44546427GTPase-activator protein for Ras-like GTPase
66666636RasGEF domain
77779744RasGEF N-terminal motif
11Caspase recruitment domain
12131612131379RhoGAP domain
14121414151382RhoGEF domain
45444425SPRY domain
33456324RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
33433218Gelsolin repeat
97877745UBA/TS-N domain
181817191619107PHD-finger
111115GGL domain
55555530HECT-domain (ubiquitin-transferase)
42222214Helix-hairpin-helix motif
1111116MSP (Major sperm protein) domain
79889950Ribonuclease III domain
22222212Region in Clathrin and VPS
33333318RanBP1 domain
22222212PPIC-type PPIASE domain
41243317Zn-finger in Ran binding protein and others
212524232125139Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11215B-box zinc finger
44445324Poly(ADP-ribose) polymerase catalytic domain
22222212Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
996074617751422F-box domain
1111116Elongation factor 1 gamma, conserved domain
111115Calpain family cysteine protease
22222212Copper fist DNA binding domain
66776638CRAL/TRIO domain
151621122914107BTB/POZ domain
513110Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
22222212Voltage gated chloride channel
1381076953Caspase domain
71543121GDSL-like Lipase/Acylhydrolase
1111116Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
11142220161194ABC transporter transmembrane region
240749Integrase core domain
33343319FAD binding domain
25544424Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111116HAMP domain
22222212ribosomal L5P family C-terminus
65665533Insulinase (Peptidase family M16)
55557532Dehydrogenase E1 component
1111116Lumazine binding domain
66666636Elongation factor G C-terminus
44456528HMGL-like
44444424DnaJ central domain
222219Starch binding domain
22222212Ribosomal protein L1p/L10e family
55658534Cation transporting ATPase, C-terminus
77667538Cation transporter/ATPase, N-terminus
1111116dUTPase
34545425Aconitase C-terminal domain
33334319Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
46767434Acyl transferase domain
1111116Urease beta subunit
22222111Dihydrodipicolinate synthetase family
262527252824155haloacid dehalogenase-like hydrolase
1121117Glycosyl hydrolases family 2
1291113131573Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
2111218Adenylosuccinate synthetase
1111116Asparaginase, N-terminal
22322213Peptidase S24-like
1111116Inorganic pyrophosphatase
34433320Glycosyl hydrolases family 16
12234214Glycosyl hydrolases family 15
1351569452NADH:flavin oxidoreductase / NADH oxidase family
11113183-hydroxyacyl-CoA dehydrogenase, C-terminal domain
45436224Glycosyl hydrolase family 20, catalytic domain
56766636HhH-GPD superfamily base excision DNA repair protein
1111217AIR carboxylase
14912771059GMC oxidoreductase
22222212Asparagine synthase
111618Fungal cellulose binding domain
66666636Septin
1121117EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
33444220Flavin-binding monooxygenase-like
33333318tRNA synthetases class I (E and Q), catalytic domain
2111117tRNA synthetases class I (R)
56465632XPG N-terminal domain
98151010860Metallo-beta-lactamase superfamily
11F5/8 type C domain
74444427Choline/Carnitine o-acyltransferase
1111116Putative esterase
1111318Glycosyl hydrolase family 9
1111116Ferrochelatase
32222213Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33433319RNB domain
21433215Dioxygenase
33345321CNH domain
22222111Diacylglycerol kinase catalytic domain
13121213141175Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
33334319P21-Rho-binding domain
13131413121277PX domain
33533320Ras association (RalGDS/AF-6) domain
34444322UBX domain
55755431VHS domain
1111116Phosphoinositide 3-kinase C2
22222212DAHP synthetase I family
44444323Carbon-nitrogen hydrolase
11Geminivirus Rep catalytic domain
1111116Prephenate dehydratase
55576533Syntaxin
65555531Pumilio-family RNA binding repeat
87778744Histone-like transcription factor (CBF/NF-Y) and archaeal histone
2111117Pterin binding enzyme
1111116ER lumen protein retaining receptor
22222212Glycoprotease family
1111116Histidinol dehydrogenase
33333318impB/mucB/samB family
1311219
1111116Ribosomal L15
1111116Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1111318Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
44Glycosyl hydrolase family 7
22222212RNA pseudouridylate synthase
66667637Histone deacetylase domain
2111117POT family
22122211PWWP domain
15131813121081SET domain
34344321Isochorismatase family
22224214Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
914710211374XPG I-region
1111217Acetokinase family
1121117DNA photolyase
1111116Cation-independent mannose-6-phosphate receptor repeat
1111116Cytosol aminopeptidase family, catalytic domain
111115Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
33323317Acyl CoA binding protein
971088648Cullin family
1111116Elongation factor TS
44745226FAD binding domain
44786433O-methyltransferase domain
23544321EamA-like transporter family
22222212
137777748ThiF family
1111116Ribosomal family S4e
1111116Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
22222212Ammonium Transporter Family
43845428Sulfate permease family
1121117MATH domain
22222212Dehydratase family
33533320Transaldolase/Fructose-6-phosphate aldolase
22222212Mechanosensitive ion channel
1111116GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
45544527Adaptor complexes medium subunit family
17777736Exonuclease
2111117Dipeptidyl peptidase IV (DPP IV) N-terminal region
112NB-ARC domain
641344435Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
11Sodium:sulfate symporter transmembrane region
3111219DNA-dependent RNA polymerase
1111116Glycosyl transferase family 4
111238HCO3- transporter family
22222212Nucleosome assembly protein (NAP)
44444424Synaptobrevin
1111217GMP synthase C terminal domain
14523217Adenosine/AMP deaminase
45444425Oxidoreductase FAD-binding domain
26121010444Thioesterase domain
22222212Histidine biosynthesis protein
33333318Glycosyltransferase family 20
1112117UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
11PAS fold
22222212Probable molybdopterin binding domain
44454425Sec1 family
22322213GDP dissociation inhibitor
56567635Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
44444424Initiation factor 2 subunit family
2125PQQ enzyme repeat
22223213Electron transfer flavoprotein domain
1111116Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
2111117GTP1/OBG
22222212Gamma-glutamyltranspeptidase
112Ribosomal L40e family
1111116GrpE
32333216TatD related DNase
1111116Inhibitor of apoptosis-promoting Bax1
1111116Eukaryotic DNA topoisomerase I, catalytic core
44258629Dynamin central region
435444246-O-methylguanine DNA methyltransferase, DNA binding domain
111115Bacteriorhodopsin-like protein
22322213Carboxyl transferase domain
610767844UbiA prenyltransferase family
48488537Endoribonuclease L-PSP
1111116Mannose-6-phosphate isomerase
1266914855Cys/Met metabolism PLP-dependent enzyme
44625223Glycosyl hydrolases family 31
1121117NADH ubiquinone oxidoreductase, 20 Kd subunit
561168743ABC-2 type transporter
42345220Amino-transferase class IV
54444425CDP-alcohol phosphatidyltransferase
54444425ATP dependent DNA ligase domain
56656432FMN-dependent dehydrogenase
1111116Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
31111183-beta hydroxysteroid dehydrogenase/isomerase family
1111318Glycosyl hydrolases family 38 N-terminal domain
22222212Nitrite and sulphite reductase 4Fe-4S domain
1111116Ribosomal protein S18