PFAM Domains • Rhizoscyphus ericae UAMH 7357 v1.0
Annotations/GenomesAmore1Ascsa1Blugr1Botci1Cadsp1Chalo1Glalo1Melbi2Melva1Oidma1Rhier1Sclsc1TotalAnnotation Description
PFAMs
7,3268,0685,0877,96114,03212,9829,20011,47113,38412,26910,1157,957119,852
11137 transmembrane receptor (rhodopsin family)
405232466771597568595639664ATPase family associated with various cellular activities (AAA)
364720528284506471755545681ABC transporter
44444444444448ATP synthase alpha/beta family, nucleotide-binding domain
141414121614141414141414168Elongation factor Tu GTP binding domain
101479181913162015199169Helix-loop-helix DNA-binding domain
241729564555266Hsp20/alpha crystallin family
877812798798797Hsp70 protein
8991013121010128129122KH domain
11111111111112SH2 domain
242224232727242926232723299SH3 domain
10101071010111010101010118Actin
32811966194183105255207148155471,492Ankyrin repeat
336646654447PAN domain
78777777777785ADP-ribosylation factor family
12135162650182442322710275Eukaryotic aspartyl protease
44345444444448Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
11111211111113Cytochrome c
2221232322324Double-stranded RNA binding motif
191716202421191721182020232EF hand
122211211112174Fe-4S binding domain
32228422332235Fibronectin type III domain
1111116Globin
7133152631132131332112226Glutathione S-transferase, C-terminal domain
11121112311116Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
112Hemopexin
76471311781178796Homeodomain
22224324333232lactate/malate dehydrogenase, NAD binding domain
45555554655559Myosin head (motor domain)
654412114214232131168221170113841,568Cytochrome P450
12012081951901551391801591281581081,633Protein kinase domain
14207193833202537292114277Pyridine nucleotide-disulphide oxidoreductase
232322213429253330302825323Ras family
161812212931202530162722267Response regulator receiver domain
369315333459108RNase H
636255586966626868556158745RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
17197097Reverse transcriptase (RNA-dependent DNA polymerase)
111216Serpin (serine protease inhibitor)
1222222222221Copper/zinc superoxide dismutase (SODC)
21212111233120Iron/manganese superoxide dismutases, alpha-hairpin domain
254436191013171385136Subtilase family
4761137020615968138190154104551,265Sugar (and other) transporter
1112129131611141411139145Thioredoxin
11113122232221Trypsin
44454444464451Tubulin/FtsZ family, GTPase domain
33225669645253von Willebrand factor type A domain
526631501481517213914594116541,118Zinc finger, C2H2 type
414831376559565971485139605Zinc finger, C3HC4 type (RING finger)
78132981175864160Zinc knuckle
33232322232330Protein-tyrosine phosphatase
11Somatotropin hormone family
8013319108303271150175264256136791,974short chain dehydrogenase
4157659144135859413313461541,003Zinc-binding dehydrogenase
66358777777575Thiolase, N-terminal domain
853222530343220501322264Beta-ketoacyl synthase, N-terminal domain
533488688484692Fe-2S iron-sulfur cluster binding domain
1113Papain family cysteine protease
13121212232121Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
798810897878897Glutamine amidotransferase class-I
101010101110101010101010121TCP-1/cpn60 chaperonin family
33237535654349Glutamine synthetase, catalytic domain
21112222222120Triosephosphate isomerase
14138142318142319161712191E1-E2 ATPase
88891010898988103Core histone H2A/H2B/H3/H4
11211129Copper binding proteins, plastocyanin/azurin family
463878571057979Alpha amylase, catalytic domain
22222232212224Phorbol esters/diacylglycerol binding domain (C1 domain)
879877108997796Bacterial transferase hexapeptide (six repeats)
33353333333439tRNA synthetases class I (I, L, M and V)
768611776777685Cyclin, N-terminal domain
11177378358224362643016450Carboxylesterase family
444544444441DNA polymerase family B
45446646656460ATP synthase subunit C
34339675554357Peroxidase
56633297252637144192Beta-lactamase
44165624548554C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
282717242934243536302920333Calcineurin-like phosphoesterase
8161102632131927171913201Cellulase (glycosyl hydrolase family 5)
77778777898789tRNA synthetases class II (D, K and N)
373632354741384141424136467Mitochondrial carrier protein
11111117recA bacterial DNA recombination protein
14129202620151620241414204Aminotransferase class I and II
7689101191191198108Phosphoribosyl transferase domain
101010111010101010101010121Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111111112Phosphoglycerate kinase
22222222222224Ribosomal protein S4/S9 N-terminal domain
22322222222225Ribosomal protein S12/S23
121111111111Bacterial regulatory helix-turn-helix proteins, AraC family
11111111111112Chaperonin 10 Kd subunit
91091019161514169138148C2 domain
181918151919181919171917217PH domain
1088712101011112098124bZIP transcription factor
18168153629212638452013285Aldehyde dehydrogenase family
15218028109483527191329554469258933,373Fungal Zn(2)-Cys(6) binuclear cluster domain
222014173327202526372420285Cytochrome b5-like Heme/Steroid binding domain
2126333323230Oxidoreductase molybdopterin binding domain
16136142520151718181511188Oxidoreductase NAD-binding domain
243019273331304238313725367SNF2 family N-terminal domain
22231222222224Ribosomal protein S7p/S5e
202216192424222725222423268Ubiquitin-conjugating enzyme
664610777997583Isocitrate/isopropylmalate dehydrogenase
22222222212223Ribosomal Proteins L2, RNA binding domain
11111111111112Hsp90 protein
22222222232225Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
22121112111116Dihydrofolate reductase
3545101568933778Chitin recognition protein
23136534624342Cysteine-rich secretory protein family
11111111111112Ribosomal protein S3, C-terminal domain
2313744555149Cupin
22121222222121Annexin
1141321114Eukaryotic-type carbonic anhydrase
11112112111114Chalcone and stilbene synthases, N-terminal domain
333333343343382-oxoacid dehydrogenases acyltransferase (catalytic domain)
34278108711118887Catalase
111122122114Disintegrin
21461471228UDP-glucoronosyl and UDP-glucosyl transferase
7746178713101576107Aminotransferase class-III
22222212222223Ribosomal protein S19
11111111111112DNA gyrase B
47241285910149488Thiamine pyrophosphate enzyme, central domain
43334545454347Lyase
22122223332226Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11Sodium:neurotransmitter symporter family
11112212222118Adenylate and Guanylate cyclase catalytic domain
11111111111112ATP synthase delta (OSCP) subunit
11112221211116Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111111112Indole-3-glycerol phosphate synthase
1122113112Aromatic amino acid lyase
11111211111113Pyruvate kinase, barrel domain
81010111212101211101210128Kinesin motor domain
283325313731313534283232377DnaJ domain
141414141414141414141414168Proteasome subunit
36411141391013689106Major intrinsic protein
11111111111112ATP synthase
24584345134355Glycosyl hydrolase family 1
111111111111123'5'-cyclic nucleotide phosphodiesterase
1111111111111Profilin
11211121111114Ribosomal protein L22p/L17e
22222212222223Ribosomal protein L14p/L23e
111311132122121723122110186Ubiquitin family
55445555545557Cofilin/tropomyosin-type actin-binding protein
2222222223212414-3-3 protein
22226463322236Alkaline phosphatase
1134141111321Zinc carboxypeptidase
22325358155334965684025510Aldo/keto reductase family
161613151617171718171914195Myb-like DNA-binding domain
44444445434448Forkhead domain
126233444130Glycosyl hydrolases family 32 N-terminal domain
11111111111112Ribosomal protein L16p/L10e
22222122122222Ribosomal protein S14p/S29e
33335534533343FKBP-type peptidyl-prolyl cis-trans isomerase
11111111111112Glutathione peroxidase
22222222212223
11Dehydrin
9648121288111396106Flavodoxin
11111111111112Calreticulin family
45391820171117774122Common central domain of tyrosinase
71046111210111313109116Aminotransferase class-V
11111111111112Ribonucleotide reductase, small chain
424337394742404244374340496DEAD/DEAH box helicase
768368688886859192819177986Helicase conserved C-terminal domain
1211112121114EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
21222222222223Ribosomal protein L23
11131111111114Pyridoxal-dependent decarboxylase, C-terminal sheet domain
22222222222224Ribosomal protein L5
663586688136681Pyridoxal-dependent decarboxylase conserved domain
33225223232332Citrate synthase, C-terminal domain
55555755555562GHMP kinases N terminal domain
85578877977684Biotin carboxylase, N-terminal domain
11111111111112Tryptophan synthase alpha chain
9107815119111013108121Pyridoxal-phosphate dependent enzyme
12159112619182123171911201NUDIX domain
55445547555458pfkB family carbohydrate kinase
3818202261622211317166Glycosyl hydrolases family 28
1243131116Luciferase-like monooxygenase
22222222222224Ribosomal protein L3
22222222222224Ribosomal protein L11, RNA binding domain
15189142219171722161416199Histidine phosphatase superfamily (branch 1)
11111111121113Thymidylate synthase
332111213Lipoxygenase
44444444444448ATP synthase alpha/beta chain, C terminal domain
55345555545556Calponin homology (CH) domain
45446644464455Glutamine amidotransferases class-II
22212222222223Ribosomal protein S15
12121322311221Thaumatin family
11111111211113Fructose-1-6-bisphosphatase, N-terminal domain
11111211211114Ribonucleotide reductase, all-alpha domain
22222222222224Ribosomal protein S2
322111226453344SRF-type transcription factor (DNA-binding and dimerisation domain)
8968898118899101GATA zinc finger
313914387064476157544536556Amino acid permease
342358535104355Prolyl oligopeptidase family
22112211222220Ribosomal protein L30p/L7e
99710121311121391010125Histidine phosphatase superfamily (branch 2)
11111111111112Respiratory-chain NADH dehydrogenase, 30 Kd subunit
55447554965463Aconitase family (aconitate hydratase)
1428774522244Glycosyl hydrolase family 10
44644564334552Glycosyl hydrolases family 17
22222222222224Ribosomal protein S5, N-terminal domain
1112111111112Nucleoside diphosphate kinase
11114Tetraspanin family
22112222222121Ribosomal protein S10p/S20e
544357359105464Arrestin (or S-antigen), N-terminal domain
11111111111112Phosphoglucose isomerase
11111111111112Carbohydrate phosphorylase
1111111111111SecY translocase
11112111111113Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222222224Ribosomal protein L6
343333433104447Polyprenyl synthetase
45354455454452Hexokinase
311341391011976490Dynamin family
11111111111112Transcription factor TFIID (or TATA-binding protein, TBP)
44246545556454Rieske [2Fe-2S] domain
11341313Phytochrome region
112Proton-conducting membrane transporter
107781110710111098108Biotin-requiring enzyme
11121111111113Phosphofructokinase
22222222222224Ribosomal protein S17
12112112121116Hydroxymethylglutaryl-coenzyme A reductase
34334444534445FGGY family of carbohydrate kinases, N-terminal domain
11Sodium:dicarboxylate symporter family
1195112418111620191212168Enoyl-CoA hydratase/isomerase
22222222222224Ribosomal protein S9/S16
22222222222224Transcription factor TFIIB repeat
8855121081011996101Cytidine and deoxycytidylate deaminase zinc-binding region
1111111111111Molybdopterin oxidoreductase
77515128611871419119Chromo (CHRromatin Organisation MOdifier) domain
23213333222228Phosphatidylinositol-specific phospholipase C, Y domain
34233333222232Phosphatidylinositol-specific phospholipase C, X domain
892416961111711498D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
33133333333233Malic enzyme, N-terminal domain
221132222122226-phosphogluconate dehydrogenase, C-terminal domain
118212272911322626168208Multicopper oxidase
11Granulin
118710121510101414109130WW domain
11111111111112Ribosomal RNA adenine dimethylase
11121121111114Yeast PIR protein repeat
10611093981631131091351221461321161,443WD domain, G-beta repeat
75248749666569Heavy-metal-associated domain
11Transferrin
34345334434343Adenylate kinase
22212222232224Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222121121220Ribosomal protein S8
11111121111113Ribosomal protein S11
44444444444347LIM domain
314Matrixin
23233413323332Regulator of chromosome condensation (RCC1) repeat
22122212222222Ribosomal protein S13/S18
11REV protein (anti-repression trans-activator protein)
22222223333228chorismate binding enzyme
3332433333333660s Acidic ribosomal protein
44444445455451Prenyltransferase and squalene oxidase repeat
66658575556367Protein kinase C terminal domain
11111111111112Single-strand binding protein family
1111111111111S-adenosylmethionine synthetase, N-terminal domain
776710989868792Bromodomain
1311611211512131619149160Acyl-CoA dehydrogenase, C-terminal domain
151514151515151516151515180Ubiquitin carboxyl-terminal hydrolase
1111111111111Ribosomal protein L36
23144344453340Ribonuclease T2 family
33333433333337HSF-type DNA-binding
22232222222225SRP54-type protein, GTPase domain
1111111111111Urease alpha-subunit, N-terminal domain
997111922816201289150Serine carboxypeptidase
112Apoptosis regulator proteins, Bcl-2 family
88888888888795Phosphatidylinositol 3- and 4-kinase
13126334343134Transketolase, thiamine diphosphate binding domain
224835884347Glycosyl hydrolases family 11
23233433343336Inositol monophosphatase family
44334444434445Glutaredoxin
43249545743353Isocitrate lyase family
22224222222226Serine hydroxymethyltransferase
35123524566244Iron-containing alcohol dehydrogenase
22122222222223Ribosomal protein L10
24442332222434KOW motif
1111111119Ribosomal protein L34
22212222222223RF-1 domain
63126424434140Sodium:solute symporter family
11111112111113Imidazoleglycerol-phosphate dehydratase
111111111110DNA polymerase family A
11111111111112IMP dehydrogenase / GMP reductase domain
11111111111112Glucose-6-phosphate dehydrogenase, NAD binding domain
57457766657570Protein phosphatase 2C
22222333223228Nucleotidyl transferase
4514713689118278Carbonic anhydrase
1121111111112Phosphoribulokinase / Uridine kinase family
575712951010118695Fatty acid desaturase
66666666666672MutS domain V
11111111121113Delta-aminolevulinic acid dehydratase
65146855656461Arginase family
66666666666672MCM P-loop domain
13122223212223Squalene/phytoene synthase
9117881091010795103FHA domain
323015587365516365754741615AMP-binding enzyme
33333644536346G-protein alpha subunit
786811898878795HMG (high mobility group) box
11158172627172225132315219His Kinase A (phospho-acceptor) domain
33333333333336Armadillo/beta-catenin-like repeat
243423264433294633724226432Tetratricopeptide repeat
32143534534138Ion transport protein
11111111111112DNA gyrase/topoisomerase IV, subunit A
911991211111111111111127BRCA1 C Terminus (BRCT) domain
565510989976786Glycosyl transferases group 1
53359727874565Glycosyl transferase family 2
22219314424236SAM domain (Sterile alpha motif)
11111111111112linker histone H1 and H5 family
11111111111112Ribosomal protein L7/L12 C-terminal domain
17161612438Pectate lyase
1111411232118ribonuclease
1111111111111Urease, gamma subunit
64344544644452CoA-ligase
8115262226292919461619256Phosphopantetheine attachment site
23323334323334Formyl transferase
11959111091011101110116Metallopeptidase family M24
181214101718141717141716184Leucine Rich Repeat
3347133591108405191864828671alpha/beta hydrolase fold
33333333333336RNA polymerase Rpb2, domain 6
43343444444445PB1 domain
22223232222226Staphylococcal nuclease homologue
11101071110101010101110120Rab-GTPase-TBC domain
11111111111112Tudor domain
11111111111112WH1 domain
35354776444456Zinc finger, ZZ type
212111113114HRDC domain
99771110810101098108CBS domain
222222222