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PFAM Domains • Crustoderma dryinum OMC1663 v1.0
Annotations/GenomesCersu1Crudry1Laesu1Obbri1Spalat1Wolco1TotalAnnotation Description
PFAMs
7,63610,9487,9048,0118,9887,82551,312
454543473747264ATPase family associated with various cellular activities (AAA)
484635494038256ABC transporter
44444424ATP synthase alpha/beta family, nucleotide-binding domain
1113EGF-like domain
14161614141488Elongation factor Tu GTP binding domain
10131211101167Helix-loop-helix DNA-binding domain
598109748Hsp20/alpha crystallin family
811788749Hsp70 protein
87787744KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
11114SH2 domain
251227261421125SH3 domain
11101011101062Actin
3892936730149Ankyrin repeat
67778742ADP-ribosylation factor family
414536465039257Eukaryotic aspartyl protease
33333318Cyclic nucleotide-binding domain
3111118Cytochrome c
101014136659Double-stranded RNA binding motif
171191821673EF hand
111254Fe-4S binding domain
111115Fibronectin type III domain
22Globin
19121324131596Glutathione S-transferase, C-terminal domain
1111138Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1113Hemopexin
71213109657Homeodomain
22232213lactate/malate dehydrogenase, NAD binding domain
11Lipocalin / cytosolic fatty-acid binding protein family
57666434Myosin head (motor domain)
207196154184971921,030Cytochrome P450
1891621621962121521,073Protein kinase domain
13151616111990Pyridine nucleotide-disulphide oxidoreductase
193331242725159Ras family
10981091056Response regulator receiver domain
37414111251RNase H
597082686464407RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
33Reverse transcriptase (RNA-dependent DNA polymerase)
121116Copper/zinc superoxide dismutase (SODC)
43222215Iron/manganese superoxide dismutases, alpha-hairpin domain
9112612242Subtilase family
374435304132219Sugar (and other) transporter
71110811956Thioredoxin
45555529Tubulin/FtsZ family, GTPase domain
432413von Willebrand factor type A domain
533356602554281Zinc finger, C2H2 type
601470661065285Zinc finger, C3HC4 type (RING finger)
32162613942138Zinc knuckle
22222212Protein-tyrosine phosphatase
83135878293111591short chain dehydrogenase
566542544862327Zinc-binding dehydrogenase
54545427Thiolase, N-terminal domain
410949844Beta-ketoacyl synthase, N-terminal domain
213313132Fe-2S iron-sulfur cluster binding domain
22322112Enolase, C-terminal TIM barrel domain
711878950Glutamine amidotransferase class-I
10111412121069TCP-1/cpn60 chaperonin family
23333317Glutamine synthetase, catalytic domain
1111116Triosephosphate isomerase
16211513191195E1-E2 ATPase
14151514151588Core histone H2A/H2B/H3/H4
33Copper binding proteins, plastocyanin/azurin family
68865841Alpha amylase, catalytic domain
65666635Phorbol esters/diacylglycerol binding domain (C1 domain)
36344424Bacterial transferase hexapeptide (six repeats)
34337323tRNA synthetases class I (I, L, M and V)
13131212141074Cyclin, N-terminal domain
33131339820126Carboxylesterase family
44444424DNA polymerase family B
33333318ATP synthase subunit C
1713132238Peroxidase
341113224Beta-lactamase
34744325C-5 cytosine-specific DNA methylase
262928262427160Calcineurin-like phosphoesterase
918910131271Cellulase (glycosyl hydrolase family 5)
67667638tRNA synthetases class II (D, K and N)
363937363839225Mitochondrial carrier protein
11recA bacterial DNA recombination protein
16151818161699Aminotransferase class I and II
63773632Phosphoribosyl transferase domain
15152014131491Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1211117Phosphoglycerate kinase
23222213Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
211116Chaperonin 10 Kd subunit
12151116101377C2 domain
1612172092195PH domain
696610441bZIP transcription factor
241821221416115Aldehyde dehydrogenase family
706472825566409Fungal Zn(2)-Cys(6) binuclear cluster domain
252125282329151Cytochrome b5-like Heme/Steroid binding domain
44151621Oxidoreductase molybdopterin binding domain
121211128964Oxidoreductase NAD-binding domain
263729242426166SNF2 family N-terminal domain
22222212Ribosomal protein S7p/S5e
182923222621139Ubiquitin-conjugating enzyme
55555530Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
32222213Hsp90 protein
22232213Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
22321212Cysteine-rich secretory protein family
111126Ribosomal protein S3, C-terminal domain
93664533Cupin
333333182-oxoacid dehydrogenases acyltransferase (catalytic domain)
33433420Catalase
11114Disintegrin
5371117UDP-glucoronosyl and UDP-glucosyl transferase
56555531Aminotransferase class-III
12222211Ribosomal protein S19
1211117DNA gyrase B
34334320Thiamine pyrophosphate enzyme, central domain
33333318Lyase
1111217Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1211117Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
111115Orotidine 5'-phosphate decarboxylase / HUMPS family
1211117Indole-3-glycerol phosphate synthase
22222111Aromatic amino acid lyase
1111116Pyruvate kinase, barrel domain
9101098854Kinesin motor domain
223835333234194DnaJ domain
12151514131483Proteasome subunit
88353431Major intrinsic protein
1111116ATP synthase
32232113Glycosyl hydrolase family 1
12111173'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
22222111Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
15161519181699Ubiquitin family
55555530Cofilin/tropomyosin-type actin-binding protein
2222221214-3-3 protein
31217Alkaline phosphatase
2111117Zinc carboxypeptidase
587248685354353Aldo/keto reductase family
107131291263Myb-like DNA-binding domain
55557532Forkhead domain
11Glycosyl hydrolases family 32 N-terminal domain
1311219Ribosomal protein L16p/L10e
12222211Ribosomal protein S14p/S29e
3171034340FKBP-type peptidyl-prolyl cis-trans isomerase
1111116Glutathione peroxidase
22228
96574435Flavodoxin
11Protamine P1
11Tropomyosin
1111116Calreticulin family
413210Common central domain of tyrosinase
581788854Aminotransferase class-V
22223213Ribonucleotide reductase, small chain
538152476551349DEAD/DEAH box helicase
8811183788688534Helicase conserved C-terminal domain
1211128EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22122211Ribosomal protein L23
1211117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111116Ribosomal protein L5
49543429Pyridoxal-dependent decarboxylase conserved domain
45446427Citrate synthase, C-terminal domain
55555530GHMP kinases N terminal domain
76866942Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
81211891058Pyridoxal-phosphate dependent enzyme
9161612161584NUDIX domain
44344322pfkB family carbohydrate kinase
64753934Glycosyl hydrolases family 28
22222212Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
89888950Histidine phosphatase superfamily (branch 1)
1211117Thymidylate synthase
11Lipoxygenase
44444424ATP synthase alpha/beta chain, C terminal domain
45553426Calponin homology (CH) domain
52552423Glutamine amidotransferases class-II
23222213Ribosomal protein S15
33222416Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
16112112Ribonucleotide reductase, all-alpha domain
32352217Ribosomal protein S2
22222212SRF-type transcription factor (DNA-binding and dimerisation domain)
1011101091060GATA zinc finger
254162472399Amino acid permease
410645635Prolyl oligopeptidase family
12312110Ribosomal protein L30p/L7e
98119101259Histidine phosphatase superfamily (branch 2)
111115Respiratory-chain NADH dehydrogenase, 30 Kd subunit
445441031Aconitase family (aconitate hydratase)
63361423Glycosyl hydrolase family 10
1111116Glycosyl hydrolases family 17
22322213Ribosomal protein S5, N-terminal domain
22222212Nucleoside diphosphate kinase
1416113Tetraspanin family
22323214Ribosomal protein S10p/S20e
14543421Arrestin (or S-antigen), N-terminal domain
1112117Phosphoglucose isomerase
1111116Carbohydrate phosphorylase
1311118SecY translocase
1121117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
12222211Ribosomal protein L6
53544425Polyprenyl synthetase
23322214Hexokinase
715879753Dynamin family
2111117Transcription factor TFIID (or TATA-binding protein, TBP)
43343320Rieske [2Fe-2S] domain
112Phytochrome region
88888848Biotin-requiring enzyme
1111116Phosphofructokinase
22222212Ribosomal protein S17
16111111Hydroxymethylglutaryl-coenzyme A reductase
33333318FGGY family of carbohydrate kinases, N-terminal domain
677761245Enoyl-CoA hydratase/isomerase
21222211Ribosomal protein S9/S16
23222213Transcription factor TFIIB repeat
591087847Cytidine and deoxycytidylate deaminase zinc-binding region
111115Molybdopterin oxidoreductase
76911111155Chromo (CHRromatin Organisation MOdifier) domain
1111116Phosphatidylinositol-specific phospholipase C, Y domain
11214110Phosphatidylinositol-specific phospholipase C, X domain
69765841D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
33333419Malic enzyme, N-terminal domain
241122126-phosphogluconate dehydrogenase, C-terminal domain
9107105546Multicopper oxidase
81210139860WW domain
12222211Ribosomal RNA adenine dimethylase
178168135164130139914WD domain, G-beta repeat
55654429Heavy-metal-associated domain
25333319Adenylate kinase
12222110Phosphoglucomutase/phosphomannomutase, C-terminal domain
22112210Ribosomal protein S8
23222112Ribosomal protein S11
67666536LIM domain
44434322Regulator of chromosome condensation (RCC1) repeat
12222211Ribosomal protein S13/S18
22222212chorismate binding enzyme
3533332060s Acidic ribosomal protein
44544526Prenyltransferase and squalene oxidase repeat
55765634Protein kinase C terminal domain
1111116Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
8111411101064Bromodomain
898109953Acyl-CoA dehydrogenase, C-terminal domain
13241414151595Ubiquitin carboxyl-terminal hydrolase
111115Ribosomal protein L36
22232213Ribonuclease T2 family
24645425HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111116Urease alpha-subunit, N-terminal domain
1415101591174Serine carboxypeptidase
22Apoptosis regulator proteins, Bcl-2 family
88888848Phosphatidylinositol 3- and 4-kinase
22222212Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
22322213Inositol monophosphatase family
35444424Glutaredoxin
43542321Isocitrate lyase family
1111116Serine hydroxymethyltransferase
35435424Iron-containing alcohol dehydrogenase
22222212Ribosomal protein L10
36655530KOW motif
121116Ribosomal protein L34
112Ribosomal protein L33
44233319RF-1 domain
25427626Sodium:solute symporter family
1121117Imidazoleglycerol-phosphate dehydratase
1121139DNA polymerase family A
111115IMP dehydrogenase / GMP reductase domain
1111116Glucose-6-phosphate dehydrogenase, NAD binding domain
4767111045Protein phosphatase 2C
25234319Nucleotidyl transferase
43244219Carbonic anhydrase
1111116Phosphoribulokinase / Uridine kinase family
10101210111063Fatty acid desaturase
676851042MutS domain V
1111116Delta-aminolevulinic acid dehydratase
44554527Arginase family
86666638MCM P-loop domain
1211218Squalene/phytoene synthase
111191413866FHA domain
353232302734190AMP-binding enzyme
134214141316112G-protein alpha subunit
14131315151484HMG (high mobility group) box
11Cytochrome c oxidase subunit III
56565633His Kinase A (phospho-acceptor) domain
34444423Armadillo/beta-catenin-like repeat
311628291633153Tetratricopeptide repeat
34243420Ion transport protein
1211117DNA gyrase/topoisomerase IV, subunit A
1269104950BRCA1 C Terminus (BRCT) domain
64763632Glycosyl transferases group 1
33443421Glycosyl transferase family 2
1122118SAM domain (Sterile alpha motif)
13322314linker histone H1 and H5 family
111115Ribosomal protein L7/L12 C-terminal domain
51118ribonuclease
1111116Urease, gamma subunit
33343319CoA-ligase
814899755Phosphopantetheine attachment site
22222212Formyl transferase
10121211121067Metallopeptidase family M24
153151541769Leucine Rich Repeat
35124433736167alpha/beta hydrolase fold
35333320RNA polymerase Rpb2, domain 6
36755733PB1 domain
24222214Staphylococcal nuclease homologue
91210912860Rab-GTPase-TBC domain
1111116Tudor domain
22123212WH1 domain
43343320Zinc finger, ZZ type
1311118HRDC domain
1079951050CBS domain
23222213Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
45445426S1 RNA binding domain
1111116HIUase/Transthyretin family
64444426AhpC/TSA family
34544424tRNA synthetases class I (W and Y)
21332314UvrD/REP helicase N-terminal domain
48349432Rhodanese-like domain
22222212Universal stress protein family
282726321934166Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
111115C-terminal regulatory domain of Threonine dehydratase
23322214AIR synthase related protein, N-terminal domain
66665635tRNA synthetase class II core domain (G, H, P, S and T)
22222212Tetrapyrrole (Corrin/Porphyrin) Methylases
1211117Glycosyl transferase family, a/b domain
21216Class II Aldolase and Adducin N-terminal domain
33334319Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
56554530Fes/CIP4, and EFC/F-BAR homology domain
32342317IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
62542423Phospholipase D Active site motif
24124215Regulator of G protein signaling domain
37545529GTPase-activator protein for Ras-like GTPase
75687639RasGEF domain
73786738RasGEF N-terminal motif
12171413151283RhoGAP domain
12151514151485RhoGEF domain
34444423SPRY domain
34333319RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
36332320Gelsolin repeat
78686843UBA/TS-N domain
191520181516103PHD-finger
12222211GGL domain
45444425HECT-domain (ubiquitin-transferase)
13321212Helix-hairpin-helix motif
2212119MSP (Major sperm protein) domain
949104844Ribonuclease III domain
242211223Region in Clathrin and VPS
14334318RanBP1 domain
23223315PPIC-type PPIASE domain
213321425Zn-finger in Ran binding protein and others
211227231322118Zinc finger C-x8-C-x5-C-x3-H type (and similar)
111115B-box zinc finger
311735635Poly(ADP-ribose) polymerase catalytic domain
32423216Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
95341141082085456F-box domain
1111116Elongation factor 1 gamma, conserved domain
111115Calpain family cysteine protease
32232214Copper fist DNA binding domain
698781048CRAL/TRIO domain
247132365320236BTB/POZ domain
10313Ricin-type beta-trefoil lectin domain
1211117Inhibitor of Apoptosis domain
33333419Voltage gated chloride channel
1310291081888Caspase domain
55475329GDSL-like Lipase/Acylhydrolase
1211117Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
292513281520130ABC transporter transmembrane region
156Integrase core domain
76463329FAD binding domain
4141111Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1112117HAMP domain
22222212ribosomal L5P family C-terminus
67666738Insulinase (Peptidase family M16)
45645327Dehydrogenase E1 component
1211218Lumazine binding domain
66865637Elongation factor G C-terminus
34445424HMGL-like
35444424DnaJ central domain
42131112Starch binding domain
13223314Ribosomal protein L1p/L10e family
98668441Cation transporting ATPase, C-terminus
910869648Cation transporter/ATPase, N-terminus
1019212144dUTPase
44744629Aconitase C-terminal domain
35333320Amino acid kinase family
1211117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
491147843Acyl transferase domain
1111116Urease beta subunit
34432420Dihydrodipicolinate synthetase family
301832291531155haloacid dehalogenase-like hydrolase
23122212Glycosyl hydrolases family 2
11107118956Glycosyl hydrolases family 18
1111217Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
111126Acylphosphatase
1131118Adenylosuccinate synthetase
1111116Asparaginase, N-terminal
13333215Peptidase S24-like
1111116Inorganic pyrophosphatase
6126410543Glycosyl hydrolases family 16
33232215Glycosyl hydrolases family 15
131591210766NADH:flavin oxidoreductase / NADH oxidase family
11111163-hydroxyacyl-CoA dehydrogenase, C-terminal domain
34343219Glycosyl hydrolase family 20, catalytic domain
69775640HhH-GPD superfamily base excision DNA repair protein
1121117AIR carboxylase
221729231215118GMC oxidoreductase
22222212Asparagine synthase
161935Fungal cellulose binding domain
67666637Septin
1111116EF-1 guanine nucleotide exchange domain
1111116Homoserine dehydrogenase
34525625Flavin-binding monooxygenase-like
34334320tRNA synthetases class I (E and Q), catalytic domain
1131219tRNA synthetases class I (R)
59367434XPG N-terminal domain
12991271362Metallo-beta-lactamase superfamily
1111116F5/8 type C domain
49644431Choline/Carnitine o-acyltransferase
1111116Putative esterase
112Glycosyl hydrolase family 9
1111116Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1121117Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
32343318RNB domain
42242216Dioxygenase
46348328CNH domain
14223214Diacylglycerol kinase catalytic domain
14191613121387Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
53673428P21-Rho-binding domain
15161215141486PX domain
32333418Ras association (RalGDS/AF-6) domain
46343424UBX domain
56555531VHS domain
1111116Phosphoinositide 3-kinase C2
27222217DAHP synthetase I family
35343321Carbon-nitrogen hydrolase
22Geminivirus Rep catalytic domain
1111116Prephenate dehydratase
54554528Syntaxin
55555530Pumilio-family RNA binding repeat
78777743Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
1111116ER lumen protein retaining receptor
22222212tRNA N6-adenosine threonylcarbamoyltransferase
1111116Histidinol dehydrogenase
34333319impB/mucB/samB family
31116
1111116Ribosomal L15
13113110Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
111115Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
111115Ribosomal L39 protein
1111116Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
3227Glycosyl hydrolase family 7
22222212RNA pseudouridylate synthase
78676640Histone deacetylase domain
21115POT family
22212211PWWP domain
181919181616106SET domain
56264427Isochorismatase family
2112129Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
7157610651XPG I-region
1121117Acetokinase family
1111116DNA photolyase
111115Cation-independent mannose-6-phosphate receptor repeat
11114Cytosol aminopeptidase family, catalytic domain
112Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
23342317Acyl CoA binding protein
55563529Cullin family
1111116Elongation factor TS
43434422FAD binding domain
1316711151072O-methyltransferase domain
44454425EamA-like transporter family
22228
7101277750ThiF family
1111116Ribosomal family S4e
21321211Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
22222212Ammonium Transporter Family
53343321Sulfate permease family
1211117MATH domain
22222212Dehydratase family
23443218Transaldolase/Fructose-6-phosphate aldolase
31131110Mechanosensitive ion channel
1211218GTP cyclohydrolase II
12111173,4-dihydroxy-2-butanone 4-phosphate synthase
44444424Adaptor complexes medium subunit family
109101081057Exonuclease
1111116Dipeptidyl peptidase IV (DPP IV) N-terminal region
11NB-ARC domain
79579845Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
213Sodium:sulfate symporter transmembrane region
1111116DNA-dependent RNA polymerase
2211118Glycosyl transferase family 4
1111116HCO3- transporter family
34322216Nucleosome assembly protein (NAP)
48444529Synaptobrevin
1111116GMP synthase C terminal domain
11LAGLIDADG endonuclease
34333420Adenosine/AMP deaminase
46554529Oxidoreductase FAD-binding domain
11522415Thioesterase domain
22222212Histidine biosynthesis protein
34333319Glycosyltransferase family 20
1111116UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
1214PAS fold
11Diguanylate cyclase, GGDEF domain
22222212Probable molybdopterin binding domain
44445425Sec1 family
12222211GDP dissociation inhibitor
47686637Sodium/hydrogen exchanger family
22222212RNA polymerase Rpb3/RpoA insert domain
44444424Initiation factor 2 subunit family
11PQQ enzyme repeat
12222211Electron transfer flavoprotein domain
1211117Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
1111116GTP1/OBG
22222212Gamma-glutamyltranspeptidase
112Ribosomal L40e family
111115GrpE
33333318TatD related DNase
12122210Inhibitor of apoptosis-promoting Bax1
1111116Eukaryotic DNA topoisomerase I, catalytic core
48656736Dynamin central region
11111166-O-methylguanine DNA methyltransferase, DNA binding domain
34532421Bacteriorhodopsin-like protein
22222212Carboxyl transferase domain
877941247UbiA prenyltransferase family
24234318Endoribonuclease L-PSP
14117115Phosphorylase superfamily
11114Mannose-6-phosphate isomerase
65655835Cys/Met metabolism PLP-dependent enzyme