PFAM Domains • Pyrenochaeta sp. DS3sAY3a v1.0
Annotations/GenomesAltbr1Cocca1CocheC5_3Coclu2Cocmi1Cocsa1Cocvi1Pyrsp1Pyrtr1Pyrtt1Settu1Stasp1TotalAnnotation Description
PFAMs
5,9038,9079,2958,8208,7108,8298,99810,5616,7138,5168,66110,394104,307
111111177 transmembrane receptor (rhodopsin family)
324041403940425239463955505ATPase family associated with various cellular activities (AAA)
374342423841395240403943496ABC transporter
44444444444448ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
131414141414141412131414164Elongation factor Tu GTP binding domain
111313141516151311121416163Helix-loop-helix DNA-binding domain
13333333123331Hsp20/alpha crystallin family
67877778777987Hsp70 protein
88888888988897KH domain
112Ribulose bisphosphate carboxylase large chain, catalytic domain
11111111111112SH2 domain
212322232323232324232325276SH3 domain
9101010101010107101011117Actin
357288867075799558525387850Ankyrin repeat
47878585223867PAN domain
77777778777785ADP-ribosylation factor family
81722131415161212131211165Eukaryotic aspartyl protease
24444445444548Cyclic nucleotide-binding domain
121116Cytochrome b(C-terminal)/b6/petD
12115Cytochrome b/b6/petB
11111111111112Cytochrome c
21111112212318Double-stranded RNA binding motif
181818172018181719171718215EF hand
211211111211154Fe-4S binding domain
23423333322535Fibronectin type III domain
11111111111112Globin
10898810101664818115Glutathione S-transferase, C-terminal domain
11111111111112Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
598988811910811104Homeodomain
44444445334548lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
65544444554454Myosin head (motor domain)
6314315610612412713814187981331631,479Cytochrome P450
841081151031041101081661041121061401,360Protein kinase domain
91617161413162212141518182Pyridine nucleotide-disulphide oxidoreductase
222526252324252422232526290Ras family
212527242525252824262532307Response regulator receiver domain
2109255134RNase H
495858605857595658565859686RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
3126434Reverse transcriptase (RNA-dependent DNA polymerase)
12222222222324Copper/zinc superoxide dismutase (SODC)
22222222222224Iron/manganese superoxide dismutases, alpha-hairpin domain
713121112121412991212135Subtilase family
74697071666869122886264113936Sugar (and other) transporter
1011131111111111991213132Thioredoxin
53243332223436Trypsin
44444546444451Tubulin/FtsZ family, GTPase domain
13544444344343von Willebrand factor type A domain
566168586059659070556197800Zinc finger, C2H2 type
355454515651545743605161627Zinc finger, C3HC4 type (RING finger)
164122116342320126119Zinc knuckle
22222222222325Protein-tyrosine phosphatase
981321321401251271272121131131311801,630short chain dehydrogenase
527169596662659060636895820Zinc-binding dehydrogenase
96766666766778Thiolase, N-terminal domain
102928182221251323263124270Beta-ketoacyl synthase, N-terminal domain
466676676666722Fe-2S iron-sulfur cluster binding domain
112Papain family cysteine protease
11111111111112Enolase, C-terminal TIM barrel domain
11226Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
78888887699894Glutamine amidotransferase class-I
101010101010101010111010121TCP-1/cpn60 chaperonin family
11114ATP synthase A chain
33333334333337Glutamine synthetase, catalytic domain
22222222222224Triosephosphate isomerase
131619171718191816151717202E1-E2 ATPase
58118868931799119Core histone H2A/H2B/H3/H4
11111117Copper binding proteins, plastocyanin/azurin family
66677668676980Alpha amylase, catalytic domain
21121212221219Phorbol esters/diacylglycerol binding domain (C1 domain)
69877896889792Bacterial transferase hexapeptide (six repeats)
73343333854349tRNA synthetases class I (I, L, M and V)
57977879879891Cyclin, N-terminal domain
242529252528253522222337320Carboxylesterase family
4444444432DNA polymerase family B
34444444444548ATP synthase subunit C
11Legume lectin domain
77887775777784Peroxidase
88767882078521113Beta-lactamase
22232223333330C-5 cytosine-specific DNA methylase
2114NADH dehydrogenase
232528252626262926292727317Calcineurin-like phosphoesterase
10998810101469712112Cellulase (glycosyl hydrolase family 5)
77787777777785tRNA synthetases class II (D, K and N)
364541404241444240414042494Mitochondrial carrier protein
112recA bacterial DNA recombination protein
7161721151716209151617186Aminotransferase class I and II
69888991099108103Phosphoribosyl transferase domain
111213121211121112121211141Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111111112Phosphoglycerate kinase
22222222222224Ribosomal protein S4/S9 N-terminal domain
22222222221223Ribosomal protein S12/S23
2111117Bacterial regulatory helix-turn-helix proteins, AraC family
11111111111112Chaperonin 10 Kd subunit
111212131212121311121111142C2 domain
161922211919181918201917227PH domain
699999111089810107bZIP transcription factor
202527252624273121221925292Aldehyde dehydrogenase family
79172192179179182183326921071602752,126Fungal Zn(2)-Cys(6) binuclear cluster domain
182424242624242722242628291Cytochrome b5-like Heme/Steroid binding domain
34434445333646Oxidoreductase molybdopterin binding domain
91718151818161810161618189Oxidoreductase NAD-binding domain
212525252724262926262427305SNF2 family N-terminal domain
22222222222224Ribosomal protein S7p/S5e
212122252222222521252527278Ubiquitin-conjugating enzyme
77767788776784Isocitrate/isopropylmalate dehydrogenase
22222222222224Ribosomal Proteins L2, RNA binding domain
11111111111112Hsp90 protein
12222222222223Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111112Dihydrofolate reductase
9121012111112276559129Chitin recognition protein
31123114222426Cysteine-rich secretory protein family
21111111111113Ribosomal protein S3, C-terminal domain
34446455666962Cupin
12222222222223Annexin
11111112111113Eukaryotic-type carbonic anhydrase
1111111111212Chalcone and stilbene synthases, N-terminal domain
244333373333412-oxoacid dehydrogenases acyltransferase (catalytic domain)
44444446554654Catalase
11111111111112Disintegrin
11UDP-glucoronosyl and UDP-glucosyl transferase
612109111212138988118Aminotransferase class-III
12222222222223Ribosomal protein S19
11111111111112DNA gyrase B
47665669344767Thiamine pyrophosphate enzyme, central domain
44444444444448Lyase
12222222222223Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111111323319Sodium:neurotransmitter symporter family
1111111111111Adenylate and Guanylate cyclase catalytic domain
1111111111111ATP synthase delta (OSCP) subunit
11111112111113Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111111112Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
1111116Aromatic amino acid lyase
11111111111112Pyruvate kinase, barrel domain
1010111010912101010911122Kinesin motor domain
302929302930293132303133363DnaJ domain
121414141414141414141414166Proteasome subunit
767865687781085Major intrinsic protein
11111111111112ATP synthase
23333336333540Glycosyl hydrolase family 1
11111111111113'5'-cyclic nucleotide phosphodiesterase
11211111111113Profilin
21111111111113Ribosomal protein L22p/L17e
22222222222224Ribosomal protein L14p/L23e
10911121111101211121111131Ubiquitin family
25555556255555Cofilin/tropomyosin-type actin-binding protein
3222222222222514-3-3 protein
56666665456667Alkaline phosphatase
1088888810778999Zinc carboxypeptidase
222625272529273721322734332Aldo/keto reductase family
111515131413151314131612164Myb-like DNA-binding domain
24444445444447Forkhead domain
23343535333340Glycosyl hydrolases family 32 N-terminal domain
11111111111112Ribosomal protein L16p/L10e
13333333133332Ribosomal protein S14p/S29e
55555555555560FKBP-type peptidyl-prolyl cis-trans isomerase
11111111111112Glutathione peroxidase
11111111111112
68988977778892Flavodoxin
123Protamine P1
1111111111111Calreticulin family
812121211914146101024142Common central domain of tyrosinase
388118887389889Aminotransferase class-V
11111111111112Ribonucleotide reductase, small chain
444139393940403852474241502DEAD/DEAH box helicase
657577757476737477807376895Helicase conserved C-terminal domain
11111111111112EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222222224Ribosomal protein L23
1111111111111Pyridoxal-dependent decarboxylase, C-terminal sheet domain
22222222222224Ribosomal protein L5
66676766666674Pyridoxal-dependent decarboxylase conserved domain
23333232222330Citrate synthase, C-terminal domain
55555555555560GHMP kinases N terminal domain
77777778677784Biotin carboxylase, N-terminal domain
11111111111112Tryptophan synthase alpha chain
81014101010101110141111129Pyridoxal-phosphate dependent enzyme
111616161515151414131519179NUDIX domain
56556567555565pfkB family carbohydrate kinase
64534448656560Glycosyl hydrolases family 28
1111111119Luciferase-like monooxygenase
32222222222225Ribosomal protein L3
12222221122221Ribosomal protein L11, RNA binding domain
101315131314131410131214154Histidine phosphatase superfamily (branch 1)
11111111111112Thymidylate synthase
1315Lipoxygenase
44444444444448ATP synthase alpha/beta chain, C terminal domain
55555555455559Calponin homology (CH) domain
66756555555666Glutamine amidotransferases class-II
12322222222224Ribosomal protein S15
11111111111112Thaumatin family
22212222222122Fructose-1-6-bisphosphatase, N-terminal domain
11111111111112Ribonucleotide reductase, all-alpha domain
22322222222225Ribosomal protein S2
22222222232225SRF-type transcription factor (DNA-binding and dimerisation domain)
56766768565673GATA zinc finger
224039454137406132333244466Amino acid permease
25866555266561Prolyl oligopeptidase family
23333333223232Ribosomal protein L30p/L7e
61212121212121310121212137Histidine phosphatase superfamily (branch 2)
11111111111112Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44444446454653Aconitase family (aconitate hydratase)
56565566445966Glycosyl hydrolase family 10
12223224233228Glycosyl hydrolases family 17
22222222122223Ribosomal protein S5, N-terminal domain
11111111111112Nucleoside diphosphate kinase
1111111112112Tetraspanin family
21121111211115Ribosomal protein S10p/S20e
35444456446453Arrestin (or S-antigen), N-terminal domain
11111111111112Phosphoglucose isomerase
11111111111112Carbohydrate phosphorylase
11111111111112SecY translocase
11111111111112Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222222224Ribosomal protein L6
58848783553367Polyprenyl synthetase
54444445554654Hexokinase
4775444109511878Dynamin family
11111111111112Transcription factor TFIID (or TATA-binding protein, TBP)
45556568555766Rieske [2Fe-2S] domain
11Phytochrome region
4734321Proton-conducting membrane transporter
610118101010149999115Biotin-requiring enzyme
11111111111112Phosphofructokinase
22222222222224Ribosomal protein S17
11111112112114Hydroxymethylglutaryl-coenzyme A reductase
33333333333336FGGY family of carbohydrate kinases, N-terminal domain
11111111111112Sodium:dicarboxylate symporter family
8111212111112239101015144Enoyl-CoA hydratase/isomerase
22222222222224Ribosomal protein S9/S16
22222222222224Transcription factor TFIIB repeat
56676667656975Cytidine and deoxycytidylate deaminase zinc-binding region
21111111111113Molybdopterin oxidoreductase
4557576521210472Chromo (CHRromatin Organisation MOdifier) domain
23333343333336Phosphatidylinositol-specific phospholipase C, Y domain
33343343433339Phosphatidylinositol-specific phospholipase C, X domain
999877913781013109D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
12222222222223Malic enzyme, N-terminal domain
122222211223226-phosphogluconate dehydrogenase, C-terminal domain
5101211111010898814116Multicopper oxidase
91111111110111210111115133WW domain
11111111111112Ribosomal RNA adenine dimethylase
1222222222322Yeast PIR protein repeat
971161271171141321221131031011171091,368WD domain, G-beta repeat
65465666444561Heavy-metal-associated domain
44433333443442Adenylate kinase
32222322322227Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222222111221Ribosomal protein S8
11111111111112Ribosomal protein S11
34444445444549LIM domain
2131112314Matrixin
12122122222120Regulator of chromosome condensation (RCC1) repeat
32222222222225Ribosomal protein S13/S18
2114NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
22222222232225chorismate binding enzyme
4444444433454760s Acidic ribosomal protein
45445554444452Prenyltransferase and squalene oxidase repeat
55665556565665Protein kinase C terminal domain
11111111111112Single-strand binding protein family
11111111111112S-adenosylmethionine synthetase, N-terminal domain
67777778798888Bromodomain
141615141515172312121418185Acyl-CoA dehydrogenase, C-terminal domain
151514141515151517141416179Ubiquitin carboxyl-terminal hydrolase
1111111119Ribosomal protein L36
22322222222225Ribonuclease T2 family
23433333333336HSF-type DNA-binding
22222222222224SRP54-type protein, GTPase domain
11111111111213Urease alpha-subunit, N-terminal domain
9111311111111910101113130Serine carboxypeptidase
78888888788894Phosphatidylinositol 3- and 4-kinase
22222223222528Transketolase, thiamine diphosphate binding domain
45555556345961Glycosyl hydrolases family 11
55555555455559Inositol monophosphatase family
14444444244443Glutaredoxin
23333335233538Isocitrate lyase family
22222222222224Serine hydroxymethyltransferase
35644455444553Iron-containing alcohol dehydrogenase
12222222222223Ribosomal protein L10
54333344633344KOW motif
1111111119Ribosomal protein L34
1111116Negative factor, (F-Protein) or Nef
12222222222223RF-1 domain
12343235343336Sodium:solute symporter family
11111111111112Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
11111111111112IMP dehydrogenase / GMP reductase domain
11111111111112Glucose-6-phosphate dehydrogenase, NAD binding domain
67877777777784Protein phosphatase 2C
23333333333335Nucleotidyl transferase
12232224322631Carbonic anhydrase
21111111111113Phosphoribulokinase / Uridine kinase family
67787778667783Fatty acid desaturase
66666666666672MutS domain V
11111111111112Delta-aminolevulinic acid dehydratase
45545654554658Arginase family
66766666666673MCM P-loop domain
22222222222224Squalene/phytoene synthase
7889777891081098FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
3457575041605666501095452686AMP-binding enzyme
34444445444448G-protein alpha subunit
77788997987894HMG (high mobility group) box
11114NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1113Cytochrome c oxidase subunit III
162022202022212523232129262His Kinase A (phospho-acceptor) domain
13333333333334Armadillo/beta-catenin-like repeat
232831372731304028272731360Tetratricopeptide repeat
22232222332227Ion transport protein
11111111111112DNA gyrase/topoisomerase IV, subunit A
10101111911101211111111128BRCA1 C Terminus (BRCT) domain
366776667761077Glycosyl transferases group 1
46546763853562Glycosyl transferase family 2
63323352522339SAM domain (Sterile alpha motif)
11111111111112linker histone H1 and H5 family
11211111111113Ribosomal protein L7/L12 C-terminal domain
75565557224356Pectate lyase
11212121121116ribonuclease
1111111111212Urease, gamma subunit
34544444444448CoA-ligase
82729262131281525603120321Phosphopantetheine attachment site
33333333333336Formyl transferase
59999998789899Metallopeptidase family M24
131618151617171315161515186Leucine Rich Repeat
223942534241426221393870511alpha/beta hydrolase fold
3333