PFAM Domains • Flagelloscypha sp. PMI_526 v1.0
Annotations/GenomesAuramp1Denbi1Fishe1FlaPMI526_1Niavib1Schco3TotalAnnotation Description
PFAMs
10,40013,2147,10513,6198,4538,59061,381
117 transmembrane receptor (rhodopsin family)
117 transmembrane receptor (Secretin family)
447041494243289ATPase family associated with various cellular activities (AAA)
446042663946297ABC transporter
55644428ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
15161716151594Elongation factor Tu GTP binding domain
14131110121373Helix-loop-helix DNA-binding domain
816545947Hsp20/alpha crystallin family
836103297102Hsp70 protein
8198711962KH domain
2316SH2 domain
173624191727140SH3 domain
11181120111182Actin
1870261173060321Ankyrin repeat
797137750ADP-ribosylation factor family
224320341726162Eukaryotic aspartyl protease
34333319Cyclic nucleotide-binding domain
112Beta/Gamma crystallin
1121117Cytochrome c
12251018101388Double-stranded RNA binding motif
22715132068EF hand
11134Fe-4S binding domain
2114Fibronectin type III domain
11Globin
92782241585Glutathione S-transferase, C-terminal domain
1121117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
22Hemopexin
131271381164Homeodomain
1113Laminin EGF domain
23242215lactate/malate dehydrogenase, NAD binding domain
610555637Myosin head (motor domain)
9551891244901141,152Cytochrome P450
2242101672481501621,161Protein kinase domain
14331421811101Pyridine nucleotide-disulphide oxidoreductase
2937271163527271Ras family
1313819121277Response regulator receiver domain
75810111096RNase H
657570616370404RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
22222313Iron/manganese superoxide dismutases, alpha-hairpin domain
89562423129Subtilase family
497141462441272Sugar (and other) transporter
1013813121369Thioredoxin
556174542Tubulin/FtsZ family, GTPase domain
432312von Willebrand factor type A domain
48115392725100354Zinc finger, C2H2 type
9884891371238Zinc finger, C3HC4 type (RING finger)
9901814722160Zinc knuckle
32222213Protein-tyrosine phosphatase
1111576817170112689short chain dehydrogenase
478136471647274Zinc-binding dehydrogenase
55486432Thiolase, N-terminal domain
211341324Beta-ketoacyl synthase, N-terminal domain
133113122Fe-2S iron-sulfur cluster binding domain
1111116Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
88788847Glutamine amidotransferase class-I
10161512101073TCP-1/cpn60 chaperonin family
11ATP synthase A chain
33354321Glutamine synthetase, catalytic domain
1111116Triosephosphate isomerase
1917101713985E1-E2 ATPase
132315131422100Core histone H2A/H2B/H3/H4
123Copper binding proteins, plastocyanin/azurin family
1815171071279Alpha amylase, catalytic domain
55455529Phorbol esters/diacylglycerol binding domain (C1 domain)
48442426Bacterial transferase hexapeptide (six repeats)
53344322tRNA synthetases class I (I, L, M and V)
12141716131385Cyclin, N-terminal domain
208020471226205Carboxylesterase family
45244423DNA polymerase family B
34343320ATP synthase subunit C
2141191239Peroxidase
4191163346Beta-lactamase
65454630C-5 cytosine-specific DNA methylase
233525222124150Calcineurin-like phosphoesterase
161472415682Cellulase (glycosyl hydrolase family 5)
68555635tRNA synthetases class II (D, K and N)
394636393737234Mitochondrial carrier protein
22recA bacterial DNA recombination protein
19141216131690Aminotransferase class I and II
49633732Phosphoribosyl transferase domain
183015161414107Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1121117Phosphoglycerate kinase
21222211Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
1111116Chaperonin 10 Kd subunit
11Fibroblast growth factor
172112151718100C2 domain
823201571992PH domain
10961714662bZIP transcription factor
182712161416103Aldehyde dehydrogenase family
76131561656288578Fungal Zn(2)-Cys(6) binuclear cluster domain
213821232025148Cytochrome b5-like Heme/Steroid binding domain
1611110Oxidoreductase molybdopterin binding domain
61351071152Oxidoreductase NAD-binding domain
253420252322149SNF2 family N-terminal domain
21222211Ribosomal protein S7p/S5e
242721222021135Ubiquitin-conjugating enzyme
57655533Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
23222314Hsp90 protein
22222212Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
37353526Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
362314Cupin
415Annexin
2428Eukaryotic-type carbonic anhydrase
464333232-oxoacid dehydrogenases acyltransferase (catalytic domain)
26224218Catalase
1111116Disintegrin
1218632142UDP-glucoronosyl and UDP-glucosyl transferase
513865542Aminotransferase class-III
22222212Ribosomal protein S19
1211117DNA gyrase B
43332419Thiamine pyrophosphate enzyme, central domain
36333321Lyase
23321213Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
14131111Adenylate and Guanylate cyclase catalytic domain
1211117ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
1211128Indole-3-glycerol phosphate synthase
23122212Aromatic amino acid lyase
2111117Pyruvate kinase, barrel domain
1117101191068Kinesin motor domain
323127272930176DnaJ domain
14161515151489Proteasome subunit
21212320Major intrinsic protein
2111117ATP synthase
25121314Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
111115Profilin
22122110Ribosomal protein L22p/L17e
22222212Ribosomal protein L14p/L23e
143316331813127Ubiquitin family
56555733Cofilin/tropomyosin-type actin-binding protein
2432221514-3-3 protein
34111313Alkaline phosphatase
21278222Zinc carboxypeptidase
6113645792460405Aldo/keto reductase family
71816571164Myb-like DNA-binding domain
67585839Forkhead domain
1225Glycosyl hydrolases family 32 N-terminal domain
22122110Ribosomal protein L16p/L10e
22222212Ribosomal protein S14p/S29e
85443529FKBP-type peptidyl-prolyl cis-trans isomerase
111115Glutathione peroxidase
2125
311663736Flavodoxin
1111116Calreticulin family
131113120Common central domain of tyrosinase
1276810952Aminotransferase class-V
23442318Ribonucleotide reductase, small chain
6912055505166411DEAD/DEAH box helicase
9015584777797580Helicase conserved C-terminal domain
11Fructose-bisphosphate aldolase class-I
1211117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
23232214Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111116Ribosomal protein L5
58452731Pyridoxal-dependent decarboxylase conserved domain
43454323Citrate synthase, C-terminal domain
55655531GHMP kinases N terminal domain
57575534Biotin carboxylase, N-terminal domain
1122118Tryptophan synthase alpha chain
897148854Pyridoxal-phosphate dependent enzyme
15221716131497NUDIX domain
76535632pfkB family carbohydrate kinase
81267336Glycosyl hydrolases family 28
23222314Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
12178129967Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
11Lipoxygenase
45644427ATP synthase alpha/beta chain, C terminal domain
47544529Calponin homology (CH) domain
27432523Glutamine amidotransferases class-II
28222218Ribosomal protein S15
1155411137Thaumatin family
1111116Fructose-1-6-bisphosphatase, N-terminal domain
1211117Ribonucleotide reductase, all-alpha domain
22232213Ribosomal protein S2
65263426SRF-type transcription factor (DNA-binding and dimerisation domain)
131615331612105GATA zinc finger
13302413621107Amino acid permease
615586747Prolyl oligopeptidase family
31322112Ribosomal protein L30p/L7e
817856953Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
48454429Aconitase family (aconitate hydratase)
613245535Glycosyl hydrolase family 10
222129Glycosyl hydrolases family 17
22221211Ribosomal protein S5, N-terminal domain
24122213Nucleoside diphosphate kinase
41142113Tetraspanin family
22222212Ribosomal protein S10p/S20e
53283526Arrestin (or S-antigen), N-terminal domain
1112117Phosphoglucose isomerase
2121118Carbohydrate phosphorylase
1111116SecY translocase
1111127Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
710375638Polyprenyl synthetase
22222212Hexokinase
141261311965Dynamin family
1311118Transcription factor TFIID (or TATA-binding protein, TBP)
35333219Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
1113Phytochrome region
1112778954Biotin-requiring enzyme
1111116Phosphofructokinase
22222212Ribosomal protein S17
1111116Hydroxymethylglutaryl-coenzyme A reductase
34323318FGGY family of carbohydrate kinases, N-terminal domain
11Sodium:dicarboxylate symporter family
997126952Enoyl-CoA hydratase/isomerase
11Insect cuticle protein
22222212Ribosomal protein S9/S16
22222212Transcription factor TFIIB repeat
68695640Cytidine and deoxycytidylate deaminase zinc-binding region
1111116Molybdopterin oxidoreductase
71510862975Chromo (CHRromatin Organisation MOdifier) domain
33333419Phosphatidylinositol-specific phospholipase C, Y domain
44445324Phosphatidylinositol-specific phospholipase C, X domain
67654735D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
43321316Malic enzyme, N-terminal domain
12111286-phosphogluconate dehydrogenase, C-terminal domain
945623116100Multicopper oxidase
10117912958WW domain
22222212Ribosomal RNA adenine dimethylase
1123131162231161321,012WD domain, G-beta repeat
43352421Heavy-metal-associated domain
34333319Adenylate kinase
22222111Phosphoglucomutase/phosphomannomutase, C-terminal domain
22122110Ribosomal protein S8
22222111Ribosomal protein S11
67659639LIM domain
43464324Regulator of chromosome condensation (RCC1) repeat
22322213Ribosomal protein S13/S18
22212211chorismate binding enzyme
2244331860s Acidic ribosomal protein
46544427Prenyltransferase and squalene oxidase repeat
47655734Protein kinase C terminal domain
1111116Single-strand binding protein family
1111116S-adenosylmethionine synthetase, N-terminal domain
1516910101171Bromodomain
917697957Acyl-CoA dehydrogenase, C-terminal domain
181614201517100Ubiquitin carboxyl-terminal hydrolase
11114Ribosomal protein L36
12171113Ribonuclease T2 family
46466430HSF-type DNA-binding
23222213SRP54-type protein, GTPase domain
1111127Urease alpha-subunit, N-terminal domain
113262151085Serine carboxypeptidase
910998853Phosphatidylinositol 3- and 4-kinase
33232316Transketolase, thiamine diphosphate binding domain
342110Glycosyl hydrolases family 11
111115WHEP-TRS domain
23222718Inositol monophosphatase family
58444530Glutaredoxin
24622319Isocitrate lyase family
1111116Serine hydroxymethyltransferase
43311416Iron-containing alcohol dehydrogenase
22122211Ribosomal protein L10
66534529KOW motif
111115Ribosomal protein L34
1113Ribosomal protein L33
34233318RF-1 domain
231118Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
111115DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
1111127Glucose-6-phosphate dehydrogenase, NAD binding domain
1412121491374Protein phosphatase 2C
33333116Nucleotidyl transferase
218291234Carbonic anhydrase
1111217Phosphoribulokinase / Uridine kinase family
1119121061371Fatty acid desaturase
66666636MutS domain V
1111116Delta-aminolevulinic acid dehydratase
517431434Arginase family
67666637MCM P-loop domain
31122110Squalene/phytoene synthase
1114111411970FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
318528241831217AMP-binding enzyme
162215421915129G-protein alpha subunit
322817231435149HMG (high mobility group) box
984115946His Kinase A (phospho-acceptor) domain
43332419Armadillo/beta-catenin-like repeat
1818224341327298Tetratricopeptide repeat
44432320Ion transport protein
1211117DNA gyrase/topoisomerase IV, subunit A
6910661047BRCA1 C Terminus (BRCT) domain
56846736Glycosyl transferases group 1
44532422Glycosyl transferase family 2
33241316SAM domain (Sterile alpha motif)
36323320linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
6517432Pectate lyase
23141213ribonuclease
1111127Urease, gamma subunit
33343319CoA-ligase
12317541675Phosphopantetheine attachment site
12222211Formyl transferase
11141112101169Metallopeptidase family M24
11915531659Leucine Rich Repeat
139025221051211alpha/beta hydrolase fold
33334319RNA polymerase Rpb2, domain 6
11EAL domain
55455529PB1 domain
22222212Staphylococcal nuclease homologue
12121012111168Rab-GTPase-TBC domain
1111116Tudor domain
2112219WH1 domain
56344325Zinc finger, ZZ type
211116HRDC domain
8121065950CBS domain
24212213Ribosomal protein L13
22213212Ribosomal protein L4/L1 family
1111116Clp protease
45554427S1 RNA binding domain
2111117HIUase/Transthyretin family
58463834AhpC/TSA family
46544427tRNA synthetases class I (W and Y)
24244117UvrD/REP helicase N-terminal domain
8751210446Rhodanese-like domain
22222212Universal stress protein family
184528351230168Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
22222212AIR synthase related protein, N-terminal domain
66665635tRNA synthetase class II core domain (G, H, P, S and T)
11Phage integrase family
24222214Tetrapyrrole (Corrin/Porphyrin) Methylases
25111212Glycosyl transferase family, a/b domain
13122211Class II Aldolase and Adducin N-terminal domain
45363425Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
67365633Fes/CIP4, and EFC/F-BAR homology domain
26322419IQ calmodulin-binding motif
32322214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
33312315Phospholipase D Active site motif
31144114Regulator of G protein signaling domain
44444424GTPase-activator protein for Ras-like GTPase
95888644RasGEF domain
47746634RasGEF N-terminal motif
13141113121376RhoGAP domain
171914231513101RhoGEF domain
36444425SPRY domain
44333320RNA polymerase Rpb1, domain 2
1111116Guanylate kinase
35445324Gelsolin repeat
723757958UBA/TS-N domain
13211416121591PHD-finger
2111229GGL domain
65558635HECT-domain (ubiquitin-transferase)
112127Helix-hairpin-helix motif
2121129MSP (Major sperm protein) domain
510634634Ribonuclease III domain
42242216Region in Clathrin and VPS
43143419RanBP1 domain
1221129PPIC-type PPIASE domain
4322415Zn-finger in Ran binding protein and others
13332010928113Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1111116B-box zinc finger
91031051047Poly(ADP-ribose) polymerase catalytic domain
22241213Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
372207019920264810F-box domain
11116111Elongation factor 1 gamma, conserved domain
18281222Calpain family cysteine protease
32233316Copper fist DNA binding domain
7106116545CRAL/TRIO domain
6688561621175BTB/POZ domain
872326964Ricin-type beta-trefoil lectin domain
1111116Inhibitor of Apoptosis domain
33333318Voltage gated chloride channel
82851861176Caspase domain
622184849GDSL-like Lipase/Acylhydrolase
32112211Poly-adenylate binding protein, unique domain
1211117POLO box duplicated region
212420391924147ABC transporter transmembrane region
37364326FAD binding domain
77411727Condensation domain
1111116S-adenosyl-L-homocysteine hydrolase, NAD binding domain
22141111HAMP domain
22222212ribosomal L5P family C-terminus
665106538Insulinase (Peptidase family M16)
441054431Dehydrogenase E1 component
1111116Lumazine binding domain
79897747Elongation factor G C-terminus
48444428HMGL-like
44434423DnaJ central domain
13741117Starch binding domain
42323216Ribosomal protein L1p/L10e family
86375433Cation transporting ATPase, C-terminus
78575537Cation transporter/ATPase, N-terminus
1112117dUTPase
49444429Aconitase C-terminal domain
33433319Amino acid kinase family
1111116N-(5'phosphoribosyl)anthranilate (PRA) isomerase
213441428Acyl transferase domain
1111127Urease beta subunit
34233217Dihydrodipicolinate synthetase family
124123131130130haloacid dehalogenase-like hydrolase
54132318Glycosyl hydrolases family 2
151813971476Glycosyl hydrolases family 18
1112117Proliferating cell nuclear antigen, N-terminal domain
112Translation initiation factor IF-3, C-terminal domain
111115Acylphosphatase
1111116Adenylosuccinate synthetase
1111116Asparaginase, N-terminal
34274222Peptidase S24-like
1111116Inorganic pyrophosphatase
1654118549Glycosyl hydrolases family 16
35322318Glycosyl hydrolases family 15
5471217322106NADH:flavin oxidoreductase / NADH oxidase family
11111163-hydroxyacyl-CoA dehydrogenase, C-terminal domain
53321519Glycosyl hydrolase family 20, catalytic domain
66754533HhH-GPD superfamily base excision DNA repair protein
1311118AIR carboxylase
278312372723209GMC oxidoreductase
33223215Asparagine synthase
2271119564Fungal cellulose binding domain
77877743Septin
1113118EF-1 guanine nucleotide exchange domain
1112117Homoserine dehydrogenase
49392229Flavin-binding monooxygenase-like
37433323tRNA synthetases class I (E and Q), catalytic domain
1121319tRNA synthetases class I (R)
66554733XPG N-terminal domain
61181271357Metallo-beta-lactamase superfamily
11114F5/8 type C domain
65444528Choline/Carnitine o-acyltransferase
1111116Putative esterase
111115Glycosyl hydrolase family 9
1111116Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33333318RNB domain
672112735Dioxygenase
874226653CNH domain
33222214Diacylglycerol kinase catalytic domain
11161317151284Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
26443423P21-Rho-binding domain
14151515151589PX domain
35222216Ras association (RalGDS/AF-6) domain
44433422UBX domain
54565530VHS domain
1111116Phosphoinositide 3-kinase C2
23232214DAHP synthetase I family
411454432Carbon-nitrogen hydrolase
14117N-acetyltransferase
1111116Prephenate dehydratase
35453323Syntaxin
55647532Pumilio-family RNA binding repeat
813676545Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1211117Pterin binding enzyme
1111116ER lumen protein retaining receptor
23222213Glycoprotease family
1111116Histidinol dehydrogenase
33333318impB/mucB/samB family
1214
1111116Ribosomal L15
31133112Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1211117Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1111116Ribosomal S17
3111118Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
29462225Glycosyl hydrolase family 7
37231319RNA pseudouridylate synthase
761166743Histone deacetylase domain
610112323POT family
22222212PWWP domain
322818242027149SET domain
67494535Isochorismatase family
25121213Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
1518556857XPG I-region
11114Acetokinase family
1111116DNA photolyase
11114Cation-independent mannose-6-phosphate receptor repeat
33Nitroreductase family
14111210Cytosol aminopeptidase family, catalytic domain
2431212Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
33383323Acyl CoA binding protein
586115641Cullin family
1111116Elongation factor TS
46522423FAD binding domain
916141371069O-methyltransferase domain
45334423EamA-like transporter family
3227
88788746ThiF family
1111116Ribosomal family S4e
1311118Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
45232319Ammonium Transporter Family
85536431Sulfate permease family
1112117MATH domain
23222213Dehydratase family
411321324Transaldolase/Fructose-6-phosphate aldolase
33133316Mechanosensitive ion channel
31122110GTP cyclohydrolase II
151111103,4-dihydroxy-2-butanone 4-phosphate synthase
44544425Adaptor complexes medium subunit family
7877635Exonuclease
1112218Dipeptidyl peptidase IV (DPP IV) N-terminal region
11201122NB-ARC domain
1020131071272Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
1113Sodium:sulfate symporter transmembrane region
2211118DNA-dependent RNA polymerase
1111116Glycosyl transferase family 4
1112117HCO3- transporter family
42244319Nucleosome assembly protein (NAP)
44445425Synaptobrevin
1112117GMP synthase C terminal domain
213Phage lysozyme
55363426Adenosine/AMP deaminase
35333825Oxidoreductase FAD-binding domain
1311219Thioesterase domain
22222212Histidine biosynthesis protein
35333320Glycosyltransferase family 20
1111116UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
12115PAS fold
23121211Probable molybdopterin binding domain
44454425Sec1 family
22222111GDP dissociation inhibitor
69687642Sodium/hydrogen exchanger family
23222213RNA polymerase Rpb3/RpoA insert domain
33444321Initiation factor 2 subunit family
1113PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
11114Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
1111116GTP1/OBG
49443428Gamma-glutamyltranspeptidase
1113Ribosomal L40e family
1111116GrpE
35333219TatD related DNase
2