PFAM Domains • Polyporus brumalis BRFM 1820 v1.0
Annotations/GenomesDicsq1Gansp1Leisp1Lenti6_1Polar1Polbr1Pycsa1Tralj1TotalAnnotation Description
PFAMs
8,0728,2658,2428,8429,1439,1628,0327,84767,605
4442434648494141354ATPase family associated with various cellular activities (AAA)
3839415148473939342ABC transporter
4444444432ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
1414141415141515115Elongation factor Tu GTP binding domain
101211111111111188Helix-loop-helix DNA-binding domain
1491111111010985Hsp20/alpha crystallin family
14981111971281Hsp70 protein
14888887869KH domain
11111117SH2 domain
2428252524242724201SH3 domain
101011101010101081Actin
1724232424242527188Ankyrin repeat
7777778959ADP-ribosylation factor family
4449574749564740389Eukaryotic aspartyl protease
3333333223Cyclic nucleotide-binding domain
111111118Cytochrome c
77108987965Double-stranded RNA binding motif
1920192019191919154EF hand
1111112194Fe-4S binding domain
11112118Fibronectin type III domain
111111118Globin
1818261922212015159Glutathione S-transferase, C-terminal domain
1212111110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
112Hemopexin
71210191615101099Homeodomain
111115Laminin EGF domain
2222222216lactate/malate dehydrogenase, NAD binding domain
11Lipocalin / cytosolic fatty-acid binding protein family
6565565543Myosin head (motor domain)
1722031861912021941291241,401Cytochrome P450
1471601671851881951841741,400Protein kinase domain
1617181917171615135Pyridine nucleotide-disulphide oxidoreductase
2225242424242424191Ras family
8899999970Response regulator receiver domain
8218174820366155RNase H
6059687071706969536RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
167Reverse transcriptase (RNA-dependent DNA polymerase)
111111118Copper/zinc superoxide dismutase (SODC)
3224562226Iron/manganese superoxide dismutases, alpha-hairpin domain
6575444944Subtilase family
3131303434323030252Sugar (and other) transporter
8991010148876Thioredoxin
5545775543Tubulin/FtsZ family, GTPase domain
4232322321von Willebrand factor type A domain
5056575962665661467Zinc finger, C2H2 type
5959676967706763521Zinc finger, C3HC4 type (RING finger)
3140191916171920181Zinc knuckle
2222223217Protein-tyrosine phosphatase
8285901191281278978798short chain dehydrogenase
6445586968734953479Zinc-binding dehydrogenase
4544444433Thiolase, N-terminal domain
4542452430Beta-ketoacyl synthase, N-terminal domain
23333323222Fe-2S iron-sulfur cluster binding domain
111111118Enolase, C-terminal TIM barrel domain
7789888863Glutamine amidotransferase class-I
101010101110101283TCP-1/cpn60 chaperonin family
3334333325Glutamine synthetase, catalytic domain
111111118Triosephosphate isomerase
1418111515151012110E1-E2 ATPase
1916161818201616139Core histone H2A/H2B/H3/H4
11114Copper binding proteins, plastocyanin/azurin family
8767886656Alpha amylase, catalytic domain
6666666648Phorbol esters/diacylglycerol binding domain (C1 domain)
5554345536Bacterial transferase hexapeptide (six repeats)
3333343325tRNA synthetases class I (I, L, M and V)
121311151012101194Cyclin, N-terminal domain
2425184040421717223Carboxylesterase family
4444444432DNA polymerase family B
3333334628ATP synthase subunit C
1410142421201218133Peroxidase
55861075349Beta-lactamase
4544554435C-5 cytosine-specific DNA methylase
2524252828282427209Calcineurin-like phosphoesterase
121115121112121297Cellulase (glycosyl hydrolase family 5)
7666776651tRNA synthetases class II (D, K and N)
3740373837413837305Mitochondrial carrier protein
1817172021202018151Aminotransferase class I and II
6677777653Phosphoribosyl transferase domain
1214141414151414111Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
2222222216Ribosomal protein S4/S9 N-terminal domain
2222222216Ribosomal protein S12/S23
111111118Chaperonin 10 Kd subunit
1212151619131413114C2 domain
2220232323252121178PH domain
5556664542bZIP transcription factor
1919201423181716146Aldehyde dehydrogenase family
7782809592946476660Fungal Zn(2)-Cys(6) binuclear cluster domain
2322242524252225190Cytochrome b5-like Heme/Steroid binding domain
3344444430Oxidoreductase molybdopterin binding domain
121212121212131398Oxidoreductase NAD-binding domain
2122202420202321171SNF2 family N-terminal domain
2222222216Ribosomal protein S7p/S5e
2021202121212021165Ubiquitin-conjugating enzyme
5555555540Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
2242222218Hsp90 protein
2223222217Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111117Dihydrofolate reductase
1124Chitin recognition protein
2725552230Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
7576776550Cupin
33333333242-oxoacid dehydrogenases acyltransferase (catalytic domain)
3343583332Catalase
111111118Disintegrin
671668821577UDP-glucoronosyl and UDP-glucosyl transferase
5556555541Aminotransferase class-III
2222222216Ribosomal protein S19
211111119DNA gyrase B
4445554536Thiamine pyrophosphate enzyme, central domain
3333333324Lyase
111111118Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
111111118Adenylate and Guanylate cyclase catalytic domain
111121119ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
2221222215Indole-3-glycerol phosphate synthase
3121111111Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
91099898971Kinesin motor domain
2832313332333131251DnaJ domain
1414141414141415113Proteasome subunit
5645554438Major intrinsic protein
111111118ATP synthase
4332222220Glycosyl hydrolase family 1
1111111183'5'-cyclic nucleotide phosphodiesterase
111111118Profilin
1111112210Ribosomal protein L22p/L17e
2222222216Ribosomal protein L14p/L23e
1719181819171817143Ubiquitin family
5555555540Cofilin/tropomyosin-type actin-binding protein
122223221614-3-3 protein
2232222318Alkaline phosphatase
111111118Zinc carboxypeptidase
6148567060585950462Aldo/keto reductase family
1312121214141112100Myb-like DNA-binding domain
5555555540Forkhead domain
211111119Glycosyl hydrolases family 32 N-terminal domain
111111118Ribosomal protein L16p/L10e
1222222215Ribosomal protein S14p/S29e
3333333324FKBP-type peptidyl-prolyl cis-trans isomerase
111111118Glutathione peroxidase
111111129
67681085656Flavodoxin
112Tropomyosin
111111118Calreticulin family
3253331323Common central domain of tyrosinase
771010996765Aminotransferase class-V
222511818250Ribonucleotide reductase, small chain
5246484751525049395DEAD/DEAH box helicase
8975767984879084664Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2223221216Ribosomal protein L23
111111118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111118Ribosomal protein L5
4353334429Pyridoxal-dependent decarboxylase conserved domain
3533333326Citrate synthase, C-terminal domain
5555555540GHMP kinases N terminal domain
6779787758Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
99999109973Pyridoxal-phosphate dependent enzyme
11'Paired box' domain
1515171515151615123NUDIX domain
3333333324pfkB family carbohydrate kinase
71071211117873Glycosyl hydrolases family 28
2222222216Ribosomal protein L3
2222222216Ribosomal protein L11, RNA binding domain
7888998865Histidine phosphatase superfamily (branch 1)
1111322112Thymidylate synthase
112Lipoxygenase
4444444432ATP synthase alpha/beta chain, C terminal domain
4444444432Calponin homology (CH) domain
5555555540Glutamine amidotransferases class-II
2222222216Ribosomal protein S15
410106555550Thaumatin family
111111118Fructose-1-6-bisphosphatase, N-terminal domain
11141052125Ribonucleotide reductase, all-alpha domain
3222222217Ribosomal protein S2
2322222217SRF-type transcription factor (DNA-binding and dimerisation domain)
101191111108878GATA zinc finger
2422242526251921186Amino acid permease
4446554436Prolyl oligopeptidase family
2112222113Ribosomal protein L30p/L7e
1414141413131713112Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4446554436Aconitase family (aconitate hydratase)
5966666650Glycosyl hydrolase family 10
111111118Glycosyl hydrolases family 17
2223222217Ribosomal protein S5, N-terminal domain
2222222216Nucleoside diphosphate kinase
221112110Tetraspanin family
2224222218Ribosomal protein S10p/S20e
7888774756Arrestin (or S-antigen), N-terminal domain
111111118Phosphoglucose isomerase
111111118Carbohydrate phosphorylase
111111118SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
8433443433Polyprenyl synthetase
2222222216Hexokinase
61187889764Dynamin family
1211121110Transcription factor TFIID (or TATA-binding protein, TBP)
3344444430Rieske [2Fe-2S] domain
11Phytochrome region
112Proton-conducting membrane transporter
8899998969Biotin-requiring enzyme
111111118Phosphofructokinase
3222222217Ribosomal protein S17
111211119Hydroxymethylglutaryl-coenzyme A reductase
3434444329FGGY family of carbohydrate kinases, N-terminal domain
881081087968Enoyl-CoA hydratase/isomerase
2222222216Ribosomal protein S9/S16
4323332222Transcription factor TFIIB repeat
6889998764Cytidine and deoxycytidylate deaminase zinc-binding region
112111119Molybdopterin oxidoreductase
1119121017117996Chromo (CHRromatin Organisation MOdifier) domain
111111118Phosphatidylinositol-specific phospholipase C, Y domain
1211211110Phosphatidylinositol-specific phospholipase C, X domain
7668776855D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
3343338330Malic enzyme, N-terminal domain
21223222166-phosphogluconate dehydrogenase, C-terminal domain
1317611111171086Multicopper oxidase
78991098969WW domain
2222342219Ribosomal RNA adenine dimethylase
1921631331461641631671331,261WD domain, G-beta repeat
4754444436Heavy-metal-associated domain
3333333324Adenylate kinase
1222222215Phosphoglucomutase/phosphomannomutase, C-terminal domain
111111118Ribosomal protein S8
111111219Ribosomal protein S11
6666666648LIM domain
11Matrixin
2243445428Regulator of chromosome condensation (RCC1) repeat
1222222215Ribosomal protein S13/S18
3222222217chorismate binding enzyme
332322232060s Acidic ribosomal protein
11ATP synthase B/B' CF(0)
4444544433Prenyltransferase and squalene oxidase repeat
66710667654Protein kinase C terminal domain
111111118Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
81010101110101079Bromodomain
10889101011975Acyl-CoA dehydrogenase, C-terminal domain
1415151414141415115Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
2232222217Ribonuclease T2 family
5555555540HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
211111119Urease alpha-subunit, N-terminal domain
1818192121212019157Serine carboxypeptidase
8898998867Phosphatidylinositol 3- and 4-kinase
2222222317Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
112WHEP-TRS domain
3622222322Inositol monophosphatase family
4444444432Glutaredoxin
4343444430Isocitrate lyase family
111121119Serine hydroxymethyltransferase
3434333427Iron-containing alcohol dehydrogenase
2223222217Ribosomal protein L10
4444444432KOW motif
111111118Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
3242223321RF-1 domain
2122222215Sodium:solute symporter family
111111118Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
211111119IMP dehydrogenase / GMP reductase domain
111111118Glucose-6-phosphate dehydrogenase, NAD binding domain
7711101110101278Protein phosphatase 2C
3223333322Nucleotidyl transferase
6322541225Carbonic anhydrase
111111118Phosphoribulokinase / Uridine kinase family
91211121011101590Fatty acid desaturase
5666666647MutS domain V
111111118Delta-aminolevulinic acid dehydratase
5345555436Arginase family
6666666648MCM P-loop domain
111111118Squalene/phytoene synthase
1215101513151212104FHA domain
3430343637363727271AMP-binding enzyme
1516151518171414124G-protein alpha subunit
1619181720191721147HMG (high mobility group) box
5556666645His Kinase A (phospho-acceptor) domain
3333334325Armadillo/beta-catenin-like repeat
2628273128282827223Tetratricopeptide repeat
2323333322Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
81110121212131189BRCA1 C Terminus (BRCT) domain
7666666649Glycosyl transferases group 1
3534664435Glycosyl transferase family 2
11111117SAM domain (Sterile alpha motif)
2333333323linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
3113111112ribonuclease
211111119Urease, gamma subunit
3333333324CoA-ligase
979810910971Phosphopantetheine attachment site
2222222216Formyl transferase
101010101112111084Metallopeptidase family M24
1615141616141515121Leucine Rich Repeat
4350484551494946381alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
5555655541PB1 domain
2223422219Staphylococcal nuclease homologue
9810111010101078Rab-GTPase-TBC domain
111111118Tudor domain
2222222115WH1 domain
4638682441Zinc finger, ZZ type
111111129HRDC domain
10999998871CBS domain
2222222216Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
3345333327S1 RNA binding domain
111111118HIUase/Transthyretin family
4445455435AhpC/TSA family
4444444432tRNA synthetases class I (W and Y)
1212221112UvrD/REP helicase N-terminal domain
4445444433Rhodanese-like domain
2222222216Universal stress protein family
3034394443443333300Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
6676666649tRNA synthetase class II core domain (G, H, P, S and T)
112Phage integrase family
2222222216Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
2111111210Class II Aldolase and Adducin N-terminal domain
3333333324Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
4555555438Fes/CIP4, and EFC/F-BAR homology domain
4324334326IQ calmodulin-binding motif
2222222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
3334333325Phospholipase D Active site motif
111111118Regulator of G protein signaling domain
4444444432GTPase-activator protein for Ras-like GTPase
7655555543RasGEF domain
7766666650RasGEF N-terminal motif
1213131313131313103RhoGAP domain
1313131313131213103RhoGEF domain
2444444430SPRY domain
3433333325RNA polymerase Rpb1, domain 2
111111118Guanylate kinase
4334453329Gelsolin repeat
7899879966UBA/TS-N domain
1713191920211816143PHD-finger
1121112211GGL domain
4544444433HECT-domain (ubiquitin-transferase)
2212111111Helix-hairpin-helix motif
111111118MSP (Major sperm protein) domain
7558775549Ribonuclease III domain
2223222217Region in Clathrin and VPS
2444444430RanBP1 domain
3222342220PPIC-type PPIASE domain
5343455433Zn-finger in Ran binding protein and others
2223242725272626200Zinc finger C-x8-C-x5-C-x3-H type (and similar)
111111118B-box zinc finger
2332333221Poly(ADP-ribose) polymerase catalytic domain
2223332219Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
1001151522032402541231131,300F-box domain
111111118Elongation factor 1 gamma, conserved domain
11211118Calpain family cysteine protease
1222221214Copper fist DNA binding domain
6576667750CRAL/TRIO domain
3026233446561826259BTB/POZ domain
8635973243Ricin-type beta-trefoil lectin domain
111111118Inhibitor of Apoptosis domain
3333333425Voltage gated chloride channel
10106810118770Caspase domain
101413129127885GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
111111118POLO box duplicated region
1816212224241819162ABC transporter transmembrane region
246Integrase core domain
5656555441FAD binding domain
2231112214Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111211119HAMP domain
2222222216ribosomal L5P family C-terminus
6666666648Insulinase (Peptidase family M16)
4454445535Dehydrogenase E1 component
111111118Lumazine binding domain
6666667649Elongation factor G C-terminus
4549785547HMGL-like
4444444432DnaJ central domain
2322222217Starch binding domain
2222223217Ribosomal protein L1p/L10e family
7847774549Cation transporting ATPase, C-terminus
71058895658Cation transporter/ATPase, N-terminus
111111118dUTPase
4446554436Aconitase C-terminal domain
3333333324Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
4543682436Acyl transferase domain
211111119Urease beta subunit
2333333323Dihydrodipicolinate synthetase family
3439273537352631264haloacid dehalogenase-like hydrolase
2222222115Glycosyl hydrolases family 2
1420121214141213111Glycosyl hydrolases family 18
111111118Proliferating cell nuclear antigen, N-terminal domain
111111118Acylphosphatase
1111114111Adenylosuccinate synthetase
111111118Asparaginase, N-terminal
2233222218Peptidase S24-like
111111118Inorganic pyrophosphatase
686108105558Glycosyl hydrolases family 16
2322224219Glycosyl hydrolases family 15
1310152123231012127NADH:flavin oxidoreductase / NADH oxidase family
1111111183-hydroxyacyl-CoA dehydrogenase, C-terminal domain
4555555539Glycosyl hydrolase family 20, catalytic domain
5556555642HhH-GPD superfamily base excision DNA repair protein
111211119AIR carboxylase
3735222833342317229GMC oxidoreductase
2222222216Asparagine synthase
1718242221202121164Fungal cellulose binding domain
7666666649Septin
111111118EF-1 guanine nucleotide exchange domain
111111118Homoserine dehydrogenase
4533543229Flavin-binding monooxygenase-like
1113LPXTG cell wall anchor motif
2333333323tRNA synthetases class I (E and Q), catalytic domain
1111221110tRNA synthetases class I (R)
5567775547XPG N-terminal domain
1216141918191415127Metallo-beta-lactamase superfamily
11121118F5/8 type C domain
4444444432Choline/Carnitine o-acyltransferase
111111118Putative esterase
1111116Glycosyl hydrolase family 9
111111118Ferrochelatase
2222222216Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111111118Arginosuccinate synthase
111111118Electron transfer flavoprotein FAD-binding domain
3333333324RNB domain
2634553432Dioxygenase
4545454435CNH domain
2222222216Diacylglycerol kinase catalytic domain
1111121313131314100Dual specificity phosphatase, catalytic domain
111111118MyTH4 domain
3333333324P21-Rho-binding domain
1414141414151314112PX domain
4333333325Ras association (RalGDS/AF-6) domain
4444444