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PFAM Domains • Paracoccidioides brasiliensis Pb03
Annotations/GenomesAspnid1Eurhe1Gymau1Monpu1Monru1Parbr1Penex1Theau1TotalAnnotation Description
PFAMs
9,0748,2127,1347,2857,5465,3159,9627,07961,607
1127 transmembrane receptor (rhodopsin family)
4240414347334443333ATPase family associated with various cellular activities (AAA)
4948384249287234360ABC transporter
5444454434ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
1314141414121414109Elongation factor Tu GTP binding domain
139810108121080Helix-loop-helix DNA-binding domain
5233314425Hsp20/alpha crystallin family
8777747754Hsp70 protein
8888788863KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
111111118SH2 domain
2322232223202323179SH3 domain
10101010109101079Actin
5951933139369534438Ankyrin repeat
21115PAN domain
7787757755ADP-ribosylation factor family
10669839859Eukaryotic aspartyl protease
4444444432Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
11111117Cytochrome c
221221111Double-stranded RNA binding motif
1817171717161518135EF hand
12111211104Fe-4S binding domain
3232321117Fibronectin type III domain
211111119Globin
12131098220781Glutathione S-transferase, C-terminal domain
211112210Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
22Hemopexin
7788757554Homeodomain
4325422224lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
5534554435Myosin head (motor domain)
114777436422712350543Cytochrome P450
1049514211412095113102885Protein kinase domain
191610131461914111Pyridine nucleotide-disulphide oxidoreductase
2323242324182423182Ras family
191710101071910102Response regulator receiver domain
101612323RNase H
6564576260496364484RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
20121Reverse transcriptase (RNA-dependent DNA polymerase)
112Serpin (serine protease inhibitor)
222112111Copper/zinc superoxide dismutase (SODC)
222222214Iron/manganese superoxide dismutases, alpha-hairpin domain
3585548442Subtilase family
106613643462211456484Sugar (and other) transporter
9108995101171Thioredoxin
211111119Trypsin
7454434435Tubulin/FtsZ family, GTPase domain
2231121214von Willebrand factor type A domain
6265535252408857469Zinc finger, C2H2 type
3942394142273638304Zinc finger, C3HC4 type (RING finger)
912522113448Zinc knuckle
2222213216Protein-tyrosine phosphatase
1411146369843915877745short chain dehydrogenase
73783739442110946447Zinc-binding dehydrogenase
7766657751Thiolase, N-terminal domain
37141113185397144Beta-ketoacyl synthase, N-terminal domain
55566545412Fe-2S iron-sulfur cluster binding domain
1222212214Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
8898869965Glutamine amidotransferase class-I
1010109101091078TCP-1/cpn60 chaperonin family
3523323324Glutamine synthetase, catalytic domain
2222212215Triosephosphate isomerase
1813151516131818126E1-E2 ATPase
77117787761Core histone H2A/H2B/H3/H4
125513135141279Alpha amylase, catalytic domain
2223322218Phorbol esters/diacylglycerol binding domain (C1 domain)
1010698812770Bacterial transferase hexapeptide (six repeats)
3333333324tRNA synthetases class I (I, L, M and V)
7778877758Cyclin, N-terminal domain
241712121453611131Carboxylesterase family
444444428DNA polymerase family B
6534426434ATP synthase subunit C
3232224220Peroxidase
817810313454Beta-lactamase
2342232321C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
2827252627173425209Calcineurin-like phosphoesterase
124345211647Cellulase (glycosyl hydrolase family 5)
7877767756tRNA synthetases class II (D, K and N)
3839363636313836290Mitochondrial carrier protein
1113recA bacterial DNA recombination protein
2223171822142915160Aminotransferase class I and II
881010969969Phosphoribosyl transferase domain
1110101010791077Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
211111119Ribosomal protein S4/S9 N-terminal domain
2222222216Ribosomal protein S12/S23
111216Bacterial regulatory helix-turn-helix proteins, AraC family
11111117Chaperonin 10 Kd subunit
111011101012111287C2 domain
2017161819181619143PH domain
101169757863bZIP transcription factor
2828172627103818192Aldehyde dehydrogenase family
305259110187202554071361,661Fungal Zn(2)-Cys(6) binuclear cluster domain
2826212122173122188Cytochrome b5-like Heme/Steroid binding domain
3422233322Oxidoreductase molybdopterin binding domain
171611151382212114Oxidoreductase NAD-binding domain
2422242423212925192SNF2 family N-terminal domain
2222212215Ribosomal protein S7p/S5e
2120212121162021161Ubiquitin-conjugating enzyme
8866639854Isocitrate/isopropylmalate dehydrogenase
2222212215Ribosomal Proteins L2, RNA binding domain
11111117Hsp90 protein
2222222216Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
7310145333Chitin recognition protein
2242222218Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
314412Cupin
3132232117Annexin
11114Eukaryotic-type carbonic anhydrase
112Chalcone and stilbene synthases, N-terminal domain
66Bacterial regulatory proteins, luxR family
34533143262-oxoacid dehydrogenases acyltransferase (catalytic domain)
41135538342Catalase
22111119Disintegrin
141129UDP-glucoronosyl and UDP-glucosyl transferase
87877411658Aminotransferase class-III
1222222215Ribosomal protein S19
111111118DNA gyrase B
686910611662Thiamine pyrophosphate enzyme, central domain
4433325428Lyase
2222222216Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1214Sodium:neurotransmitter symporter family
112Ferritin-like domain
111111118Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
1211211211Orotidine 5'-phosphate decarboxylase / HUMPS family
11111117Indole-3-glycerol phosphate synthase
21216Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
111010101010111082Kinesin motor domain
2726282727242627212DnaJ domain
1514141414111414110Proteasome subunit
5534426231Major intrinsic protein
11111117ATP synthase
3116213Glycosyl hydrolase family 1
1111111183'5'-cyclic nucleotide phosphodiesterase
1111113110Profilin
112111119Ribosomal protein L22p/L17e
2222222216Ribosomal protein L14p/L23e
119121012781079Ubiquitin family
4544427333Cofilin/tropomyosin-type actin-binding protein
222222221614-3-3 protein
4463353331Alkaline phosphatase
2131111111Zinc carboxypeptidase
4031182724104525220Aldo/keto reductase family
1715151314111514114Myb-like DNA-binding domain
4444434431Forkhead domain
344112Glycosyl hydrolases family 32 N-terminal domain
111111118Ribosomal protein L16p/L10e
2222212215Ribosomal protein S14p/S29e
5333324326FKBP-type peptidyl-prolyl cis-trans isomerase
11211118Glutathione peroxidase
1222212214
7776638751Flavodoxin
11Protamine P1
11111117Calreticulin family
9341165332Common central domain of tyrosinase
65855511853Aminotransferase class-V
111111118Ribonucleotide reductase, small chain
3941373838364037306DEAD/DEAH box helicase
7071727470657569566Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222222216Ribosomal protein L23
1222213114Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111118Ribosomal protein L5
6666667649Pyridoxal-dependent decarboxylase conserved domain
3423323323Citrate synthase, C-terminal domain
5565546541GHMP kinases N terminal domain
8878878761Biotin carboxylase, N-terminal domain
121122110Tryptophan synthase alpha chain
14141212139141199Pyridoxal-phosphate dependent enzyme
1417131312101515109NUDIX domain
6565547543pfkB family carbohydrate kinase
112129530Glycosyl hydrolases family 28
22217Luciferase-like monooxygenase
2222222216Ribosomal protein L3
2222222216Ribosomal protein L11, RNA binding domain
91188119161385Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
11Lipoxygenase
5444444433ATP synthase alpha/beta chain, C terminal domain
5555435537Calponin homology (CH) domain
5534445535Glutamine amidotransferases class-II
222222214Ribosomal protein S15
11'Cold-shock' DNA-binding domain
11Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
222222214Ribosomal protein S2
2222522219SRF-type transcription factor (DNA-binding and dimerisation domain)
7644587647GATA zinc finger
5236363938177233323Amino acid permease
6443345332Prolyl oligopeptidase family
2212222215Ribosomal protein L30p/L7e
97799610966Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6745543539Aconitase family (aconitate hydratase)
32213112Glycosyl hydrolase family 10
4332324324Glycosyl hydrolases family 17
2212221113Ribosomal protein S5, N-terminal domain
111111118Nucleoside diphosphate kinase
11Tetraspanin family
1124Galactoside-binding lectin
2222212215Ribosomal protein S10p/S20e
6734546540Arrestin (or S-antigen), N-terminal domain
111111118Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
111111118SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
8663324335Polyprenyl synthetase
5756646544Hexokinase
7797759657Dynamin family
111111118Transcription factor TFIID (or TATA-binding protein, TBP)
9936749451Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
11114Phytochrome region
11Proton-conducting membrane transporter
910981069869Biotin-requiring enzyme
111111118Phosphofructokinase
112111119Ribosomal protein S17
2111212111Hydroxymethylglutaryl-coenzyme A reductase
4445535434FGGY family of carbohydrate kinases, N-terminal domain
11Hemocyanin, copper containing domain
112Sodium:dicarboxylate symporter family
11Prion/Doppel alpha-helical domain
1511158912141094Enoyl-CoA hydratase/isomerase
2222222216Ribosomal protein S9/S16
2222222216Transcription factor TFIIB repeat
7688868758Cytidine and deoxycytidylate deaminase zinc-binding region
2212211112Molybdopterin oxidoreductase
19545455350Chromo (CHRromatin Organisation MOdifier) domain
2221122214Phosphatidylinositol-specific phospholipase C, Y domain
2231122215Phosphatidylinositol-specific phospholipase C, X domain
11889959867D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2213312216Malic enzyme, N-terminal domain
1113PEP-utilising enzyme, mobile domain
22222222166-phosphogluconate dehydrogenase, C-terminal domain
878729748Multicopper oxidase
11Granulin
10991010881175WW domain
111211119Ribosomal RNA adenine dimethylase
11210811110810998113109868WD domain, G-beta repeat
4457636540Heavy-metal-associated domain
3343333426Adenylate kinase
2232222217Phosphoglucomutase/phosphomannomutase, C-terminal domain
1122212213Ribosomal protein S8
11111117Ribosomal protein S11
4444453432LIM domain
11Matrixin
3122211113Regulator of chromosome condensation (RCC1) repeat
2222212215Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2222212215chorismate binding enzyme
333333332460s Acidic ribosomal protein
6644435436Prenyltransferase and squalene oxidase repeat
6767777653Protein kinase C terminal domain
111111118Single-strand binding protein family
1211112110S-adenosylmethionine synthetase, N-terminal domain
6577768753Bromodomain
1512141313101310100Acyl-CoA dehydrogenase, C-terminal domain
1415161514161416120Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
2212212214Ribonuclease T2 family
11Gonadotropin-releasing hormone
3333323323HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
121111119Urease alpha-subunit, N-terminal domain
57366511851Serine carboxypeptidase
6877766754Phosphatidylinositol 3- and 4-kinase
4312213218Transketolase, thiamine diphosphate binding domain
21115Glycosyl hydrolases family 11
3433424427Inositol monophosphatase family
4454424431Glutaredoxin
5525525534Isocitrate lyase family
2222212215Serine hydroxymethyltransferase
3343323324Iron-containing alcohol dehydrogenase
2222222115Ribosomal protein L10
3453324529KOW motif
11111117Ribosomal protein L34
2312222216RF-1 domain
431553324Sodium:solute symporter family
112111119Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
2111112110IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
6766758651Protein phosphatase 2C
2232222318Nucleotidyl transferase
3113334220Carbonic anhydrase
11111117Phosphoribulokinase / Uridine kinase family
6555438440Fatty acid desaturase
4564466540MutS domain V
111222110Delta-aminolevulinic acid dehydratase
4435515431Arginase family
6666666648MCM P-loop domain
12111118Squalene/phytoene synthase
89710958965FHA domain
6746443944367036382AMP-binding enzyme
3333333324G-protein alpha subunit
7676666751HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1412655416567His Kinase A (phospho-acceptor) domain
3323333323Armadillo/beta-catenin-like repeat
3225302322212523201Tetratricopeptide repeat
2222221215Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
10111111117111183BRCA1 C Terminus (BRCT) domain
89578512862Glycosyl transferases group 1
423564327Glycosyl transferase family 2
11211129SAM domain (Sterile alpha motif)
111111118linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
6311415Pectate lyase
221128ribonuclease
121111119Urease, gamma subunit
4745545438CoA-ligase
38211118226467169Phosphopantetheine attachment site
3433313222Formyl transferase
1298997111075Metallopeptidase family M24
1115111615121315108Leucine Rich Repeat
3032272733143830231alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
3454434431PB1 domain
2222222216Staphylococcal nuclease homologue
111111111110121289Rab-GTPase-TBC domain
111111118Tudor domain
111111118WH1 domain
4544335533Zinc finger, ZZ type
122221212HRDC domain
108999810972CBS domain
2222222216Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
4343333326S1 RNA binding domain
111111118HIUase/Transthyretin family
3323323221AhpC/TSA family
4444444432tRNA synthetases class I (W and Y)
1111127UvrD/REP helicase N-terminal domain
6443333531Rhodanese-like domain
2222222216Universal stress protein family
3523303435184424243Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
7888888863tRNA synthetase class II core domain (G, H, P, S and T)
111111118SpoU rRNA Methylase family
2222322217Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
21111129PDZ domain
5535528437Class II Aldolase and Adducin N-terminal domain
4444433430Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
4555535537Fes/CIP4, and EFC/F-BAR homology domain
5546754541IQ calmodulin-binding motif
2222212215Phosphoinositide 3-kinase family, accessory domain (PIK domain)
6555525538Phospholipase D Active site motif
111221210Regulator of G protein signaling domain
3333333324GTPase-activator protein for Ras-like GTPase
5544445435RasGEF domain
5544445435RasGEF N-terminal motif
7777778757RhoGAP domain
5666676648RhoGEF domain
2322222217SPRY domain
2333333323RNA polymerase Rpb1, domain 2
1211311111Guanylate kinase
5544423431Gelsolin repeat
9677677655UBA/TS-N domain
1717181817151717136PHD-finger
1111116GGL domain
6666655646HECT-domain (ubiquitin-transferase)
2112211212Helix-hairpin-helix motif
111111118MSP (Major sperm protein) domain
4555636539Ribonuclease III domain
2323323321Region in Clathrin and VPS
3333122320RanBP1 domain
2222222216PPIC-type PPIASE domain
2223333119Zn-finger in Ran binding protein and others
1417181513111515118Zinc finger C-x8-C-x5-C-x3-H type (and similar)
2221123215Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
5345753848395942399F-box domain
11111117Elongation factor 1 gamma, conserved domain
2212222215Calpain family cysteine protease
2313223319Copper fist DNA binding domain
8775557549CRAL/TRIO domain
431154481049BTB/POZ domain
11Ricin-type beta-trefoil lectin domain
111111118Inhibitor of Apoptosis domain
3333333324Voltage gated chloride channel
3212213216Caspase domain
115533210544GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
2421152325134016177ABC transporter transmembrane region
162119Integrase core domain
11Cathelicidin
6645548644FAD binding domain
17871014530394Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111111219HAMP domain
2222222216ribosomal L5P family C-terminus
6656656646Insulinase (Peptidase family M16)
3433334427Dehydrogenase E1 component
111111118Lumazine binding domain
5666666647Elongation factor G C-terminus
6645534538HMGL-like
4444423429DnaJ central domain
4113110Starch binding domain
2232223218Ribosomal protein L1p/L10e family
116867810864Cation transporting ATPase, C-terminus
13899107121381Cation transporter/ATPase, N-terminus
111111219dUTPase
5745544539Aconitase C-terminal domain
3333335326Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
3613910144365127Acyl transferase domain
121111119Urease beta subunit
8445528541Dihydrodipicolinate synthetase family
3730313234224336265haloacid dehalogenase-like hydrolase
75522110234Glycosyl hydrolases family 2
198316841514105Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
1113Translation initiation factor IF-3, C-terminal domain
11111117Acylphosphatase
111111118Adenylosuccinate synthetase
2212215116Asparaginase, N-terminal
11Beta defensin
3312233320Peptidase S24-like
2121211212Inorganic pyrophosphatase
85645311547Glycosyl hydrolases family 16
2323313219Glycosyl hydrolases family 15
1012477315563NADH:flavin oxidoreductase / NADH oxidase family
55244183323-hydroxyacyl-CoA dehydrogenase, C-terminal domain
2131133216Glycosyl hydrolase family 20, catalytic domain
4444344431HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
252510131152614129GMC oxidoreductase
4322232321Asparagine synthase
62816Fungal cellulose binding domain
5565535539Septin
111111118EF-1 guanine nucleotide exchange domain
111111118Homoserine dehydrogenase
3222212317Flavin-binding monooxygenase-like
3333334325tRNA synthetases class I (E and Q), catalytic domain
111112119tRNA synthetases class I (R)
5445454334XPG N-terminal domain
171312111071713100Metallo-beta-lactamase superfamily
3115F5/8 type C domain
3232222218Choline/Carnitine o-acyltransferase
2111212111Putative esterase
111111118Ferrochelatase
2222222216Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111112119Arginosuccinate synthase
111111118Electron transfer flavoprotein FAD-binding domain
3333333324RNB domain
10933438545Dioxygenase
2233232219CNH domain
2222222216Diacylglycerol kinase catalytic domain
7788777758Dual specificity phosphatase, catalytic domain
222222