PFAM Domains • Armillaria gallica 21-2 v1.0
Annotations/GenomesArmcep1Armga1Armme1_1Armost1Armosto1Guyne1Gyman1Gymlu1Monpe1_1Ompol1TotalAnnotation Description
PFAMs
15,08210,4008,64810,01513,8478,25811,68910,6745,1716,939100,723
111147 transmembrane receptor (rhodopsin family)
45534248464458423342453ATPase family associated with various cellular activities (AAA)
71656566705082602644599ABC transporter
444444542439ATP synthase alpha/beta family, nucleotide-binding domain
224EGF-like domain
1515151515152417915155Elongation factor Tu GTP binding domain
1413131415111415912130Helix-loop-helix DNA-binding domain
137910117975785Hsp20/alpha crystallin family
12981010829998112Hsp70 protein
887888983774KH domain
11112118SH2 domain
19312931213431361527274SH3 domain
1311131111121911712120Actin
197033491127621111327422Ankyrin repeat
213PAN domain
886887784771ADP-ribosylation factor family
3032293028193239724270Eukaryotic aspartyl protease
454444332336Cyclic nucleotide-binding domain
111111111110Cytochrome c
1114678613112583Double-stranded RNA binding motif
32020224201817916149EF hand
1222131322194Fe-4S binding domain
11111117Fibronectin type III domain
101089772513910108Glutathione S-transferase, C-terminal domain
211111111111Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
1113911111111911097Homeodomain
22Laminin EGF domain
233323332327lactate/malate dehydrogenase, NAD binding domain
545655979459Myosin head (motor domain)
3253242462742711663192632091182,515Cytochrome P450
274221154226259158272186991231,972Protein kinase domain
1217171614152033715166Pyridine nucleotide-disulphide oxidoreductase
26252225272533281824253Ras family
1112111213101111511107Response regulator receiver domain
192362132236512147RNase H
68777170667279752968675RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
485273361394892Reverse transcriptase (RNA-dependent DNA polymerase)
54444829Copper/zinc superoxide dismutase (SODC)
222322222322Iron/manganese superoxide dismutases, alpha-hairpin domain
1910612226357595Subtilase family
59474343514677546233515Sugar (and other) transporter
1917121615141212109136Thioredoxin
5555451265557Tubulin/FtsZ family, GTPase domain
53631514248von Willebrand factor type A domain
4711256954397961011127685Zinc finger, C2H2 type
15994698136779741039540Zinc finger, C3HC4 type (RING finger)
26936195801771728472314886Zinc knuckle
322232262226Protein-tyrosine phosphatase
1521491221431379516115251631,225short chain dehydrogenase
39424143403992591645456Zinc-binding dehydrogenase
544454555445Thiolase, N-terminal domain
61061010510106578Beta-ketoacyl synthase, N-terminal domain
1323134313242Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
111111111110Enolase, C-terminal TIM barrel domain
988787976877Glutamine amidotransferase class-I
10101110101010121010103TCP-1/cpn60 chaperonin family
555454432441Glutamine synthetase, catalytic domain
111111111110Triosephosphate isomerase
1813121318141212128132E1-E2 ATPase
16211619191839271016201Core histone H2A/H2B/H3/H4
144613221Copper binding proteins, plastocyanin/azurin family
121212121311181239114Alpha amylase, catalytic domain
563756652550Phorbol esters/diacylglycerol binding domain (C1 domain)
663455652547Bacterial transferase hexapeptide (six repeats)
755753447350tRNA synthetases class I (I, L, M and V)
91061011112415213111Cyclin, N-terminal domain
37373342363381484820415Carboxylesterase family
544444542440DNA polymerase family B
333333331328ATP synthase subunit C
12111012126331387124Peroxidase
4313321455242Beta-lactamase
855765574355C-5 cytosine-specific DNA methylase
27302530242731301025259Calcineurin-like phosphoesterase
191111121861416710124Cellulase (glycosyl hydrolase family 5)
565555788660tRNA synthetases class II (D, K and N)
42443241434240404335402Mitochondrial carrier protein
11recA bacterial DNA recombination protein
18201420201619231316179Aminotransferase class I and II
476737674657Phosphoribosyl transferase domain
14151215141417201011142Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111121111Phosphoglycerate kinase
12132212216Ribosomal protein S4/S9 N-terminal domain
222322222221Ribosomal protein S12/S23
222222111116Chaperonin 10 Kd subunit
1617141716152117816157C2 domain
1222172011202020416162PH domain
1287797582974bZIP transcription factor
27282023262122372315242Aldehyde dehydrogenase family
671244812279113134108730832Fungal Zn(2)-Cys(6) binuclear cluster domain
23252324232232221018222Cytochrome b5-like Heme/Steroid binding domain
232222322323Oxidoreductase molybdopterin binding domain
101081098181231098Oxidoreductase NAD-binding domain
28272326262628291924256SNF2 family N-terminal domain
222222122118Ribosomal protein S7p/S5e
22242123242127251321221Ubiquitin-conjugating enzyme
555555773653Isocitrate/isopropylmalate dehydrogenase
322222322222Ribosomal Proteins L2, RNA binding domain
222222924229Hsp90 protein
23233223222Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
11Chitin recognition protein
566676645455Cysteine-rich secretory protein family
111111111110Ribosomal protein S3, C-terminal domain
6665231032245Cupin
111121261218Annexin
134Eukaryotic-type carbonic anhydrase
3333333353322-oxoacid dehydrogenases acyltransferase (catalytic domain)
4459154355357Catalase
1111111119Disintegrin
41214121113553UDP-glucoronosyl and UDP-glucosyl transferase
766666453554Aminotransferase class-III
62222222222Ribosomal protein S19
111111221112DNA gyrase B
333335341331Thiamine pyrophosphate enzyme, central domain
445444441438Lyase
2242223222252Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11111122111Adenylate and Guanylate cyclase catalytic domain
1111111119ATP synthase delta (OSCP) subunit
111111111110Orotidine 5'-phosphate decarboxylase / HUMPS family
332222222222Indole-3-glycerol phosphate synthase
333343233229Aromatic amino acid lyase
111111111110Pyruvate kinase, barrel domain
121112101010151189108Kinesin motor domain
29312933303033311326285DnaJ domain
1414141414141714914138Proteasome subunit
556554664349Major intrinsic protein
111111221112ATP synthase
191410101041137391Glycosyl hydrolase family 1
1111111111103'5'-cyclic nucleotide phosphodiesterase
111111111110Profilin
221222121217Ribosomal protein L22p/L17e
231222221219Ribosomal protein L14p/L23e
2125152422182215414180Ubiquitin family
556555552548Cofilin/tropomyosin-type actin-binding protein
22222272122414-3-3 protein
134313124123Alkaline phosphatase
111111111110Zinc carboxypeptidase
72615057573987653743568Aldo/keto reductase family
71310138132122617130Myb-like DNA-binding domain
10969107584371Forkhead domain
213Glycosyl hydrolases family 32 N-terminal domain
41112111113Ribosomal protein L16p/L10e
22222221217Ribosomal protein S14p/S29e
45555544441FKBP-type peptidyl-prolyl cis-trans isomerase
12111211111Glutathione peroxidase
11111117
69810761272774Flavodoxin
11Protamine P1
111111112111Calreticulin family
151211131472133595Common central domain of tyrosinase
9979887125680Aminotransferase class-V
81527142652263Ribonucleotide reductase, small chain
77554651724586522749560DEAD/DEAH box helicase
1009486949285120983483886Helicase conserved C-terminal domain
11114Fructose-bisphosphate aldolase class-I
21111111110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222218Ribosomal protein L23
11111123314Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111111110Ribosomal protein L5
655563753449Pyridoxal-dependent decarboxylase conserved domain
433343434334Citrate synthase, C-terminal domain
554555662548GHMP kinases N terminal domain
667656663657Biotin carboxylase, N-terminal domain
111111121111Tryptophan synthase alpha chain
8878888910781Pyridoxal-phosphate dependent enzyme
1315101512151818612134NUDIX domain
554555651344pfkB family carbohydrate kinase
181821161516191948154Glycosyl hydrolases family 28
2222221722235Ribosomal protein L3
22222222218Ribosomal protein L11, RNA binding domain
13125121310141166102Histidine phosphatase superfamily (branch 1)
111111111110Thymidylate synthase
123Lipoxygenase
444444442438ATP synthase alpha/beta chain, C terminal domain
453445553543Calponin homology (CH) domain
265524668549Glutamine amidotransferases class-II
223222221220Ribosomal protein S15
4554449117356Thaumatin family
111111111110Fructose-1-6-bisphosphatase, N-terminal domain
111211711218Ribonucleotide reductase, all-alpha domain
222222222220Ribosomal protein S2
122222631223SRF-type transcription factor (DNA-binding and dimerisation domain)
10108119102022510115GATA zinc finger
14322132162941342220261Amino acid permease
1315Bacterial regulatory proteins, crp family
6655651563562Prolyl oligopeptidase family
211111112112Ribosomal protein L30p/L7e
89998912145891Histidine phosphatase superfamily (branch 2)
111111111110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
555565553549Aconitase family (aconitate hydratase)
666664759459Glycosyl hydrolase family 10
22122244221Glycosyl hydrolases family 17
222222221219Ribosomal protein S5, N-terminal domain
222222321220Nucleoside diphosphate kinase
22122123116Tetraspanin family
21112122214Ribosomal protein S10p/S20e
411242221221Arrestin (or S-antigen), N-terminal domain
111111112111Phosphoglucose isomerase
112111214115Carbohydrate phosphorylase
111111111110SecY translocase
11111121110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222222220Ribosomal protein L6
2918121116461057118Polyprenyl synthetase
222222223221Hexokinase
16126101281071486Dynamin family
11121111110Transcription factor TFIID (or TATA-binding protein, TBP)
132322532326Rieske [2Fe-2S] domain
111115Phytochrome region
898998996883Biotin-requiring enzyme
111111113112Phosphofructokinase
221222221117Ribosomal protein S17
2111111211122Hydroxymethylglutaryl-coenzyme A reductase
344433442435FGGY family of carbohydrate kinases, N-terminal domain
11Sodium:dicarboxylate symporter family
91010998101431092Enoyl-CoA hydratase/isomerase
222222221219Ribosomal protein S9/S16
222323223223Transcription factor TFIIB repeat
6839710681361Cytidine and deoxycytidylate deaminase zinc-binding region
111111111110Molybdopterin oxidoreductase
3411165823571610297729Chromo (CHRromatin Organisation MOdifier) domain
33333333226Phosphatidylinositol-specific phospholipase C, Y domain
533353432334Phosphatidylinositol-specific phospholipase C, X domain
665666962759D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
33333233225Malic enzyme, N-terminal domain
1111111211116-phosphogluconate dehydrogenase, C-terminal domain
2626262525192519188217Multicopper oxidase
71310147108122891WW domain
221222521120Ribosomal RNA adenine dimethylase
139130102120121113261406701141,576WD domain, G-beta repeat
443445441235Heavy-metal-associated domain
333333431329Adenylate kinase
21112111111Phosphoglucomutase/phosphomannomutase, C-terminal domain
211121111112Ribosomal protein S8
222222221219Ribosomal protein S11
562556462546LIM domain
11Matrixin
544354331537Regulator of chromosome condensation (RCC1) repeat
222222222220Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
11REV protein (anti-repression trans-activator protein)
222222222321chorismate binding enzyme
33333344133060s Acidic ribosomal protein
443444446542Prenyltransferase and squalene oxidase repeat
466646872857Protein kinase C terminal domain
1111111119Single-strand binding protein family
111111111110S-adenosylmethionine synthetase, N-terminal domain
1010111010101411610102Bromodomain
11Bacterial regulatory proteins, tetR family
77777710114774Acyl-CoA dehydrogenase, C-terminal domain
1818161515151515415146Ubiquitin carboxyl-terminal hydrolase
1113Ribosomal protein L36
222222331120Ribonuclease T2 family
555555553447HSF-type DNA-binding
222222221219SRP54-type protein, GTPase domain
111111111110Urease alpha-subunit, N-terminal domain
18161815181622152112171Serine carboxypeptidase
1113Apoptosis regulator proteins, Bcl-2 family
8888881584883Phosphatidylinositol 3- and 4-kinase
445444135337Transketolase, thiamine diphosphate binding domain
1121164218Glycosyl hydrolases family 11
11111117WHEP-TRS domain
664574533346Inositol monophosphatase family
55555555545Glutaredoxin
233323654334Isocitrate lyase family
223222141120Serine hydroxymethyltransferase
674667332347Iron-containing alcohol dehydrogenase
22122113115Ribosomal protein L10
455535552544KOW motif
111115Ribosomal protein L34
112Ribosomal protein L33
22122222217RF-1 domain
33144442328Sodium:solute symporter family
111111118Imidazoleglycerol-phosphate dehydratase
11111121110DNA polymerase family A
111111112111IMP dehydrogenase / GMP reductase domain
111111251317Glucose-6-phosphate dehydrogenase, NAD binding domain
1298111210151359104Protein phosphatase 2C
332333331226Nucleotidyl transferase
767773442249Carbonic anhydrase
21111111110Phosphoribulokinase / Uridine kinase family
181815201715209913154Fatty acid desaturase
866676976667MutS domain V
111111111110Delta-aminolevulinic acid dehydratase
555556554550Arginase family
666666766661MCM P-loop domain
211121112113Squalene/phytoene synthase
151291212111514411115FHA domain
84715669744667773236612AMP-binding enzyme
20221921201530251314199G-protein alpha subunit
2930262626212528414229HMG (high mobility group) box
786887882870His Kinase A (phospho-acceptor) domain
3434332122238Armadillo/beta-catenin-like repeat
214132321931102641825385Tetratricopeptide repeat
333484332336Ion transport protein
111111241114DNA gyrase/topoisomerase IV, subunit A
11Binding-protein-dependent transport system inner membrane component
7118119111296892BRCA1 C Terminus (BRCT) domain
7981076883672Glycosyl transferases group 1
45443446337Glycosyl transferase family 2
12122222216SAM domain (Sterile alpha motif)
44444434334linker histone H1 and H5 family
111111111110Ribosomal protein L7/L12 C-terminal domain
65556237140Pectate lyase
541452131127ribonuclease
111111111110Urease, gamma subunit
333333443332CoA-ligase
2318131522122416614163Phosphopantetheine attachment site
332333221123Formyl transferase
18199141791110810125Metallopeptidase family M24
3148142121720615111Leucine Rich Repeat
31745977244973542337501alpha/beta hydrolase fold
333333333330RNA polymerase Rpb2, domain 6
555555643447PB1 domain
222222221219Staphylococcal nuclease homologue
1210710131111132998Rab-GTPase-TBC domain
111111111110Tudor domain
1121117WH1 domain
663555441342Zinc finger, ZZ type
11121111110HRDC domain
6137106101084882CBS domain
222222222220Ribosomal protein L13
222222221219Ribosomal protein L4/L1 family
111111118Clp protease
34233363330S1 RNA binding domain
11112111110HIUase/Transthyretin family
8888879104676AhpC/TSA family
445444544442tRNA synthetases class I (W and Y)
71117111121UvrD/REP helicase N-terminal domain
953396461450Rhodanese-like domain
222222221219Universal stress protein family
1831223119275540920272Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
1111111119C-terminal regulatory domain of Threonine dehydratase
222222221219AIR synthase related protein, N-terminal domain
667656762657tRNA synthetase class II core domain (G, H, P, S and T)
11114Phage integrase family
652443441336Tetrapyrrole (Corrin/Porphyrin) Methylases
111111221112Glycosyl transferase family, a/b domain
2222231063234Class II Aldolase and Adducin N-terminal domain
443444442437Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
766666664558Fes/CIP4, and EFC/F-BAR homology domain
234423431329IQ calmodulin-binding motif
222222721224Phosphoinositide 3-kinase family, accessory domain (PIK domain)
133423441328Phospholipase D Active site motif
411141211117Regulator of G protein signaling domain
443444462439GTPase-activator protein for Ras-like GTPase
877786963667RasGEF domain
787877772767RasGEF N-terminal motif
1415131513111211711122RhoGAP domain
1817141720151919413156RhoGEF domain
444444543339SPRY domain
333333852336RNA polymerase Rpb1, domain 2
1111111119Guanylate kinase
444444341436Gelsolin repeat
489858794971UBA/TS-N domain
1218122013162117314146PHD-finger
1111116GGL domain
555555564550HECT-domain (ubiquitin-transferase)
133432111120Helix-hairpin-helix motif
22BRCA2 repeat
1111111119MSP (Major sperm protein) domain
59666810103568Ribonuclease III domain
4222421421235Region in Clathrin and VPS
433343331229RanBP1 domain
12221212215PPIC-type PPIASE domain
23233334326Zn-finger in Ran binding protein and others
1641243414293028719242Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1111111119B-box zinc finger
6635341254351Poly(ADP-ribose) polymerase catalytic domain
221222521120Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
44234972454512624618526471,295F-box domain
111111411113Elongation factor 1 gamma, conserved domain
141212125221Calpain family cysteine protease
122123314Copper fist DNA binding domain
77577793778101CRAL/TRIO domain
472319284713111017206BTB/POZ domain
144411742331Ricin-type beta-trefoil lectin domain
1111111119Inhibitor of Apoptosis domain
342333333330Voltage gated chloride channel
1851779511814029132026785Caspase domain
111281110812113591GDSL-like Lipase/Acylhydrolase
22222122217Poly-adenylate binding protein, unique domain
111111