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PFAM Domains • Heterodoassansia hygrophilae CBS 346.65 v1.0
Annotations/GenomesAcain1Cersp1Exomac1Exova1Hethyg1Jamsp1Meimi1Rhodsp1Tilalb1Tilan2Tillet1Tilwa1TotalAnnotation Description
PFAMs
6,4415,6899,3205,9786,7135,3305,9125,3757,5195,2528,1185,45577,102
1111111111107 transmembrane receptor (rhodopsin family)
323146343032333232303131394ATPase family associated with various cellular activities (AAA)
323241293125263034314333387ABC transporter
44544444434448ATP synthase alpha/beta family, nucleotide-binding domain
141318141514141415131413171Elongation factor Tu GTP binding domain
111112898981111109117Helix-loop-helix DNA-binding domain
11111121110Hsp20/alpha crystallin family
77977777779788Hsp70 protein
881077878888895KH domain
1111116SH2 domain
222417211423222316201322237SH3 domain
101010109101010108109116Actin
1417216151716116315132Ankyrin repeat
132111110PAN domain
76988666868785ADP-ribosylation factor family
1011141391511111310267150Eukaryotic aspartyl protease
33333333333336Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
112Cytochrome b/b6/petB
11111111111112Cytochrome c
22421122211323Double-stranded RNA binding motif
16151151161513116215126EF hand
1111111184Fe-4S binding domain
111111118Fibronectin type III domain
108101047975511894Glutathione S-transferase, C-terminal domain
1111111111111Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
56756676446567Homeodomain
22322222222225lactate/malate dehydrogenase, NAD binding domain
45845545555560Myosin head (motor domain)
362227261512221126144321275Cytochrome P450
10396126939294103951019198941,186Protein kinase domain
161317141214141311111310158Pyridine nucleotide-disulphide oxidoreductase
222236232422222226232322287Ras family
13101817111010121291410146Response regulator receiver domain
23614944111137RNase H
555661584655545652564954652RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
42222232222328Iron/manganese superoxide dismutases, alpha-hairpin domain
6611374366730594Subtilase family
392038212126393039193421347Sugar (and other) transporter
11912810999109108114Thioredoxin
11Trypsin
44544444445450Tubulin/FtsZ family, GTPase domain
11311111212von Willebrand factor type A domain
312918351325282410301228283Zinc finger, C2H2 type
363143483732375361032302Zinc finger, C3HC4 type (RING finger)
1110798107118676100Zinc knuckle
22222222223124Protein-tyrosine phosphatase
895079663540564353335740641short chain dehydrogenase
412833361820252531182429328Zinc-binding dehydrogenase
66666566757571Thiolase, N-terminal domain
96123311532238Beta-ketoacyl synthase, N-terminal domain
442424431534402Fe-2S iron-sulfur cluster binding domain
1111112111112Enolase, C-terminal TIM barrel domain
1113Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
771278777978793Glutamine amidotransferase class-I
9914910999109109116TCP-1/cpn60 chaperonin family
11ATP synthase A chain
11222111211116Glutamine synthetase, catalytic domain
22422222122225Triosephosphate isomerase
131221121712121218121713171E1-E2 ATPase
88910888899167108Core histone H2A/H2B/H3/H4
11Bacterial regulatory helix-turn-helix protein, lysR family
1113Copper binding proteins, plastocyanin/azurin family
54343373333445Alpha amylase, catalytic domain
34232534454544Phorbol esters/diacylglycerol binding domain (C1 domain)
56654554544659Bacterial transferase hexapeptide (six repeats)
33534333434341tRNA synthetases class I (I, L, M and V)
86121010788106107102Cyclin, N-terminal domain
181298886683148108Carboxylesterase family
44543444444448DNA polymerase family B
22232222222225ATP synthase subunit C
22232222222225Peroxidase
314322326127Beta-lactamase
2252221223225C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
202029212021212022182020252Calcineurin-like phosphoesterase
7111351163412414797Cellulase (glycosyl hydrolase family 5)
76867565655672tRNA synthetases class II (D, K and N)
373547393634373536373534442Mitochondrial carrier protein
191322141415171414151314184Aminotransferase class I and II
77464677474669Phosphoribosyl transferase domain
99121081010101110139121Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111111112Phosphoglycerate kinase
22422222222226Ribosomal protein S4/S9 N-terminal domain
12222222222223Ribosomal protein S12/S23
11114Bacterial regulatory helix-turn-helix proteins, AraC family
11111111111112Chaperonin 10 Kd subunit
11111413712111214101010135C2 domain
191814211118212011171220202PH domain
668556631147572bZIP transcription factor
188201412912111791410154Aldehyde dehydrogenase family
11463941004450885241525454806Fungal Zn(2)-Cys(6) binuclear cluster domain
181724161618181820181818219Cytochrome b5-like Heme/Steroid binding domain
32531232412230Oxidoreductase molybdopterin binding domain
87977776897890Oxidoreductase NAD-binding domain
211925202620152021172319246SNF2 family N-terminal domain
22432232222228Ribosomal protein S7p/S5e
181825171718181620181918222Ubiquitin-conjugating enzyme
75865555665669Isocitrate/isopropylmalate dehydrogenase
22122222222223Ribosomal Proteins L2, RNA binding domain
11111111111112Hsp90 protein
22322222222225Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111112Dihydrofolate reductase
11Chitin recognition protein
11331125118Cysteine-rich secretory protein family
11111111111112Ribosomal protein S3, C-terminal domain
31111212113Cupin
1111111111111Annexin
333333334333372-oxoacid dehydrogenases acyltransferase (catalytic domain)
53532242423237Catalase
11111111111112Disintegrin
142311921UDP-glucoronosyl and UDP-glucosyl transferase
65866556655568Aminotransferase class-III
22322222222225Ribosomal protein S19
11111111111112DNA gyrase B
23442122222228Thiamine pyrophosphate enzyme, central domain
43434333333339Lyase
22322222222225Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Sodium:neurotransmitter symporter family
11111111111112Adenylate and Guanylate cyclase catalytic domain
11211111111113ATP synthase delta (OSCP) subunit
1111111111111Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111111112Indole-3-glycerol phosphate synthase
1211221222117Aromatic amino acid lyase
11111111111112Pyruvate kinase, barrel domain
811989979109910108Kinesin motor domain
262632262626262427262425314DnaJ domain
141416141413141414141414169Proteasome subunit
6612112686838884Major intrinsic protein
11111111111112ATP synthase
22212141116Glycosyl hydrolase family 1
1111153'5'-cyclic nucleotide phosphodiesterase
1121111111112Profilin
22222211212221Ribosomal protein L22p/L17e
22422222222226Ribosomal protein L14p/L23e
10131191187121182911140Ubiquitin family
33444343444242Cofilin/tropomyosin-type actin-binding protein
1121111111111314-3-3 protein
54132242232434Alkaline phosphatase
111111118Zinc carboxypeptidase
24162723121317142592415219Aldo/keto reductase family
14138107131386978116Myb-like DNA-binding domain
43835333546350Forkhead domain
22322121121221Glycosyl hydrolases family 32 N-terminal domain
11212111212116Ribosomal protein L16p/L10e
22322222222225Ribosomal protein S14p/S29e
33333333333336FKBP-type peptidyl-prolyl cis-trans isomerase
21111111111113Glutathione peroxidase
2212121213
64443344355550Flavodoxin
11Protamine P1
11211111111113Calreticulin family
123Common central domain of tyrosinase
54746354557459Aminotransferase class-V
11211111111113Ribonucleotide reductase, small chain
414156384437364040394041493DEAD/DEAH box helicase
696785616967577066616369804Helicase conserved C-terminal domain
22Fructose-bisphosphate aldolase class-I
12111111111113EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
11212111212116Ribosomal protein L23
11111111111112Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111111111112Ribosomal protein L5
65555565555562Pyridoxal-dependent decarboxylase conserved domain
12213112423224Citrate synthase, C-terminal domain
55655555555561GHMP kinases N terminal domain
751297474968684Biotin carboxylase, N-terminal domain
11111111111112Tryptophan synthase alpha chain
989778871177795Pyridoxal-phosphate dependent enzyme
11121712111012912111112140NUDIX domain
43434344434444pfkB family carbohydrate kinase
4111133115Glycosyl hydrolases family 28
111115Luciferase-like monooxygenase
22322222222225Ribosomal protein L3
21222222221222Ribosomal protein L11, RNA binding domain
9910981010101010117113Histidine phosphatase superfamily (branch 1)
11111111111112Thymidylate synthase
11Lipoxygenase
44544444434448ATP synthase alpha/beta chain, C terminal domain
45434444445449Calponin homology (CH) domain
45443554353550Glutamine amidotransferases class-II
22222222222224Ribosomal protein S15
211133617Thaumatin family
11111111111112Fructose-1-6-bisphosphatase, N-terminal domain
11111111111112Ribonucleotide reductase, all-alpha domain
22222222222224Ribosomal protein S2
22211122231221SRF-type transcription factor (DNA-binding and dimerisation domain)
9913108101510117119122GATA zinc finger
1812101551216177141011147Amino acid permease
6588454478565111Prolyl oligopeptidase family
11222121212118Ribosomal protein L30p/L7e
1081188811610688102Histidine phosphatase superfamily (branch 2)
11111111111112Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44744444444451Aconitase family (aconitate hydratase)
224Glycosyl hydrolase family 10
1121111212114Glycosyl hydrolases family 17
22322222222225Ribosomal protein S5, N-terminal domain
22223222434129Nucleoside diphosphate kinase
12111213113Tetraspanin family
11222111222118Ribosomal protein S10p/S20e
152222121321Arrestin (or S-antigen), N-terminal domain
11111111111112Phosphoglucose isomerase
11211111111113SecY translocase
11111111111112Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222222224Ribosomal protein L6
33433333333337Polyprenyl synthetase
22222222222224Hexokinase
33655353534449Dynamin family
11121111111113Transcription factor TFIID (or TATA-binding protein, TBP)
43543344323442Rieske [2Fe-2S] domain
111115Phytochrome region
1225Proton-conducting membrane transporter
9714109696118118108Biotin-requiring enzyme
11111111111112Phosphofructokinase
11111111212114Ribosomal protein S17
11111111111112Hydroxymethylglutaryl-coenzyme A reductase
32433233333335FGGY family of carbohydrate kinases, N-terminal domain
11101711139101012111311138Enoyl-CoA hydratase/isomerase
22222222222224Ribosomal protein S9/S16
22332322233229Transcription factor TFIIB repeat
76775566775775Cytidine and deoxycytidylate deaminase zinc-binding region
11111111211113Molybdopterin oxidoreductase
67555746535765Chromo (CHRromatin Organisation MOdifier) domain
22222222222224Phosphatidylinositol-specific phospholipase C, Y domain
22323222323228Phosphatidylinositol-specific phospholipase C, X domain
64444243626348D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
21321112212119Malic enzyme, N-terminal domain
111111111111126-phosphogluconate dehydrogenase, C-terminal domain
94222352835348Multicopper oxidase
6101098977786895WW domain
22222122222223Ribosomal RNA adenine dimethylase
97971231049510010098105106106961,227WD domain, G-beta repeat
32833222222334Heavy-metal-associated domain
11Dockerin type I domain
33433333333337Adenylate kinase
22413321323228Phosphoglucomutase/phosphomannomutase, C-terminal domain
21312221212221Ribosomal protein S8
21222222222223Ribosomal protein S11
46955566566568LIM domain
11Matrixin
12323312433229Regulator of chromosome condensation (RCC1) repeat
22422222222226Ribosomal protein S13/S18
22222222222224chorismate binding enzyme
3332332333333460s Acidic ribosomal protein
44444444445449Prenyltransferase and squalene oxidase repeat
66754566454563Protein kinase C terminal domain
11111111111112Single-strand binding protein family
11Type II/IV secretion system protein
11111111121113S-adenosylmethionine synthetase, N-terminal domain
10914999891110119118Bromodomain
139141012810913111111131Acyl-CoA dehydrogenase, C-terminal domain
131219131614141414121512168Ubiquitin carboxyl-terminal hydrolase
11211111111113Ribosomal protein L36
2111111223217Ribonuclease T2 family
56556555666565HSF-type DNA-binding
22222222222224SRP54-type protein, GTPase domain
11111111111112Urease alpha-subunit, N-terminal domain
761085615877147100Serine carboxypeptidase
8812888888888100Phosphatidylinositol 3- and 4-kinase
22211111211116Transketolase, thiamine diphosphate binding domain
1135Glycosyl hydrolases family 11
22121112121117WHEP-TRS domain
33333233333234Inositol monophosphatase family
54954444444455Glutaredoxin
32342222222228Isocitrate lyase family
11111111111112Serine hydroxymethyltransferase
32432232212228Iron-containing alcohol dehydrogenase
21222222222223Ribosomal protein L10
54643352433244KOW motif
1111111111111Ribosomal protein L34
11Negative factor, (F-Protein) or Nef
11111117Ribosomal protein L33
32333122223228RF-1 domain
44444444645451Sodium:solute symporter family
11111111111112Imidazoleglycerol-phosphate dehydratase
11111111111112DNA polymerase family A
12111111111113IMP dehydrogenase / GMP reductase domain
11111111111112Glucose-6-phosphate dehydrogenase, NAD binding domain
55655555555561Protein phosphatase 2C
11411223121221Nucleotidyl transferase
33333121212226Carbonic anhydrase
11212111112115Phosphoribulokinase / Uridine kinase family
45444444445551Fatty acid desaturase
66866676666675MutS domain V
11311111111114Delta-aminolevulinic acid dehydratase
31422114511227Arginase family
66966666656674MCM P-loop domain
22323222314228Squalene/phytoene synthase
741257566758779FHA domain
312734222320252027222625302AMP-binding enzyme
34644444444449G-protein alpha subunit
77888877979792HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
8612136668849591His Kinase A (phospho-acceptor) domain
43233434432338Armadillo/beta-catenin-like repeat
192118241017191710221220209Tetratricopeptide repeat
32122313233126Ion transport protein
11111111111112DNA gyrase/topoisomerase IV, subunit A
11Binding-protein-dependent transport system inner membrane component
76777867697481BRCA1 C Terminus (BRCT) domain
54764465454660Glycosyl transferases group 1
53362233232438Glycosyl transferase family 2
1113SAM domain (Sterile alpha motif)
21331111112118linker histone H1 and H5 family
1111111111111Ribosomal protein L7/L12 C-terminal domain
44Pectate lyase
1221221212117ribonuclease
11111111111112Urease, gamma subunit
45674555543558CoA-ligase
151211695859767100Phosphopantetheine attachment site
34333333544543Formyl transferase
751066666869580Metallopeptidase family M24
1413112516151531414122Leucine Rich Repeat
40246284251923518615213alpha/beta hydrolase fold
33433333333337RNA polymerase Rpb2, domain 6
33623223332335PB1 domain
22222222222224Staphylococcal nuclease homologue
8918712686138138116Rab-GTPase-TBC domain
11111111111112Tudor domain
11111111111112WH1 domain
65673353433351Zinc finger, ZZ type
121121111112HRDC domain
7656566576