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PFAM Domains • Nakaseomyces bacillisporus CBS 7720
Annotations/GenomesAshgo1_1Kazaf1Klula1Nakbac1Nakdel1Pacta1_2Sacce1SacceM3707_1SacceM3836_1SacceM3837_1SacceM3838_1SacceM3839_1SacceYB210_1Torde1Zygro1TotalAnnotation Description
PFAMs
4,5395,0834,7745,7945,9285,2225,5355,3775,3675,3725,3865,3615,0874,7984,79978,422
353434353534333334333433323534508ATPase family associated with various cellular activities (AAA)
203023222528312928282829282126396ABC transporter
44444444544444461ATP synthase alpha/beta family, nucleotide-binding domain
131614151415161515161616141313221Elongation factor Tu GTP binding domain
788769777777668107Helix-loop-helix DNA-binding domain
62222222222212637Hsp20/alpha crystallin family
911991291414141414141499175Hsp70 protein
8986498888881088118KH domain
111111111111113SH2 domain
202120161820222323232323182021311SH3 domain
11101099109999998910140Actin
1519155414181514141514131516206Ankyrin repeat
777768777777877106ADP-ribosylation factor family
7856997888886410111Eukaryotic aspartyl protease
42422333333332343Cyclic nucleotide-binding domain
11Cytochrome b/b6/petB
11111122222221122Cytochrome c
25232222222223235Double-stranded RNA binding motif
13131112111010101010101112143EF hand
11111111111114Fe-4S binding domain
122111210Fibronectin type III domain
12222322222232231Globin
34433566666655573Glutathione S-transferase, C-terminal domain
13312233333341136Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
64545588888746591Homeodomain
11Laminin EGF domain
33333333333336348lactate/malate dehydrogenase, NAD binding domain
34355354444463360Myosin head (motor domain)
33533533333323348Cytochrome P450
91112881111099611411411411411411611089891,581Protein kinase domain
666577988888868108Pyridine nucleotide-disulphide oxidoreductase
202321252324242424242424222020342Ras family
44334744444444461Response regulator receiver domain
11111111111111115RNase H
424741343949484747474747424242661RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11111117Retroviral aspartyl protease
111115Reverse transcriptase (RNA-dependent DNA polymerase)
21111211111112320Copper/zinc superoxide dismutase (SODC)
1111111111111114Iron/manganese superoxide dismutases, alpha-hairpin domain
34346544444454462Subtilase family
132222181625343333333535282616389Sugar (and other) transporter
88811107101010101010876133Thioredoxin
11111111111112Trypsin
34333544444443355Tubulin/FtsZ family, GTPase domain
334429131833383737383738362523479Zinc finger, C2H2 type
2525265331222222222222202825320Zinc finger, C3HC4 type (RING finger)
35433465333223554Zinc knuckle
33233333333333344Protein-tyrosine phosphatase
112Somatotropin hormone family
161418131326131313131313122119230short chain dehydrogenase
8211510819171515151515161111211Zinc-binding dehydrogenase
22222322222222231Thiolase, N-terminal domain
22222222222213230Beta-ketoacyl synthase, N-terminal domain
222113222222222292Fe-2S iron-sulfur cluster binding domain
12112354434311136Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
777788999999987122Glutamine amidotransferase class-I
10111011111010101010101091010152TCP-1/cpn60 chaperonin family
11ATP synthase A chain
1111111111111114Glutamine synthetase, catalytic domain
11111111111111115Triosephosphate isomerase
8910141471210101010101099152E1-E2 ATPase
101210121211101010101010101010157Core histone H2A/H2B/H3/H4
11311187657964161Alpha amylase, catalytic domain
11111111111111115Phorbol esters/diacylglycerol binding domain (C1 domain)
43534343444434355Bacterial transferase hexapeptide (six repeats)
34355433333333351tRNA synthetases class I (I, L, M and V)
91612121511131313131313131111188Cyclin, N-terminal domain
11Carboxylesterase family
44444444444444460DNA polymerase family B
34343433333333348ATP synthase subunit C
1111211111112116Peroxidase
11NADH dehydrogenase
181717171818212020202120211918285Calcineurin-like phosphoesterase
22153244444431346Cellulase (glycosyl hydrolase family 5)
66666666666666690tRNA synthetases class II (D, K and N)
273229303033343434343434333433485Mitochondrial carrier protein
111311131112111111111111101011168Aminotransferase class I and II
79865101111111111111089138Phosphoribosyl transferase domain
6867611888888666110Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
12111111111111116Phosphoglycerate kinase
23233233333332240Ribosomal protein S4/S9 N-terminal domain
23232233333332239Ribosomal protein S12/S23
11Bacterial regulatory helix-turn-helix proteins, AraC family
11111111111111115Chaperonin 10 Kd subunit
910867911111111111110910144C2 domain
181814151517242222222222211413279PH domain
5979107888888854112bZIP transcription factor
68109910989899898129Aldehyde dehydrogenase family
424657403759535453555654464148741Fungal Zn(2)-Cys(6) binuclear cluster domain
10811761677777751111127Cytochrome b5-like Heme/Steroid binding domain
11Oxidoreductase molybdopterin binding domain
697778888888877114Oxidoreductase NAD-binding domain
171817171718171717171717171717257SNF2 family N-terminal domain
22222222222222230Ribosomal protein S7p/S5e
121312141215141414141414141313202Ubiquitin-conjugating enzyme
676776777777766100Isocitrate/isopropylmalate dehydrogenase
23232233333332239Ribosomal Proteins L2, RNA binding domain
11111122222231123Hsp90 protein
22222222222222230Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111111115Dihydrofolate reductase
3332123323222233Cysteine-rich secretory protein family
11111111111111115Ribosomal protein S3, C-terminal domain
11Trypsin and protease inhibitor
222222222222222302-oxoacid dehydrogenases acyltransferase (catalytic domain)
11221222222223531Catalase
1113UDP-glucoronosyl and UDP-glucosyl transferase
33643445556667976Aminotransferase class-III
22222222222222230Ribosomal protein S19
11111111111111115DNA gyrase B
66467477777767593Thiamine pyrophosphate enzyme, central domain
33333433333333346Lyase
12222233333332236Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111111111111114Adenylate and Guanylate cyclase catalytic domain
11111111111111115ATP synthase delta (OSCP) subunit
11111111111111115Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111111111114Indole-3-glycerol phosphate synthase
11122122222221124Pyruvate kinase, barrel domain
66555865555556784Kinesin motor domain
212021222224212121212121202121318DnaJ domain
141414141414141414141414141414210Proteasome subunit
24234344444443150Major intrinsic protein
11111111111111115ATP synthase
111111111111111153'5'-cyclic nucleotide phosphodiesterase
11111111111111115Profilin
21222122222232128Ribosomal protein L22p/L17e
22222233333322236Ribosomal protein L14p/L23e
8108877988888998123Ubiquitin family
33343433333333448Cofilin/tropomyosin-type actin-binding protein
1212212222222112514-3-3 protein
11111111111111115Alkaline phosphatase
11111111111121116Zinc carboxypeptidase
513981013161616161616161012192Aldo/keto reductase family
1314137914151515151515151213200Myb-like DNA-binding domain
35344244444433354Forkhead domain
11111111122114Glycosyl hydrolases family 32 N-terminal domain
11122111111111117Ribosomal protein L16p/L10e
23222233333332238Ribosomal protein S14p/S29e
23334344444443352FKBP-type peptidyl-prolyl cis-trans isomerase
13243233333332240Glutathione peroxidase
222122222222225
410554876667766794Flavodoxin
11111111111112Calreticulin family
33433433333333549Aminotransferase class-V
12122122222211124Ribonucleotide reductase, small chain
333633393932563635353637293534545DEAD/DEAH box helicase
586359605956795957575859526259897Helicase conserved C-terminal domain
11111111111111115EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222222232231Ribosomal protein L23
11111111111111115Pyridoxal-dependent decarboxylase, C-terminal sheet domain
22222233333332237Ribosomal protein L5
2222322222222229Pyridoxal-dependent decarboxylase conserved domain
23223133333332238Citrate synthase, C-terminal domain
46544566666666581GHMP kinases N terminal domain
55556677777765590Biotin carboxylase, N-terminal domain
11111111111111115Tryptophan synthase alpha chain
788766789888878113Pyridoxal-phosphate dependent enzyme
677678777777777104NUDIX domain
22433344444433350pfkB family carbohydrate kinase
111111118Glycosyl hydrolases family 28
22222222222222230Ribosomal protein L3
23222233333332238Ribosomal protein L11, RNA binding domain
9121012131212121212121211109170Histidine phosphatase superfamily (branch 1)
11111111111111115Thymidylate synthase
44444444544444461ATP synthase alpha/beta chain, C terminal domain
44424544444444459Calponin homology (CH) domain
53433477777765580Glutamine amidotransferases class-II
22222522222222233Ribosomal protein S15
11122111111111117Fructose-1-6-bisphosphatase, N-terminal domain
23211222222222229Ribonucleotide reductase, all-alpha domain
23222233333332238Ribosomal protein S2
25235244444443353SRF-type transcription factor (DNA-binding and dimerisation domain)
696878101010101010966125GATA zinc finger
202125161622242323242324242220327Amino acid permease
22222222222222230Prolyl oligopeptidase family
33233344444433350Ribosomal protein L30p/L7e
11621465556563157Histidine phosphatase superfamily (branch 2)
11Respiratory-chain NADH dehydrogenase, 30 Kd subunit
45444444444444461Aconitase family (aconitate hydratase)
23433433333333346Glycosyl hydrolases family 17
22222222222222230Ribosomal protein S5, N-terminal domain
11111111111111115Nucleoside diphosphate kinase
22222222222222230Ribosomal protein S10p/S20e
24265433333331247Arrestin (or S-antigen), N-terminal domain
11111111111111115Phosphoglucose isomerase
11111111111111115Carbohydrate phosphorylase
11122222222222126SecY translocase
11Respiratory-chain NADH dehydrogenase, 49 Kd subunit
23323333333333343Ribosomal protein L6
33333333333333345Polyprenyl synthetase
24234455555532357Hexokinase
33344333333333347Dynamin family
11111111111111115Transcription factor TFIID (or TATA-binding protein, TBP)
11111311111111117Rieske [2Fe-2S] domain
33Proton-conducting membrane transporter
666677888888866106Biotin-requiring enzyme
23223222222222232Phosphofructokinase
22222233333332237Ribosomal protein S17
12111222222221124Hydroxymethylglutaryl-coenzyme A reductase
33333433333323446FGGY family of carbohydrate kinases, N-terminal domain
23232233333333341Enoyl-CoA hydratase/isomerase
23222233333332238Ribosomal protein S9/S16
22222233333312336Transcription factor TFIIB repeat
66666766666656690Cytidine and deoxycytidylate deaminase zinc-binding region
11Molybdopterin oxidoreductase
22222222222222230Chromo (CHRromatin Organisation MOdifier) domain
11111111111111115Phosphatidylinositol-specific phospholipase C, Y domain
11111111111111115Phosphatidylinositol-specific phospholipase C, X domain
23223545444444656D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
11111211111111116Malic enzyme, N-terminal domain
121211222222211246-phosphogluconate dehydrogenase, C-terminal domain
32333333333334446Multicopper oxidase
55445555555545572WW domain
22222222222222230Ribosomal RNA adenine dimethylase
385292101010111010744105Yeast PIR protein repeat
7982748383908887868686878079781,248WD domain, G-beta repeat
32433433333333447Heavy-metal-associated domain
33333333333333345Adenylate kinase
31234233333334242Phosphoglucomutase/phosphomannomutase, C-terminal domain
22333322222213234Ribosomal protein S8
11123122222221125Ribosomal protein S11
35353344444443356LIM domain
1112311111111218Regulator of chromosome condensation (RCC1) repeat
23222233333332238Ribosomal protein S13/S18
112
22222222222222230chorismate binding enzyme
5655455555554557460s Acidic ribosomal protein
44433444444444458Prenyltransferase and squalene oxidase repeat
566466888888866101Protein kinase C terminal domain
11111111111111115Single-strand binding protein family
1112222222221123S-adenosylmethionine synthetase, N-terminal domain
898899101010101010988136Bromodomain
112Acyl-CoA dehydrogenase, C-terminal domain
131612141615161616161616171413226Ubiquitin carboxyl-terminal hydrolase
1111111111111114Ribosomal protein L36
11111111111111216Ribonuclease T2 family
43444455555554466HSF-type DNA-binding
22222222222222230SRP54-type protein, GTPase domain
32432433333332344Serine carboxypeptidase
888888999999988127Phosphatidylinositol 3- and 4-kinase
12111122222221123Transketolase, thiamine diphosphate binding domain
13133133333332338Inositol monophosphatase family
45446476666686482Glutaredoxin
22222122222222229Isocitrate lyase family
23232222222222232Serine hydroxymethyltransferase
111111118Iron-containing alcohol dehydrogenase
22233222222212231Ribosomal protein L10
46421378788753477KOW motif
11111111111111115Ribosomal protein L34
22233222222212231RF-1 domain
241181111112125Sodium:solute symporter family
11111111111111115Imidazoleglycerol-phosphate dehydratase
1111111111111114DNA polymerase family A
11122152233241131IMP dehydrogenase / GMP reductase domain
12111111111111116Glucose-6-phosphate dehydrogenase, NAD binding domain
676776777777766100Protein phosphatase 2C
21223122222222128Nucleotidyl transferase
1111111111111114Carbonic anhydrase
11123122222221125Phosphoribulokinase / Uridine kinase family
5161161111113433Fatty acid desaturase
46666666666656687MutS domain V
11111111111111115Delta-aminolevulinic acid dehydratase
21311411111123326Arginase family
666