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PFAM Domains • Loramyces macrosporus CBS235.53 v1.0
Annotations/GenomesAcema1Cadsp1Leptod1Lorju1Lorma1Marbr1Phisc1TotalAnnotation Description
PFAMs
11,88314,03217,3319,64912,0507,17512,05684,176
111147 transmembrane receptor (rhodopsin family)
3257 transmembrane receptor (Secretin family)
82677260673863449ATPase family associated with various cellular activities (AAA)
51828757533361424ABC transporter
444444428ATP synthase alpha/beta family, nucleotide-binding domain
14161715161415107Elongation factor Tu GTP binding domain
20181913141017111Helix-loop-helix DNA-binding domain
798553441Hsp20/alpha crystallin family
12122591181087Hsp70 protein
9138118111272KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
1113SH2 domain
25271623132225151SH3 domain
1010111011101072Actin
197194651033227135753Ankyrin repeat
563141626PAN domain
779777852ADP-ribosylation factor family
26263229331033189Eukaryotic aspartyl protease
455444430Cyclic nucleotide-binding domain
11Beta/Gamma crystallin
11111128Cytochrome c
222312315Double-stranded RNA binding motif
222441921919109EF hand
1112164Fe-4S binding domain
28312420Fibronectin type III domain
11Globin
19262822151125146Glutathione S-transferase, C-terminal domain
113111210Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
9137747956Homeodomain
444332424lactate/malate dehydrogenase, NAD binding domain
555655536Myosin head (motor domain)
182214215155139462261,177Cytochrome P450
1851902871301831041521,231Protein kinase domain
29382919141430173Pyridine nucleotide-disulphide oxidoreductase
29343126262326195Ras family
29292730291831193Response regulator receiver domain
61510336851RNase H
63695563526365430RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1717Reverse transcriptase (RNA-dependent DNA polymerase)
223242217Copper/zinc superoxide dismutase (SODC)
222222214Iron/manganese superoxide dismutases, alpha-hairpin domain
2536561327818183Subtilase family
131206214809346136906Sugar (and other) transporter
17131413161217102Thioredoxin
132323317Trypsin
444444428Tubulin/FtsZ family, GTPase domain
951522529von Willebrand factor type A domain
13714851713055110602Zinc finger, C2H2 type
606545194259290Zinc finger, C3HC4 type (RING finger)
6856412748Zinc knuckle
223222215Protein-tyrosine phosphatase
189303284133130672161,322short chain dehydrogenase
97144124715636119647Zinc-binding dehydrogenase
7810776752Thiolase, N-terminal domain
27253228271033182Beta-ketoacyl synthase, N-terminal domain
7855448412Fe-2S iron-sulfur cluster binding domain
211221211Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
1110119881067Glutamine amidotransferase class-I
1011101010101071TCP-1/cpn60 chaperonin family
474334631Glutamine synthetase, catalytic domain
222222214Triosephosphate isomerase
19232719251514142E1-E2 ATPase
910108916870Core histone H2A/H2B/H3/H4
12115Copper binding proteins, plastocyanin/azurin family
10710875855Alpha amylase, catalytic domain
222122213Phorbol esters/diacylglycerol binding domain (C1 domain)
8710778956Bacterial transferase hexapeptide (six repeats)
338353429tRNA synthetases class I (I, L, M and V)
7119797858Cyclin, N-terminal domain
65835929292164350Carboxylesterase family
444344427DNA polymerase family B
666665641ATP synthase subunit C
5914675854Peroxidase
1333291711228133Beta-lactamase
555344632C-5 cytosine-specific DNA methylase
37292931312136214Calcineurin-like phosphoesterase
22262920231123154Cellulase (glycosyl hydrolase family 5)
789777752tRNA synthetases class II (D, K and N)
41474740393642292Mitochondrial carrier protein
1113recA bacterial DNA recombination protein
23262219181223143Aminotransferase class I and II
111099581062Phosphoribosyl transferase domain
1010101010101070Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111128Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
11114Bacterial regulatory helix-turn-helix proteins, AraC family
11111117Chaperonin 10 Kd subunit
1219131110151393C2 domain
18191119101920116PH domain
1212281117914103bZIP transcription factor
26364221261523189Aldehyde dehydrogenase family
343483431250223924202,242Fungal Zn(2)-Cys(6) binuclear cluster domain
29333026241930191Cytochrome b5-like Heme/Steroid binding domain
664432530Oxidoreductase molybdopterin binding domain
18252415141121128Oxidoreductase NAD-binding domain
36334031312432227SNF2 family N-terminal domain
212222213Ribosomal protein S7p/S5e
26242620212126164Ubiquitin-conjugating enzyme
8108777754Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
11111117Hsp90 protein
222222214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111128Dihydrofolate reductase
1310912551266Chitin recognition protein
568433534Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
10139122845Cupin
211212211Annexin
345113219Eukaryotic-type carbonic anhydrase
12211119Chalcone and stilbene synthases, N-terminal domain
3344333232-oxoacid dehydrogenases acyltransferase (catalytic domain)
1088452845Catalase
122112110Disintegrin
6414481744UDP-glucoronosyl and UDP-glucosyl transferase
1317138781480Aminotransferase class-III
222222214Ribosomal protein S19
11111117DNA gyrase B
91297671262Thiamine pyrophosphate enzyme, central domain
545443429Lyase
222222214Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
123Sodium:neurotransmitter symporter family
12111129Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
221111311Orotidine 5'-phosphate decarboxylase / HUMPS family
11211118Indole-3-glycerol phosphate synthase
12333113Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
1012111111101176Kinesin motor domain
40373836372937254DnaJ domain
1414141414141498Proteasome subunit
131413101081280Major intrinsic protein
11111117ATP synthase
689423537Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
11111117Profilin
11212119Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
19211613131418114Ubiquitin family
555555535Cofilin/tropomyosin-type actin-binding protein
22333221714-3-3 protein
563524328Alkaline phosphatase
144224118Zinc carboxypeptidase
51816838342159352Aldo/keto reductase family
14165165131988Myb-like DNA-binding domain
444344427Forkhead domain
266431325Glycosyl hydrolases family 32 N-terminal domain
11212119Ribosomal protein L16p/L10e
222222214Ribosomal protein S14p/S29e
354343325FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
2222210
112Dehydrin
91211996965Flavodoxin
11111117Calreticulin family
21182214131217117Common central domain of tyrosinase
111110101191173Aminotransferase class-V
11111117Ribonucleotide reductase, small chain
40474641464143304DEAD/DEAH box helicase
86889380847885594Helicase conserved C-terminal domain
11111117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
222222214Ribosomal protein L5
788774849Pyridoxal-dependent decarboxylase conserved domain
254232220Citrate synthase, C-terminal domain
556655537GHMP kinases N terminal domain
688885750Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
1315151110101690Pyridoxal-phosphate dependent enzyme
16262418151518132NUDIX domain
554554937pfkB family carbohydrate kinase
21202499524112Glycosyl hydrolases family 28
428141525Luciferase-like monooxygenase
222222214Ribosomal protein L3
222222214Ribosomal protein L11, RNA binding domain
21222616151521136Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
121111310Lipoxygenase
444444428ATP synthase alpha/beta chain, C terminal domain
555655536Calponin homology (CH) domain
564634533Glutamine amidotransferases class-II
222222214Ribosomal protein S15
212221212Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222222214Ribosomal protein S2
6115372236SRF-type transcription factor (DNA-binding and dimerisation domain)
889876955GATA zinc finger
76703450223181364Amino acid permease
458322529Prolyl oligopeptidase family
222221213Ribosomal protein L30p/L7e
12129111181578Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
575444534Aconitase family (aconitate hydratase)
787664745Glycosyl hydrolase family 10
645424732Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
12111118Nucleoside diphosphate kinase
112Tetraspanin family
222221213Ribosomal protein S10p/S20e
554544431Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11111117SecY translocase
12111129Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
334344425Polyprenyl synthetase
444443427Hexokinase
11132112215992Dynamin family
11111117Transcription factor TFIID (or TATA-binding protein, TBP)
566542634Rieske [2Fe-2S] domain
134371221Phytochrome region
911111097966Biotin-requiring enzyme
11111117Phosphofructokinase
222222113Ribosomal protein S17
123122213Hydroxymethylglutaryl-coenzyme A reductase
444444529FGGY family of carbohydrate kinases, N-terminal domain
1113Sodium:dicarboxylate symporter family
1524321415815123Enoyl-CoA hydratase/isomerase
222222214Ribosomal protein S9/S16
222222214Transcription factor TFIIB repeat
1112109881068Cytidine and deoxycytidylate deaminase zinc-binding region
211221110Molybdopterin oxidoreductase
12121561471177Chromo (CHRromatin Organisation MOdifier) domain
333223218Phosphatidylinositol-specific phospholipase C, Y domain
535363429Phosphatidylinositol-specific phospholipase C, X domain
1216128861274D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
333332320Malic enzyme, N-terminal domain
2322212146-phosphogluconate dehydrogenase, C-terminal domain
2727212522833163Multicopper oxidase
1812910981379WW domain
11112118Ribosomal RNA adenine dimethylase
111212210Yeast PIR protein repeat
125163133126108101119875WD domain, G-beta repeat
684555538Heavy-metal-associated domain
456455635Adenylate kinase
323223318Phosphoglucomutase/phosphomannomutase, C-terminal domain
222222214Ribosomal protein S8
11211118Ribosomal protein S11
444544429LIM domain
33Matrixin
232332318Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
11
223332520chorismate binding enzyme
44333332360s Acidic ribosomal protein
544554532Prenyltransferase and squalene oxidase repeat
683436737Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
101010888963Bromodomain
1721231516815115Acyl-CoA dehydrogenase, C-terminal domain
15151615141515105Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
444543428Ribonuclease T2 family
333323320HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
151916101151995Serine carboxypeptidase
11Scorpion short toxin, BmKK2
888888856Phosphatidylinositol 3- and 4-kinase
365331324Transketolase, thiamine diphosphate binding domain
645772738Glycosyl hydrolases family 11
433443425Inositol monophosphatase family
444444428Glutaredoxin
892532635Isocitrate lyase family
242322217Serine hydroxymethyltransferase
737343734Iron-containing alcohol dehydrogenase
222222214Ribosomal protein L10
322213316KOW motif
11111117Ribosomal protein L34
11Ribosomal protein L33
223232216RF-1 domain
565222830Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
576556640Protein phosphatase 2C
224232217Nucleotidyl transferase
67105621046Carbonic anhydrase
114121111Phosphoribulokinase / Uridine kinase family
1112101097867Fatty acid desaturase
666666642MutS domain V
11111117Delta-aminolevulinic acid dehydratase
565443431Arginase family
666676643MCM P-loop domain
323342219Squalene/phytoene synthase
112Bacterial extracellular solute-binding proteins, family 5 Middle
11Bacterial extracellular solute-binding proteins, family 3
88119910964FHA domain
55737968632563426AMP-binding enzyme
333443424G-protein alpha subunit
91158771158HMG (high mobility group) box
23262325211527160His Kinase A (phospho-acceptor) domain
332323319Armadillo/beta-catenin-like repeat
41442032122335207Tetratricopeptide repeat
633332222Ion transport protein
11111117DNA gyrase/topoisomerase IV, subunit A
14129127111075BRCA1 C Terminus (BRCT) domain
1010117791165Glycosyl transferases group 1
692523936Glycosyl transferase family 2
295343430SAM domain (Sterile alpha motif)
11111117linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
41616339152Pectate lyase
11311119ribonuclease
11111117Urease, gamma subunit
444444428CoA-ligase
20224326341030185Phosphopantetheine attachment site
333343322Formyl transferase
9111291171069Metallopeptidase family M24
20173155131487Leucine Rich Repeat
65911848113092355alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
434344426PB1 domain
232222215Staphylococcal nuclease homologue
111112101291176Rab-GTPase-TBC domain
11111117Tudor domain
11111117WH1 domain
544554633Zinc finger, ZZ type
11111117HRDC domain
1111896101166CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
333334322S1 RNA binding domain
11111117HIUase/Transthyretin family
744673839AhpC/TSA family
544445632tRNA synthetases class I (W and Y)
221112211UvrD/REP helicase N-terminal domain
779586749Rhodanese-like domain
222213214Universal stress protein family
67764657392871384Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
232222215AIR synthase related protein, N-terminal domain
887879855tRNA synthetase class II core domain (G, H, P, S and T)
11111117SpoU rRNA Methylase family
222222214Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
11Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain
121116PDZ domain
1114125541061Class II Aldolase and Adducin N-terminal domain
445444227Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
555555535Fes/CIP4, and EFC/F-BAR homology domain
564735535IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
474634533Phospholipase D Active site motif
229271225Regulator of G protein signaling domain
444444428GTPase-activator protein for Ras-like GTPase
476444433RasGEF domain
466444432RasGEF N-terminal motif
999888960RhoGAP domain
667666643RhoGEF domain
334343424SPRY domain
333333321RNA polymerase Rpb1, domain 2
222222214Guanylate kinase
555555434Gelsolin repeat
555656739UBA/TS-N domain
22231519151420128PHD-finger
11111117GGL domain
666666642HECT-domain (ubiquitin-transferase)
221212212Helix-hairpin-helix motif
122112110MSP (Major sperm protein) domain
566335432Ribonuclease III domain
224342219Region in Clathrin and VPS
333323219RanBP1 domain
222212213PPIC-type PPIASE domain
344443426Zn-finger in Ran binding protein and others
1818717101419103Zinc finger C-x8-C-x5-C-x3-H type (and similar)
522252523Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
90932365193997426F-box domain
11111117Elongation factor 1 gamma, conserved domain
555332528Calpain family cysteine protease
332543222Copper fist DNA binding domain
566555638CRAL/TRIO domain
43475912411831251BTB/POZ domain
233441522Ricin-type beta-trefoil lectin domain
12111118Inhibitor of Apoptosis domain
445333426Voltage gated chloride channel
748452535Caspase domain
13311513111212107GDSL-like Lipase/Acylhydrolase
11111117Poly-adenylate binding protein, unique domain
11111117POLO box duplicated region
25404127281531207ABC transporter transmembrane region
1111Integrase core domain
912136751062FAD binding domain
101117141231279Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11211129HAMP domain
222222214ribosomal L5P family C-terminus
766664742Insulinase (Peptidase family M16)
334333322Dehydrogenase E1 component
11111117Lumazine binding domain
666666642Elongation factor G C-terminus
455554432HMGL-like
444444428DnaJ central domain
422442321Starch binding domain
223232216Ribosomal protein L1p/L10e family
1012129117768Cation transporting ATPase, C-terminus
11141313138981Cation transporter/ATPase, N-terminus
12211119dUTPase
575444534Aconitase C-terminal domain
434333424Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
23263027261035177Acyl transferase domain
11111117Urease beta subunit
9910673953Dihydrodipicolinate synthetase family
43482135213337238haloacid dehalogenase-like hydrolase
61110432642Glycosyl hydrolases family 2
1926332222717146Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
112Translation initiation factor IF-3, C-terminal domain
1111116Acylphosphatase
411111110Adenylosuccinate synthetase
243221216Asparaginase, N-terminal
312332317Peptidase S24-like
11111117Inorganic pyrophosphatase
1216301117612104Glycosyl hydrolases family 16
333333321Glycosyl hydrolases family 15
13172281031386NADH:flavin oxidoreductase / NADH oxidase family
2542215213-hydroxyacyl-CoA dehydrogenase, C-terminal domain
333332320Glycosyl hydrolase family 20, catalytic domain
433553326HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
42454825261940245GMC oxidoreductase
242332218Asparagine synthase
18283019231219149Fungal cellulose binding domain
677567644Septin
11111117EF-1 guanine nucleotide exchange domain
21211119Homoserine dehydrogenase
6101414742Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
343333423tRNA synthetases class I (E and Q), catalytic domain
146221117tRNA synthetases class I (R)
444444428XPG N-terminal domain
1527261512718120Metallo-beta-lactamase superfamily
325F5/8 type C domain
322332318Choline/Carnitine o-acyltransferase
132221213Putative esterase
11111117Ferrochelatase
223222215Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
21111118Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333333321RNB domain
1215186661477Dioxygenase
333333321CNH domain
233222216Diacylglycerol kinase catalytic domain
119108961164Dual specificity phosphatase, catalytic domain
223222215P21-Rho-binding domain
1212131213111285PX domain
553434428Ras association (RalGDS/AF-6) domain
655665639UBX domain
444454429VHS domain
11111117Phosphoinositide 3-kinase C2
222222214DAHP synthetase I family
1221198891390Carbon-nitrogen hydrolase
344222421N-acetyltransferase
11111117Prephenate dehydratase
333433423Syntaxin
564545534Pumilio-family RNA binding repeat
667776746Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
222222214ER lumen protein retaining receptor
222222214tRNA N6-adenosine threonylcarbamoyltransferase
222111211Histidinol dehydrogenase
455444430impB/mucB/samB family
111115
11111117Ribosomal L15
113131111Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11Stathmin family
11111117Translationally controlled tumour protein
788673746Glycosyl hydrolase family 7
415Ring hydroxylating alpha subunit (catalytic domain)
11111117RNA pseudouridylate synthase
444444428Histone deacetylase domain
667763641POT family
11211118PWWP domain
3236