PFAM Domains • Saccharomyces cerevisiae M3838 v1.0
Annotations/GenomesAscru1Canar1Canca1Canta1Cante1Dekbr2Hanpo2Hypbu1Lipst1_1Metbi1Nadfu1Pacta1_2Picme2Picst3Sacce1SacceM3838_1Spapa3Wican1TotalAnnotation Description
PFAMs
5,3295,1224,4745,1425,0504,9105,0065,3496,3674,8895,3245,2224,8884,5715,5355,3865,2595,80793,630
313330333432323335343734322833343333591ATPase family associated with various cellular activities (AAA)
302825252424222956222628303131283136526ABC transporter
44444444444444444472ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
171412141314141414141415141416161414257Elongation factor Tu GTP binding domain
13107981089978910777810156Helix-loop-helix DNA-binding domain
4121244222226Hsp20/alpha crystallin family
109799999791099121414910174Hsp70 protein
885677879799888888138KH domain
1111111111111114SH2 domain
221816231917172321232120182222231921365SH3 domain
101081191010101011111098991011176Actin
121510151315121716131514131418151616259Ankyrin repeat
767666677678577776118ADP-ribosylation factor family
11941285510896989781412154Eukaryotic aspartyl protease
23443433444344333361Cyclic nucleotide-binding domain
112Cytochrome b/b6/petB
21111211112111221123Cytochrome c
53121122312221223540Double-stranded RNA binding motif
20111410911141315101512101311101111220EF hand
1111131111111111184Fe-4S binding domain
1121121211Fibronectin type III domain
7221312212322228244Globin
95246665734582666898Glutathione S-transferase, C-terminal domain
21112212112214331232Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
53243354636543885481Homeodomain
43233333232333333352lactate/malate dehydrogenase, NAD binding domain
3232231525323543149Myosin head (motor domain)
465911459216455103395124Cytochrome P450
10210179958994979586959896969511411493971,736Protein kinase domain
77557510710797789859132Pyridine nucleotide-disulphide oxidoreductase
352119202018222023212424192324242021398Ras family
464763577797564489108Response regulator receiver domain
14113211111111121RNase H
515240454053524762415849464748474659883RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Retroviral aspartyl protease
123Reverse transcriptase (RNA-dependent DNA polymerase)
23133222121223113236Copper/zinc superoxide dismutase (SODC)
11121112111112112223Iron/manganese superoxide dismutases, alpha-hairpin domain
1046444465455444412594Subtilase family
830102439283232103201425146034352539572Sugar (and other) transporter
987989888997791010810153Thioredoxin
3111112111111218Trypsin
43533333534533443364Tubulin/FtsZ family, GTPase domain
112von Willebrand factor type A domain
374130383833343841364133334938373339669Zinc finger, C2H2 type
302630312828263534283131302422223337526Zinc finger, C3HC4 type (RING finger)
48342822923435637479Zinc knuckle
62234223232322334351Protein-tyrosine phosphatase
161720224215253180172026173113133340478short chain dehydrogenase
211623171716192340201519162417151829365Zinc-binding dehydrogenase
33322222523324224551Thiolase, N-terminal domain
22222222522222222239Beta-ketoacyl synthase, N-terminal domain
333333333333332233522Fe-2S iron-sulfur cluster binding domain
21111113111311541231Enolase, C-terminal TIM barrel domain
3216Cytochrome C and Quinol oxidase polypeptide I
1113Cytochrome C oxidase subunit II, periplasmic domain
877777778788879987136Glutamine amidotransferase class-I
11109910910119101010101010101011179TCP-1/cpn60 chaperonin family
11ATP synthase A chain
11211111112111111120Glutamine synthetase, catalytic domain
11111111311111111120Triosephosphate isomerase
129810109810171011791112101013186E1-E2 ATPase
14105111110911791311101110101110183Core histone H2A/H2B/H3/H4
111336231924116873475Alpha amylase, catalytic domain
21211111211131111123Phorbol esters/diacylglycerol binding domain (C1 domain)
55455565646355448792Bacterial transferase hexapeptide (six repeats)
43433243334437333362tRNA synthetases class I (I, L, M and V)
111061110101011711101171113131211185Cyclin, N-terminal domain
111732419Carboxylesterase family
44444444444444444472DNA polymerase family B
33333333433433333356ATP synthase subunit C
2211122222222112128Peroxidase
1131121121115Beta-lactamase
1113NADH dehydrogenase
192115181920211829181818201821211821353Calcineurin-like phosphoesterase
32135113333214443349Cellulase (glycosyl hydrolase family 5)
666666666666566666107tRNA synthetases class II (D, K and N)
343233343331313335333833303434343335600Mitochondrial carrier protein
151311141512111411131112101011111314221Aminotransferase class I and II
10868888888101088111188154Phosphoribosyl transferase domain
6849610899812116888811149Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111111111111118Phosphoglycerate kinase
22122222223222332238Ribosomal protein S4/S9 N-terminal domain
22222222223222332239Ribosomal protein S12/S23
112217Bacterial regulatory helix-turn-helix proteins, AraC family
12111121112111111121Chaperonin 10 Kd subunit
109610107111081099691111911166C2 domain
121314141312131714131517121524221218270PH domain
663663647587558854102bZIP transcription factor
101010910101111119910101099915182Aldehyde dehydrogenase family
61704366866273771255539598085535659931,242Fungal Zn(2)-Cys(6) binuclear cluster domain
1713121416151414191413161214771313243Cytochrome b5-like Heme/Steroid binding domain
12115Oxidoreductase molybdopterin binding domain
577769988678878879134Oxidoreductase NAD-binding domain
191817181819161819181818191817171719323SNF2 family N-terminal domain
22222322223222222238Ribosomal protein S7p/S5e
131415131314141321131515141314141316257Ubiquitin-conjugating enzyme
965666666666667766112Isocitrate/isopropylmalate dehydrogenase
23233223233233333247Ribosomal Proteins L2, RNA binding domain
11111111112111221121Hsp90 protein
22222223222222222237Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111111111118Dihydrofolate reductase
1214Chitin recognition protein
4244422423223329355Cysteine-rich secretory protein family
11111111111111111118Ribosomal protein S3, C-terminal domain
11Cupin
112Annexin
112Trypsin and protease inhibitor
223222222232222222382-oxoacid dehydrogenases acyltransferase (catalytic domain)
11222112612211221232Catalase
112Disintegrin
11114UDP-glucoronosyl and UDP-glucosyl transferase
6103475884584974658111Aminotransferase class-III
22222212213222222235Ribosomal protein S19
11111111111111111118DNA gyrase B
26543453524443773475Thiamine pyrophosphate enzyme, central domain
44343334333434334361Lyase
22222222222222332238Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
21211111112111111121Adenylate and Guanylate cyclase catalytic domain
11111111112111111119ATP synthase delta (OSCP) subunit
11111111111111111118Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111111111111118Indole-3-glycerol phosphate synthase
11Neurohypophysial hormones, N-terminal Domain
21111111112111221122Pyruvate kinase, barrel domain
7986648766108466568120Kinesin motor domain
242421232123232324242524232421212325416DnaJ domain
141414141414131414131414141414141414250Proteasome subunit
2111111121311441228Major intrinsic protein
11111111111111111118ATP synthase
112Glycosyl hydrolase family 1
111111111111111111183'5'-cyclic nucleotide phosphodiesterase
1111111111111111117Profilin
21122121112111221125Ribosomal protein L22p/L17e
22112222222222332236Ribosomal protein L14p/L23e
96877777117117769878139Ubiquitin family
43244444442443334565Cofilin/tropomyosin-type actin-binding protein
1121111121211122112314-3-3 protein
11212221311112111327Alkaline phosphatase
1111111111111111117Zinc carboxypeptidase
1015613171316164110813171716161824286Aldo/keto reductase family
151311131014141313121414131215151214237Myb-like DNA-binding domain
23333323333233444455Forkhead domain
13811216Glycosyl hydrolases family 32 N-terminal domain
111111111111111116Ribosomal protein L16p/L10e
22222222223221332238Ribosomal protein S14p/S29e
53332233333333443356FKBP-type peptidyl-prolyl cis-trans isomerase
41122112122212332234Glutathione peroxidase
11211111211111221223
8667877710678887767130Flavodoxin
11111111112111111119Calreticulin family
45645555644453334681Aminotransferase class-V
11111111111111221120Ribonucleotide reductase, small chain
353330312732313236323632333756363134614DEAD/DEAH box helicase
5856535949565956705459565856795859591,054Helicase conserved C-terminal domain
11111111111111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222222222222236Ribosomal protein L23
11111111111111111118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
12111211112221331228Ribosomal protein L5
43333333623333223355Pyridoxal-dependent decarboxylase conserved domain
21211111313111331229Citrate synthase, C-terminal domain
54555435755544665588GHMP kinases N terminal domain
557566556556657756102Biotin carboxylase, N-terminal domain
11111111111111111118Tryptophan synthase alpha chain
8578856888867878811134Pyridoxal-phosphate dependent enzyme
7798876898108787787139NUDIX domain
33434344334332444361pfkB family carbohydrate kinase
1113Glycosyl hydrolases family 28
11Luciferase-like monooxygenase
22222222222222222236Ribosomal protein L3
22222222223222332239Ribosomal protein L11, RNA binding domain
13121016151212161112131212812121512225Histidine phosphatase superfamily (branch 1)
11111111111111111118Thymidylate synthase
44444444444444444472ATP synthase alpha/beta chain, C terminal domain
65455544455545444381Calponin homology (CH) domain
54555545656444775490Glutamine amidotransferases class-II
22222222222522222239Ribosomal protein S15
21111111111111111119Fructose-1-6-bisphosphatase, N-terminal domain
12122222121222222232Ribonucleotide reductase, all-alpha domain
22222222222212332237Ribosomal protein S2
12223221222222441238SRF-type transcription factor (DNA-binding and dimerisation domain)
9759888977108791010810149GATA zinc finger
46271431302529349262322303624232943501Amino acid permease
22222222222222222337Prolyl oligopeptidase family
23233133124332443248Ribosomal protein L30p/L7e
14343446938433665682Histidine phosphatase superfamily (branch 2)
11111111111111115Respiratory-chain NADH dehydrogenase, 30 Kd subunit
54444444444445444474Aconitase family (aconitate hydratase)
11Glycosyl hydrolase family 10
12243432333452334354Glycosyl hydrolases family 17
22122222222222222235Ribosomal protein S5, N-terminal domain
11111111111111111118Nucleoside diphosphate kinase
22111221112221221228Ribosomal protein S10p/S20e
4553312663342332459Arrestin (or S-antigen), N-terminal domain
11111111111111111118Phosphoglucose isomerase
1111111111111111117Carbohydrate phosphorylase
12122212122222222232SecY translocase
11111111111111115Respiratory-chain NADH dehydrogenase, 49 Kd subunit
33222432223322332346Ribosomal protein L6
33323333333333333353Polyprenyl synthetase
34333433234433553361Hexokinase
33333333334333333355Dynamin family
11111111111111111118Transcription factor TFIID (or TATA-binding protein, TBP)
32122242221322111336Rieske [2Fe-2S] domain
3339Proton-conducting membrane transporter
669677777677768867124Biotin-requiring enzyme
22122222123222222235Phosphofructokinase
22222222223222332239Ribosomal protein S17
11111111111211221121Hydroxymethylglutaryl-coenzyme A reductase
34343443333423332458FGGY family of carbohydrate kinases, N-terminal domain
33733223434223334458Enoyl-CoA hydratase/isomerase
22222222223222332239Ribosomal protein S9/S16
22222222322222333240Transcription factor TFIIB repeat
676666664667766665108Cytidine and deoxycytidylate deaminase zinc-binding region
11111111111111115Molybdopterin oxidoreductase
22122222422221222236Chromo (CHRromatin Organisation MOdifier) domain
11111111111111111118Phosphatidylinositol-specific phospholipase C, Y domain
11121211111112111121Phosphatidylinositol-specific phospholipase C, X domain
86556454844544446692D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
11111111111211111119Malic enzyme, N-terminal domain
211111111111112211216-phosphogluconate dehydrogenase, C-terminal domain
221333239323323