PFAM Domains • Pterula gracilis CBS309.79 v1.0
Annotations/GenomesAgabi_varbisH97_2Copci1Galma1Lacbi2PleosPC15_2Ptegra1Schco3TotalAnnotation Description
PFAMs
6,9507,6789,4978,6567,9729,5258,59058,868
117 transmembrane receptor (rhodopsin family)
38434839474043298ATPase family associated with various cellular activities (AAA)
36466849394846332ABC transporter
444444428ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
16151516151615108Elongation factor Tu GTP binding domain
91011201191383Helix-loop-helix DNA-binding domain
4781073948Hsp20/alpha crystallin family
7813151110771Hsp70 protein
988888958KH domain
111115SH2 domain
30312940281527200SH3 domain
1112111511101181Actin
18937495222160383Ankyrin repeat
589987753ADP-ribosylation factor family
15132824241626146Eukaryotic aspartyl protease
333333321Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
22Cytochrome b/b6/petB
11211118Cytochrome c
666116121360Double-stranded RNA binding motif
191917181920112EF hand
12121184Fe-4S binding domain
11111117Fibronectin type III domain
11Globin
2714141381815109Glutathione S-transferase, C-terminal domain
232521116Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
7108101081164Homeodomain
12115Laminin EGF domain
222232215lactate/malate dehydrogenase, NAD binding domain
555755638Myosin head (motor domain)
1161341748614369114836Cytochrome P450
1361361922171551731621,171Protein kinase domain
13172014201111106Pyridine nucleotide-disulphide oxidoreductase
25323553262727225Ras family
688710111262Response regulator receiver domain
7210811101058RNase H
60646971675870459RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1113722Reverse transcriptase (RNA-dependent DNA polymerase)
1111127Copper/zinc superoxide dismutase (SODC)
123322316Iron/manganese superoxide dismutases, alpha-hairpin domain
71216593355Subtilase family
27203921273841213Sugar (and other) transporter
129131015121384Thioredoxin
555665537Tubulin/FtsZ family, GTPase domain
33764326von Willebrand factor type A domain
376060635722100399Zinc finger, C2H2 type
4348746659871369Zinc finger, C3HC4 type (RING finger)
8321393444522248Zinc knuckle
223222215Protein-tyrosine phosphatase
544980498066112490short chain dehydrogenase
27293531414347253Zinc-binding dehydrogenase
644445431Thiolase, N-terminal domain
328522325Beta-ketoacyl synthase, N-terminal domain
3337313232Fe-2S iron-sulfur cluster binding domain
33Papain family cysteine protease
11111117Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
9881378861Glutamine amidotransferase class-I
1010101310101073TCP-1/cpn60 chaperonin family
11ATP synthase A chain
443733327Glutamine synthetase, catalytic domain
11211118Triosephosphate isomerase
71114201316990E1-E2 ATPase
16161524171822128Core histone H2A/H2B/H3/H4
21332213Copper binding proteins, plastocyanin/azurin family
68899141266Alpha amylase, catalytic domain
566635536Phorbol esters/diacylglycerol binding domain (C1 domain)
253453426Bacterial transferase hexapeptide (six repeats)
335324323tRNA synthetases class I (I, L, M and V)
101215149131386Cyclin, N-terminal domain
19193415262826167Carboxylesterase family
544444429DNA polymerase family B
333434323ATP synthase subunit C
54343104262Peroxidase
3212234329Beta-lactamase
444454631C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
22313033272224189Calcineurin-like phosphoesterase
8112291319688Cellulase (glycosyl hydrolase family 5)
557555638tRNA synthetases class II (D, K and N)
34364141343837261Mitochondrial carrier protein
11recA bacterial DNA recombination protein
13161612131616102Aminotransferase class I and II
568874745Phosphoribosyl transferase domain
1314121310141490Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222322215Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
2111117Chaperonin 10 Kd subunit
14172718181218124C2 domain
2019242418719131PH domain
565769644bZIP transcription factor
24121815192216126Aldehyde dehydrogenase family
50426373537288441Fungal Zn(2)-Cys(6) binuclear cluster domain
20242723222425165Cytochrome b5-like Heme/Steroid binding domain
123323115Oxidoreductase molybdopterin binding domain
610988101162Oxidoreductase NAD-binding domain
19262922262422168SNF2 family N-terminal domain
223322216Ribosomal protein S7p/S5e
18232323202121149Ubiquitin-conjugating enzyme
656655538Isocitrate/isopropylmalate dehydrogenase
222222214Ribosomal Proteins L2, RNA binding domain
223222316Hsp90 protein
223222215Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
11Chitin recognition protein
424958537Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
211122312Cupin
13121210Annexin
8412Eukaryotic-type carbonic anhydrase
3333433222-oxoacid dehydrogenases acyltransferase (catalytic domain)
345123220Catalase
11111117Disintegrin
103114UDP-glucoronosyl and UDP-glucosyl transferase
5510656542Aminotransferase class-III
223422217Ribosomal protein S19
11111117DNA gyrase B
344352425Thiamine pyrophosphate enzyme, central domain
334434324Lyase
222312214Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11Sodium:neurotransmitter symporter family
11111117Adenylate and Guanylate cyclase catalytic domain
11111117ATP synthase delta (OSCP) subunit
11111117Orotidine 5'-phosphate decarboxylase / HUMPS family
121211210Indole-3-glycerol phosphate synthase
225222217Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
98810991063Kinesin motor domain
31323836292830224DnaJ domain
1414141414141498Proteasome subunit
427773333Major intrinsic protein
11111117ATP synthase
12532316Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11111117Profilin
21111219Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
13172021161413114Ubiquitin family
556556739Cofilin/tropomyosin-type actin-binding protein
12112221114-3-3 protein
323251319Alkaline phosphatase
111115212Zinc carboxypeptidase
21224724424760263Aldo/keto reductase family
131313141561185Myb-like DNA-binding domain
556554838Forkhead domain
1124Glycosyl hydrolases family 32 N-terminal domain
11112219Ribosomal protein L16p/L10e
122222213Ribosomal protein S14p/S29e
534685536FKBP-type peptidyl-prolyl cis-trans isomerase
11211118Glutathione peroxidase
22222212
766566743Flavodoxin
11111117Calreticulin family
61943412149Common central domain of tyrosinase
77761110957Aminotransferase class-V
224122316Ribonucleotide reductase, small chain
47514980555166399DEAD/DEAH box helicase
779288115927697637Helicase conserved C-terminal domain
112Fructose-bisphosphate aldolase class-I
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111117Ribosomal protein L5
454453732Pyridoxal-dependent decarboxylase conserved domain
354333324Citrate synthase, C-terminal domain
445655534GHMP kinases N terminal domain
767665542Biotin carboxylase, N-terminal domain
11111218Tryptophan synthase alpha chain
7777710853Pyridoxal-phosphate dependent enzyme
12171814151514105NUDIX domain
344555632pfkB family carbohydrate kinase
6317663344Glycosyl hydrolases family 28
222222315Ribosomal protein L3
222222214Ribosomal protein L11, RNA binding domain
97117108961Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
123Lipoxygenase
444444428ATP synthase alpha/beta chain, C terminal domain
444545531Calponin homology (CH) domain
547552533Glutamine amidotransferases class-II
122222213Ribosomal protein S15
35233151142Thaumatin family
11111117Fructose-1-6-bisphosphatase, N-terminal domain
11311119Ribonucleotide reductase, all-alpha domain
222212213Ribosomal protein S2
216322420SRF-type transcription factor (DNA-binding and dimerisation domain)
111112129151282GATA zinc finger
15133123201121134Amino acid permease
112Bacterial regulatory proteins, crp family
559887749Prolyl oligopeptidase family
11111218Ribosomal protein L30p/L7e
8598136958Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
544844433Aconitase family (aconitate hydratase)
26933528Glycosyl hydrolase family 10
334313219Glycosyl hydrolases family 17
122222213Ribosomal protein S5, N-terminal domain
222222214Nucleoside diphosphate kinase
234335121Tetraspanin family
2125Galactoside-binding lectin
222222214Ribosomal protein S10p/S20e
139842532Arrestin (or S-antigen), N-terminal domain
12211119Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11113119SecY translocase
11511211Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
349845639Polyprenyl synthetase
224222216Hexokinase
747867948Dynamin family
11121118Transcription factor TFIID (or TATA-binding protein, TBP)
345523224Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
11Phytochrome region
33Proton-conducting membrane transporter
109108147967Biotin-requiring enzyme
11111117Phosphofructokinase
222222214Ribosomal protein S17
11121118Hydroxymethylglutaryl-coenzyme A reductase
333233320FGGY family of carbohydrate kinases, N-terminal domain
11Sodium:dicarboxylate symporter family
771081010961Enoyl-CoA hydratase/isomerase
322222215Ribosomal protein S9/S16
233322217Transcription factor TFIIB repeat
456765639Cytidine and deoxycytidylate deaminase zinc-binding region
21111118Molybdopterin oxidoreductase
107122122729108Chromo (CHRromatin Organisation MOdifier) domain
333433423Phosphatidylinositol-specific phospholipase C, Y domain
333445325Phosphatidylinositol-specific phospholipase C, X domain
666453737D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
323632322Malic enzyme, N-terminal domain
111121296-phosphogluconate dehydrogenase, C-terminal domain
13179131216686Multicopper oxidase
9129878962WW domain
223222215Ribosomal RNA adenine dimethylase
1141241662211401371321,034WD domain, G-beta repeat
224343422Heavy-metal-associated domain
333333321Adenylate kinase
221223113Phosphoglucomutase/phosphomannomutase, C-terminal domain
12111219Ribosomal protein S8
122222112Ribosomal protein S11
657756642LIM domain
44Matrixin
332334321Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
123NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
322222215chorismate binding enzyme
33543332460s Acidic ribosomal protein
444654431Prenyltransferase and squalene oxidase repeat
577665743Protein kinase C terminal domain
1111116Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
101110109101171Bromodomain
8998108961Acyl-CoA dehydrogenase, C-terminal domain
16151916161517114Ubiquitin carboxyl-terminal hydrolase
111115Ribosomal protein L36
2234112Ribonuclease T2 family
6316464443HSF-type DNA-binding
222222214SRP54-type protein, GTPase domain
11111128Urease alpha-subunit, N-terminal domain
1451471241066Serine carboxypeptidase
989888858Phosphatidylinositol 3- and 4-kinase
222222315Transketolase, thiamine diphosphate binding domain
26822121Glycosyl hydrolases family 11
1111116WHEP-TRS domain
322222720Inositol monophosphatase family
544547534Glutaredoxin
635262327Isocitrate lyase family
21111118Serine hydroxymethyltransferase
322222417Iron-containing alcohol dehydrogenase
212222213Ribosomal protein L10
248854536KOW motif
11111117Ribosomal protein L34
11Ribosomal protein L33
232233318RF-1 domain
13232112Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111128Glucose-6-phosphate dehydrogenase, NAD binding domain
98149871368Protein phosphatase 2C
212333115Nucleotidyl transferase
376782235Carbonic anhydrase
11111117Phosphoribulokinase / Uridine kinase family
1081481281373Fatty acid desaturase
666666642MutS domain V
11111117Delta-aminolevulinic acid dehydratase
224253422Arginase family
667666643MCM P-loop domain
111222110Squalene/phytoene synthase
8813111111971FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
30303429323431220AMP-binding enzyme
13162449141415145G-protein alpha subunit
12262016172335149HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
345466937His Kinase A (phospho-acceptor) domain
424224422Armadillo/beta-catenin-like repeat
2629387319927221Tetratricopeptide repeat
434223321Ion transport protein
12111118DNA gyrase/topoisomerase IV, subunit A
81010121051065BRCA1 C Terminus (BRCT) domain
667764743Glycosyl transferases group 1
347334428Glycosyl transferase family 2
33111312SAM domain (Sterile alpha motif)
344432323linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
11286422Pectate lyase
11352214ribonuclease
11111128Urease, gamma subunit
333334322CoA-ligase
46105661653Phosphopantetheine attachment site
222232215Formyl transferase
1099910101168Metallopeptidase family M24
171516161711698Leucine Rich Repeat
41344420471651253alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
555746537PB1 domain
222222214Staphylococcal nuclease homologue
10911119121173Rab-GTPase-TBC domain
11111117Tudor domain
11221119WH1 domain
345433325Zinc finger, ZZ type
1111116HRDC domain
81110977961CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
463433427S1 RNA binding domain
111115HIUase/Transthyretin family
445464835AhpC/TSA family
345445429tRNA synthetases class I (W and Y)
11111218UvrD/REP helicase N-terminal domain
445448433Rhodanese-like domain
222222214Universal stress protein family
25284028272830206Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
576675642tRNA synthetase class II core domain (G, H, P, S and T)
11215Phage integrase family
222522217Tetrapyrrole (Corrin/Porphyrin) Methylases
11111128Glycosyl transferase family, a/b domain
123112212Class II Aldolase and Adducin N-terminal domain
224334422Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
656855641Fes/CIP4, and EFC/F-BAR homology domain
4411552435IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
334432322Phospholipase D Active site motif
111123110Regulator of G protein signaling domain
444454429GTPase-activator protein for Ras-like GTPase
61010787654RasGEF domain
7910886654RasGEF N-terminal motif
1112141312131388RhoGAP domain
15141716121413101RhoGEF domain
444444428SPRY domain
333343322RNA polymerase Rpb1, domain 2
11211118Guanylate kinase
444434326Gelsolin repeat
911101096964UBA/TS-N domain
15182118151015112PHD-finger
1212129GGL domain
6518555650HECT-domain (ubiquitin-transferase)
32123213Helix-hairpin-helix motif
132232215MSP (Major sperm protein) domain
766773642Ribonuclease III domain
226224220Region in Clathrin and VPS
335334425RanBP1 domain
222222214PPIC-type PPIASE domain
143531421Zn-finger in Ran binding protein and others
21222730201128159Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11111117B-box zinc finger
2564341034Poly(ADP-ribose) polymerase catalytic domain
222212213Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
93197294156117142641,135F-box domain
11121118Elongation factor 1 gamma, conserved domain
196811228Calpain family cysteine protease
122222314Copper fist DNA binding domain
677676544CRAL/TRIO domain
12195017122921160BTB/POZ domain
1517161119139100Ricin-type beta-trefoil lectin domain
11111117Inhibitor of Apoptosis domain
333322319Voltage gated chloride channel
915421711511110Caspase domain
81018288862GDSL-like Lipase/Acylhydrolase
112212211Poly-adenylate binding protein, unique domain
11131119POLO box duplicated region
11NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
15233818161924153ABC transporter transmembrane region
5126124Integrase core domain
333344323FAD binding domain
23121716Condensation domain
212121110S-adenosyl-L-homocysteine hydrolase, NAD binding domain
121131110HAMP domain
222222214ribosomal L5P family C-terminus
655555536Insulinase (Peptidase family M16)
444545430Dehydrogenase E1 component
11111117Lumazine binding domain
7771078753Elongation factor G C-terminus
544444429HMGL-like
444434427DnaJ central domain
133135117Starch binding domain
222223215Ribosomal protein L1p/L10e family
368578441Cation transporting ATPase, C-terminus
4891488556Cation transporter/ATPase, N-terminus
11121219dUTPase
546544432Aconitase C-terminal domain
343554327Amino acid kinase family
12121119N-(5'phosphoribosyl)anthranilate (PRA) isomerase
237432425Acyl transferase domain
11111128Urease beta subunit
222123214Dihydrodipicolinate synthetase family
24243228281330179haloacid dehalogenase-like hydrolase
112124314Glycosyl hydrolases family 2
119161111251497Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
11Acylphosphatase
11121118Adenylosuccinate synthetase
11111117Asparaginase, N-terminal
314433220Peptidase S24-like
1111217Inorganic pyrophosphatase
4654720551Glycosyl hydrolases family 16
243232319Glycosyl hydrolases family 15
561191362272NADH:flavin oxidoreductase / NADH oxidase family
111111173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
422122518Glycosyl hydrolase family 20, catalytic domain
645555535HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
34344012412823212GMC oxidoreductase
224224218Asparagine synthase
164452131225171Fungal cellulose binding domain
777766747Septin
11111117EF-1 guanine nucleotide exchange domain
11111117Homoserine dehydrogenase
223321215Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
333333321tRNA synthetases class I (E and Q), catalytic domain
112221110tRNA synthetases class I (R)
5591776756XPG N-terminal domain
9101191041366Metallo-beta-lactamase superfamily
1113F5/8 type C domain
444444529Choline/Carnitine o-acyltransferase
11111117Putative esterase
11111218Glycosyl hydrolase family 9
11111117Ferrochelatase
222232215Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11121118Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333333321RNB domain
525232726Dioxygenase
445535632CNH domain
222222214Diacylglycerol kinase catalytic domain
1112151612171295Dual specificity phosphatase, catalytic domain
11111117MyTH4 domain
445633429P21-Rho-binding domain
16141514151515104PX domain
235332220Ras association (RalGDS/AF-6) domain
444624428UBX domain
445645533VHS domain
11111117Phosphoinositide 3-kinase C2
222222214DAHP synthetase I family
533364428Carbon-nitrogen hydrolase
2211713N-acetyltransferase
11Geminivirus Rep catalytic domain
11111117Prephenate dehydratase
456453330Syntaxin
565574537Pumilio-family RNA binding repeat
566667541Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11121118Pterin binding enzyme
11111117ER lumen protein retaining receptor
222222214Glycoprotease family
11111117Histidinol dehydrogenase
334333322impB/mucB/samB family
1111116
11111117Ribosomal L15
11111319Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
11111117Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
169168242Glycosyl hydrolase family 7
222222315RNA pseudouridylate synthase
667766745Histone deacetylase domain
325426325POT family
122622217PWWP domain
15183329192127162SET domain
355235528Isochorismatase family
122223214Permease family
11111117Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
59123875884XPG I-region
111115Acetokinase family
1111116DNA photolyase
11215Cation-independent mannose-6-phosphate receptor repeat