PFAM Domains • Suillus luteus UH-Slu-Lm8-n1 v2.0
Please note that this organism is for archival use only. Please see the current Suillus luteus UH-Slu-Lm8-n1 v3.0 site for the latest data and information.
Annotations/GenomesBoled1Paxru1Rhisa1Rhivi1Sclci1SerlaS7_9_2Suibr1Suilu1Suilu3TotalAnnotation Description
PFAMs
7,9317,1698,9158,3158,0997,5269,0578,2228,34373,577
384249413842444446384ATPase family associated with various cellular activities (AAA)
313449413738504342365ABC transporter
441059465754ATP synthase alpha/beta family, nucleotide-binding domain
112EGF-like domain
141314131414191313127Elongation factor Tu GTP binding domain
121112121211121313108Helix-loop-helix DNA-binding domain
138978611101082Hsp20/alpha crystallin family
778120158161525194Hsp70 protein
788108878872KH domain
1111111119SH2 domain
262725282624262525232SH3 domain
101012121010131312102Actin
665220242151332626319Ankyrin repeat
118877798873ADP-ribosylation factor family
422246432029413636315Eukaryotic aspartyl protease
33333343328Cyclic nucleotide-binding domain
112Cytochrome b(C-terminal)/b6/petD
1214Cytochrome b/b6/petB
11111211110Cytochrome c
881517788101091Double-stranded RNA binding motif
171618181816171717154EF hand
111112111104Fe-4S binding domain
111111118Fibronectin type III domain
20820191322282121172Glutathione S-transferase, C-terminal domain
11222121113Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1491513910131314110Homeodomain
11Laminin EGF domain
22224225627lactate/malate dehydrogenase, NAD binding domain
2766621766691Myosin head (motor domain)
1261121662201001521111121131,212Cytochrome P450
1711532952292541432242022271,898Protein kinase domain
141114221816171818148Pyridine nucleotide-disulphide oxidoreductase
262233242823282627237Ras family
66667976659Response regulator receiver domain
314125392874RNase H
676269697665716565609RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
13233Reverse transcriptase (RNA-dependent DNA polymerase)
11Serpin (serine protease inhibitor)
111111118Copper/zinc superoxide dismutase (SODC)
42232223323Iron/manganese superoxide dismutases, alpha-hairpin domain
22242222220Subtilase family
352628343036333130283Sugar (and other) transporter
101113101410121111102Thioredoxin
7511510555558Tubulin/FtsZ family, GTPase domain
64548398855von Willebrand factor type A domain
735755558238977689622Zinc finger, C2H2 type
615870655046595659524Zinc finger, C3HC4 type (RING finger)
1628181181052531341Zinc knuckle
22222332220Protein-tyrosine phosphatase
634473833675625959554short chain dehydrogenase
311631342041313030264Zinc-binding dehydrogenase
43653455641Thiolase, N-terminal domain
343221134436Beta-ketoacyl synthase, N-terminal domain
333353333292Fe-2S iron-sulfur cluster binding domain
1111111119Enolase, C-terminal TIM barrel domain
2215Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
78798888972Glutamine amidotransferase class-I
151010112110121112112TCP-1/cpn60 chaperonin family
112ATP synthase A chain
321887334452Glutamine synthetase, catalytic domain
1111111119Triosephosphate isomerase
141213151611181314126E1-E2 ATPase
161922202018272222186Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
66755676654Alpha amylase, catalytic domain
54565565546Phorbol esters/diacylglycerol binding domain (C1 domain)
34333333328Bacterial transferase hexapeptide (six repeats)
74454383442tRNA synthetases class I (I, L, M and V)
1010999171191094Cyclin, N-terminal domain
22157181030877124Carboxylesterase family
2444444430DNA polymerase family B
53443333331ATP synthase subunit C
1111111119Peroxidase
6621411122Beta-lactamase
44444444436C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
323031272826302929262Calcineurin-like phosphoesterase
1010118514109986Cellulase (glycosyl hydrolase family 5)
55555665547tRNA synthetases class II (D, K and N)
353442393837433737342Mitochondrial carrier protein
11114recA bacterial DNA recombination protein
161713141415171616138Aminotransferase class I and II
77876677762Phosphoribosyl transferase domain
151213121413131313118Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111119Phosphoglycerate kinase
22222222218Ribosomal protein S4/S9 N-terminal domain
22222222218Ribosomal protein S12/S23
1111111119Chaperonin 10 Kd subunit
131216171413161414129C2 domain
191817171917181818161PH domain
55666777756bZIP transcription factor
171115151516161717139Aldehyde dehydrogenase family
595451534944575758482Fungal Zn(2)-Cys(6) binuclear cluster domain
292422243026242323225Cytochrome b5-like Heme/Steroid binding domain
22222433323Oxidoreductase molybdopterin binding domain
76997811101077Oxidoreductase NAD-binding domain
242224222722362633236SNF2 family N-terminal domain
22222233321Ribosomal protein S7p/S5e
221921212120202121186Ubiquitin-conjugating enzyme
56545575547Isocitrate/isopropylmalate dehydrogenase
22322222219Ribosomal Proteins L2, RNA binding domain
22223232220Hsp90 protein
22222222218Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
12112111111Dihydrofolate reductase
123Cysteine-rich secretory protein family
1111111119Ribosomal protein S3, C-terminal domain
1131221112Cupin
333333544312-oxoacid dehydrogenases acyltransferase (catalytic domain)
22321433323Catalase
11UDP-glucoronosyl and UDP-glucosyl transferase
555617555558Aminotransferase class-III
22222222218Ribosomal protein S19
1111111119DNA gyrase B
43343333329Thiamine pyrophosphate enzyme, central domain
43466455542Lyase
11221122214Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11411122215Adenylate and Guanylate cyclase catalytic domain
1111111119ATP synthase delta (OSCP) subunit
1111111119Orotidine 5'-phosphate decarboxylase / HUMPS family
11Bacterial DNA-binding protein
1111111119Indole-3-glycerol phosphate synthase
11112311112Aromatic amino acid lyase
1111111119Pyruvate kinase, barrel domain
99991110109985Kinesin motor domain
293037302928323231278DnaJ domain
141415141415151414129Proteasome subunit
34673355541Major intrinsic protein
1111111119ATP synthase
61324382231Glycosyl hydrolase family 1
11111111193'5'-cyclic nucleotide phosphodiesterase
21111111110Profilin
22222222218Ribosomal protein L22p/L17e
22222222218Ribosomal protein L14p/L23e
251918161616211515161Ubiquitin family
65556555547Cofilin/tropomyosin-type actin-binding protein
2222322332114-3-3 protein
11Zinc carboxypeptidase
302446541843414445345Aldo/keto reductase family
131213141311151414119Myb-like DNA-binding domain
65665455547Forkhead domain
1111111119Ribosomal protein L16p/L10e
22322222219Ribosomal protein S14p/S29e
33333333327FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
12111111110
75566565651Flavodoxin
1111111119Calreticulin family
35112311118Common central domain of tyrosinase
55875888862Aminotransferase class-V
45322123527Ribonucleotide reductase, small chain
585746455552645659492DEAD/DEAH box helicase
97100818289911129696844Helicase conserved C-terminal domain
11114Fructose-bisphosphate aldolase class-I
1111111119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222218Ribosomal protein L23
1111111119Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11111131111Ribosomal protein L5
42474544438Pyridoxal-dependent decarboxylase conserved domain
32452334430Citrate synthase, C-terminal domain
55455555544GHMP kinases N terminal domain
75965696659Biotin carboxylase, N-terminal domain
12111111110Tryptophan synthase alpha chain
97879998874Pyridoxal-phosphate dependent enzyme
121514161317141313127NUDIX domain
43334432228pfkB family carbohydrate kinase
42233733330Glycosyl hydrolases family 28
22223222219Ribosomal protein L3
22222222218Ribosomal protein L11, RNA binding domain
987810799976Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
44954465546ATP synthase alpha/beta chain, C terminal domain
54545554441Calponin homology (CH) domain
55665666651Glutamine amidotransferases class-II
23322222220Ribosomal protein S15
21112512217Thaumatin family
1111111119Fructose-1-6-bisphosphatase, N-terminal domain
1111111119Ribonucleotide reductase, all-alpha domain
22222222218Ribosomal protein S2
22222222218SRF-type transcription factor (DNA-binding and dimerisation domain)
81010191210121011102GATA zinc finger
232534372625353335273Amino acid permease
99864109101075Prolyl oligopeptidase family
1111111119Ribosomal protein L30p/L7e
121221181711151313132Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
441154454445Aconitase family (aconitate hydratase)
2114Glycosyl hydrolase family 10
1111111119Glycosyl hydrolases family 17
22212222217Ribosomal protein S5, N-terminal domain
1111111119Nucleoside diphosphate kinase
1121211110Tetraspanin family
22223122218Ribosomal protein S10p/S20e
52451365536Arrestin (or S-antigen), N-terminal domain
21122111112Phosphoglucose isomerase
1122131112Carbohydrate phosphorylase
1111111119SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222222218Ribosomal protein L6
55856687757Polyprenyl synthetase
22222222218Hexokinase
6107410987768Dynamin family
11121121111Transcription factor TFIID (or TATA-binding protein, TBP)
112RTX calcium-binding nonapeptide repeat (4 copies)
24445433332Rieske [2Fe-2S] domain
12115Proton-conducting membrane transporter
778878119974Biotin-requiring enzyme
21113111112Phosphofructokinase
22222122217Ribosomal protein S17
1111111119Hydroxymethylglutaryl-coenzyme A reductase
24344333329FGGY family of carbohydrate kinases, N-terminal domain
791188879976Enoyl-CoA hydratase/isomerase
22222222218Ribosomal protein S9/S16
32135222222Transcription factor TFIIB repeat
88896777767Cytidine and deoxycytidylate deaminase zinc-binding region
21111111110Molybdopterin oxidoreductase
10101110831391014170Chromo (CHRromatin Organisation MOdifier) domain
12332222219Phosphatidylinositol-specific phospholipase C, Y domain
12442234426Phosphatidylinositol-specific phospholipase C, X domain
54664665547D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22331344426Malic enzyme, N-terminal domain
111211111106-phosphogluconate dehydrogenase, C-terminal domain
10171617116201921137Multicopper oxidase
1197023108693344277WW domain
12222223521Ribosomal RNA adenine dimethylase
2901775773852061379466195633,900WD domain, G-beta repeat
43543344434Heavy-metal-associated domain
44334333330Adenylate kinase
21212222216Phosphoglucomutase/phosphomannomutase, C-terminal domain
11121122213Ribosomal protein S8
11221222215Ribosomal protein S11
66986766660LIM domain
11Matrixin
22333233324Regulator of chromosome condensation (RCC1) repeat
22222222218Ribosomal protein S13/S18
11114NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
23232222422chorismate binding enzyme
3223332222260s Acidic ribosomal protein
58454444442Prenyltransferase and squalene oxidase repeat
97868776664Protein kinase C terminal domain
1111111119Single-strand binding protein family
1111111119S-adenosylmethionine synthetase, N-terminal domain
141035101210111111124Bromodomain
76787977765Acyl-CoA dehydrogenase, C-terminal domain
141418151415151515135Ubiquitin carboxyl-terminal hydrolase
1111111119Ribosomal protein L36
2122222215Ribonuclease T2 family
11Gonadotropin-releasing hormone
64446357847HSF-type DNA-binding
22222223320SRP54-type protein, GTPase domain
11215111114Urease alpha-subunit, N-terminal domain
16613181212131010110Serine carboxypeptidase
88778877868Phosphatidylinositol 3- and 4-kinase
22223233322Transketolase, thiamine diphosphate binding domain
1111111119WHEP-TRS domain
42223222221Inositol monophosphatase family
56445444440Glutaredoxin
33333333327Isocitrate lyase family
1111111119Serine hydroxymethyltransferase
22322222219Iron-containing alcohol dehydrogenase
22212222217Ribosomal protein L10
24454477744KOW motif
1111111119Ribosomal protein L34
32232333324RF-1 domain
31441444429Sodium:solute symporter family
211111119Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11511111113IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
7813861099979Protein phosphatase 2C
23323363328Nucleotidyl transferase
24326444433Carbonic anhydrase
11111121110Phosphoribulokinase / Uridine kinase family
13965161266679Fatty acid desaturase
66666766655MutS domain V
11232111113Delta-aminolevulinic acid dehydratase
33462386641Arginase family
66666676655MCM P-loop domain
12121111111Squalene/phytoene synthase
111012141210131212106FHA domain
253041472349293032306AMP-binding enzyme
181612141114131111120G-protein alpha subunit
201616161615171717150HMG (high mobility group) box
1113NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1113Cytochrome c oxidase subunit III
13333453328His Kinase A (phospho-acceptor) domain
33334344431Armadillo/beta-catenin-like repeat
462628302635303130282Tetratricopeptide repeat
72332243329Ion transport protein
11111121110DNA gyrase/topoisomerase IV, subunit A
12910910911101090BRCA1 C Terminus (BRCT) domain
76977666660Glycosyl transferases group 1
34447564441Glycosyl transferase family 2
1132132215SAM domain (Sterile alpha motif)
33442444432linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
134ribonuclease
11211111110Urease, gamma subunit
33333333327CoA-ligase
7749324107778Phosphopantetheine attachment site
42223222221Formyl transferase
109101210109101090Metallopeptidase family M24
171526171614201818161Leucine Rich Repeat
292328261640272728244alpha/beta hydrolase fold
33333333327RNA polymerase Rpb2, domain 6
55555555545PB1 domain
22222222218Staphylococcal nuclease homologue
11911101091091089Rab-GTPase-TBC domain
1111111119Tudor domain
22221222217WH1 domain
33332333326Zinc finger, ZZ type
11111117HRDC domain
98998999979CBS domain
22222222218Ribosomal protein L13
22223222219Ribosomal protein L4/L1 family
1111111119Clp protease
44445344436S1 RNA binding domain
1111111119HIUase/Transthyretin family
45556444441AhpC/TSA family
94444464443tRNA synthetases class I (W and Y)
1111116UvrD/REP helicase N-terminal domain
44434533333Rhodanese-like domain
12322222218Universal stress protein family
302230272432272627245Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
12111111110C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
66866667758tRNA synthetase class II core domain (G, H, P, S and T)
117413Phage integrase family
22222245425Tetrapyrrole (Corrin/Porphyrin) Methylases
11131133317Glycosyl transferase family, a/b domain
12331143321Class II Aldolase and Adducin N-terminal domain
33336333330Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55455555544Fes/CIP4, and EFC/F-BAR homology domain
43453354435IQ calmodulin-binding motif
22222222218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
43343443331Phospholipase D Active site motif
1111111119Regulator of G protein signaling domain
44444444436GTPase-activator protein for Ras-like GTPase
66465676652RasGEF domain
77697810111277RasGEF N-terminal motif
121313131213151212115RhoGAP domain
141314131212131414119RhoGEF domain
44444444436SPRY domain
33344333329RNA polymerase Rpb1, domain 2
1111111119Guanylate kinase
32333544633Gelsolin repeat
9711779109978UBA/TS-N domain
181919191519171819163PHD-finger
11121118GGL domain
55555555545HECT-domain (ubiquitin-transferase)
42124111117Helix-hairpin-helix motif
1111111119MSP (Major sperm protein) domain
79887797769Ribonuclease III domain
22222253424Region in Clathrin and VPS
33336333330RanBP1 domain
22222222218PPIC-type PPIASE domain
43322133324Zn-finger in Ran binding protein and others
212525222117252625207Zinc finger C-x8-C-x5-C-x3-H type (and similar)
111115B-box zinc finger
435431544446Poly(ADP-ribose) polymerase catalytic domain
22222222218Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
995110785112531088592792F-box domain
11211112212Elongation factor 1 gamma, conserved domain
111112119Calpain family cysteine protease
22222222218Copper fist DNA binding domain
667865108864CRAL/TRIO domain
151423201817171717158BTB/POZ domain
55232219Ricin-type beta-trefoil lectin domain
1111111119Inhibitor of Apoptosis domain
22222222218Voltage gated chloride channel
1391585688880Caspase domain
715116544447GDSL-like Lipase/Acylhydrolase
1111111119Poly-adenylate binding protein, unique domain
1111111119POLO box duplicated region
112NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
111121191818151415142ABC transporter transmembrane region
748863Integrase core domain
33333353329FAD binding domain
241131111125Condensation domain
11111132213S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11111121110HAMP domain
22222232219ribosomal L5P family C-terminus
65555655547Insulinase (Peptidase family M16)
55545455543Dehydrogenase E1 component
1111111119Lumazine binding domain
66666677757Elongation factor G C-terminus
45445444438HMGL-like
44444444436DnaJ central domain
1211211110Starch binding domain
22312222218Ribosomal protein L1p/L10e family
55677568958Cation transporting ATPase, C-terminus
75656777757Cation transporter/ATPase, N-terminus
1111111119dUTPase
34444454436Aconitase C-terminal domain
33433353330Amino acid kinase family
11111121110N-(5'phosphoribosyl)anthranilate (PRA) isomerase
443361354446Acyl transferase domain
11312111112Urease beta subunit
2122242217Dihydrodipicolinate synthetase family
262430262330282929245haloacid dehalogenase-like hydrolase
1111111119Glycosyl hydrolases family 2
121511127911101097Glycosyl hydrolases family 18
1111111119Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
21111111110Adenylosuccinate synthetase
11121111110Asparaginase, N-terminal
22352322223Peptidase S24-like
1111111119Inorganic pyrophosphatase
33333233326Glycosyl hydrolases family 16
12222222217Glycosyl hydrolases family 15