PFAM Domains • Cryptococcus terricola JCM 24523 v1.0
Annotations/GenomesCrycu1Cryne_H99_1Cryte1Cryvi1Diocr1Treme1Trich1Triol1TotalAnnotation Description
PFAMs
6,3095,7326,4465,5639,5565,5656,1756,30951,655
112157 transmembrane receptor (rhodopsin family)
3331313457363634292ATPase family associated with various cellular activities (AAA)
3634433883343537340ABC transporter
4444544433ATP synthase alpha/beta family, nucleotide-binding domain
2114EGF-like domain
1313121319131313109Elongation factor Tu GTP binding domain
991181288974Helix-loop-helix DNA-binding domain
7878978761Hsp70 protein
88681177863KH domain
11114SH2 domain
2222231929222223182SH3 domain
910991999983Actin
1918171633151719154Ankyrin repeat
2111216PAN domain
88771288866ADP-ribosylation factor family
19899119141897Eukaryotic aspartyl protease
3343333325Cyclic nucleotide-binding domain
112Cytochrome b/b6/petB
111111118Cytochrome c
2221119Double-stranded RNA binding motif
1716151422151616131EF hand
12114111124Fe-4S binding domain
2111128Fibronectin type III domain
1121117Globin
68641328754Glutathione S-transferase, C-terminal domain
2242312218Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
4624845437Homeodomain
112Laminin EGF domain
2232623222lactate/malate dehydrogenase, NAD binding domain
6485775648Myosin head (motor domain)
16520162281116114Cytochrome P450
9489114104166969595853Protein kinase domain
1511131216111315106Pyridine nucleotide-disulphide oxidoreductase
2323242331242423195Ras family
131024221791313121Response regulator receiver domain
2112121212RNase H
5562555281595755476RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1212Reverse transcriptase (RNA-dependent DNA polymerase)
4111213417Copper/zinc superoxide dismutase (SODC)
1111212110Iron/manganese superoxide dismutases, alpha-hairpin domain
2333632224Subtilase family
3862962974255239415Sugar (and other) transporter
10888128101074Thioredoxin
4434744434Tubulin/FtsZ family, GTPase domain
521614423von Willebrand factor type A domain
2724292439282928228Zinc finger, C2H2 type
4032403360373841321Zinc finger, C3HC4 type (RING finger)
8111192015077223Zinc knuckle
2232322218Protein-tyrosine phosphatase
4735693885344449401short chain dehydrogenase
3625332754173636264Zinc-binding dehydrogenase
8344537842Thiolase, N-terminal domain
111121119Beta-ketoacyl synthase, N-terminal domain
43457434342Fe-2S iron-sulfur cluster binding domain
1231111111Enolase, C-terminal TIM barrel domain
235Cytochrome C and Quinol oxidase polypeptide I
112Cytochrome C oxidase subunit II, periplasmic domain
77781187762Glutamine amidotransferase class-I
10109101310111083TCP-1/cpn60 chaperonin family
213ATP synthase A chain
2222222216Glutamine synthetase, catalytic domain
111111118Triosephosphate isomerase
11101511169101193E1-E2 ATPase
128881611111286Core histone H2A/H2B/H3/H4
791692097784Alpha amylase, catalytic domain
4333432426Phorbol esters/diacylglycerol binding domain (C1 domain)
59651586660Bacterial transferase hexapeptide (six repeats)
3333633327tRNA synthetases class I (I, L, M and V)
991281499979Cyclin, N-terminal domain
11410865101165Carboxylesterase family
4444644434DNA polymerase family B
3533333326ATP synthase subunit C
1124Legume lectin domain
3222422320Peroxidase
1110217281161Beta-lactamase
221229C-5 cytosine-specific DNA methylase
112NADH dehydrogenase
1113Nitrogenase component 1 type Oxidoreductase
1819181732182116159Calcineurin-like phosphoesterase
351081164451Cellulase (glycosyl hydrolase family 5)
5656956547tRNA synthetases class II (D, K and N)
3634383257333936305Mitochondrial carrier protein
1616181622162116141Aminotransferase class I and II
77761167758Phosphoribosyl transferase domain
1213121218121212103Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
2222222216Ribosomal protein S4/S9 N-terminal domain
2222322217Ribosomal protein S12/S23
111121119Chaperonin 10 Kd subunit
141291117121114100C2 domain
1516131021171416122PH domain
6787956654bZIP transcription factor
201418101591819123Aldehyde dehydrogenase family
10577975810153100102693Fungal Zn(2)-Cys(6) binuclear cluster domain
2319211832172123174Cytochrome b5-like Heme/Steroid binding domain
325Oxidoreductase molybdopterin binding domain
97881059965Oxidoreductase NAD-binding domain
2021201935192120175SNF2 family N-terminal domain
2222422218Ribosomal protein S7p/S5e
1919171628201919157Ubiquitin-conjugating enzyme
67961157657Isocitrate/isopropylmalate dehydrogenase
1222322216Ribosomal Proteins L2, RNA binding domain
2222422218Hsp90 protein
2222322217Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111121119Dihydrofolate reductase
4212634527Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
31239Cupin
111121119Annexin
224Eukaryotic-type carbonic anhydrase
112Chalcone and stilbene synthases, N-terminal domain
33225343252-oxoacid dehydrogenases acyltransferase (catalytic domain)
2463312223Catalase
1211211110Disintegrin
3811UDP-glucoronosyl and UDP-glucosyl transferase
1088510691066Aminotransferase class-III
2222422218Ribosomal protein S19
111121119DNA gyrase B
4254323427Thiamine pyrophosphate enzyme, central domain
3333534327Lyase
2222222216Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1214Sodium:neurotransmitter symporter family
111121119Adenylate and Guanylate cyclase catalytic domain
111121119ATP synthase delta (OSCP) subunit
111111118Orotidine 5'-phosphate decarboxylase / HUMPS family
111121119Indole-3-glycerol phosphate synthase
112Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
91011913129982Kinesin motor domain
2323242435252623203DnaJ domain
1414141419141414117Proteasome subunit
3142714325Major intrinsic protein
111121119ATP synthase
282312220Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11Protease inhibitor/seed storage/LTP family
111111118Profilin
1112112110Ribosomal protein L22p/L17e
2222322217Ribosomal protein L14p/L23e
10121111171091090Ubiquitin family
5535855541Cofilin/tropomyosin-type actin-binding protein
11112111914-3-3 protein
1123119Alkaline phosphatase
111111118Zinc carboxypeptidase
2021452548232020222Aldo/keto reductase family
117651211121175Myb-like DNA-binding domain
5653745439Forkhead domain
211121210Glycosyl hydrolases family 32 N-terminal domain
111111118Ribosomal protein L16p/L10e
2222522219Ribosomal protein S14p/S29e
3333733328FKBP-type peptidyl-prolyl cis-trans isomerase
2222322217Glutathione peroxidase
111121119
11Dehydrin
7554446742Flavodoxin
112Tropomyosin
111121119Calreticulin family
4587846446Aminotransferase class-V
2211322215Ribonucleotide reductase, small chain
3841384062373638330DEAD/DEAH box helicase
66717066109656566578Helicase conserved C-terminal domain
111121119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2221422217Ribosomal protein L23
3111211313Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1211222112Ribosomal protein L5
4354854437Pyridoxal-dependent decarboxylase conserved domain
111111118Citrate synthase, C-terminal domain
5554845440GHMP kinases N terminal domain
7655657748Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
11879116101173Pyridoxal-phosphate dependent enzyme
149111222101314105NUDIX domain
66431147647pfkB family carbohydrate kinase
115561120Glycosyl hydrolases family 28
134Luciferase-like monooxygenase
2222322217Ribosomal protein L3
2222422218Ribosomal protein L11, RNA binding domain
10987249121089Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
11Lipoxygenase
4444544433ATP synthase alpha/beta chain, C terminal domain
4344544432Calponin homology (CH) domain
3445945438Glutamine amidotransferases class-II
2222322217Ribosomal protein S15
2223312Thaumatin family
111121119Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
2222322217Ribosomal protein S2
2212322216SRF-type transcription factor (DNA-binding and dimerisation domain)
11128916910984GATA zinc finger
35161791753036165Amino acid permease
2433422222Prolyl oligopeptidase family
1121322113Ribosomal protein L30p/L7e
5534754538Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4555544436Aconitase family (aconitate hydratase)
1113Glycosyl hydrolase family 10
111115Glycosyl hydrolases family 17
2222212215Ribosomal protein S5, N-terminal domain
2211312214Nucleoside diphosphate kinase
1111116Tetraspanin family
1221211111Ribosomal protein S10p/S20e
2222321216Arrestin (or S-antigen), N-terminal domain
1111212110Phosphoglucose isomerase
111121119Carbohydrate phosphorylase
111211119SecY translocase
111121119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
3333533326Polyprenyl synthetase
2222322217Hexokinase
3323933329Dynamin family
111121119Transcription factor TFIID (or TATA-binding protein, TBP)
3324543327Rieske [2Fe-2S] domain
22Bacterial regulatory proteins, lacI family
11111117Phytochrome region
2428Proton-conducting membrane transporter
98661069963Biotin-requiring enzyme
1111212110Phosphofructokinase
2222322217Ribosomal protein S17
111111118Hydroxymethylglutaryl-coenzyme A reductase
4333524428FGGY family of carbohydrate kinases, N-terminal domain
22Sodium:dicarboxylate symporter family
14554104121468Enoyl-CoA hydratase/isomerase
2222322217Ribosomal protein S9/S16
2222312216Transcription factor TFIIB repeat
81054546850Cytidine and deoxycytidylate deaminase zinc-binding region
1112211110Molybdopterin oxidoreductase
58538276567Chromo (CHRromatin Organisation MOdifier) domain
2111211211Phosphatidylinositol-specific phospholipase C, Y domain
4211412419Phosphatidylinositol-specific phospholipase C, X domain
791161099768D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2342422221Malic enzyme, N-terminal domain
11PEP-utilising enzyme, mobile domain
11212211116-phosphogluconate dehydrogenase, C-terminal domain
5552144531Multicopper oxidase
879614810870WW domain
1112212111Ribosomal RNA adenine dimethylase
1021021069815897102102867WD domain, G-beta repeat
3154634329Heavy-metal-associated domain
3333533326Adenylate kinase
2122322216Phosphoglucomutase/phosphomannomutase, C-terminal domain
111211119Ribosomal protein S8
111111118Ribosomal protein S11
5444844437LIM domain
2121126217Regulator of chromosome condensation (RCC1) repeat
2222222216Ribosomal protein S13/S18
22NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
2223422219chorismate binding enzyme
332333232260s Acidic ribosomal protein
4445744436Prenyltransferase and squalene oxidase repeat
5434943436Protein kinase C terminal domain
2111312213Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
1010109169111186Bromodomain
1777577111778Acyl-CoA dehydrogenase, C-terminal domain
1414141424181414126Ubiquitin carboxyl-terminal hydrolase
111121119Ribosomal protein L36
123Ribonuclease T2 family
11Gonadotropin-releasing hormone
3485956545HSF-type DNA-binding
2222422218SRP54-type protein, GTPase domain
111111118Urease alpha-subunit, N-terminal domain
3733632330Serine carboxypeptidase
78881287765Phosphatidylinositol 3- and 4-kinase
1532522121Transketolase, thiamine diphosphate binding domain
11WHEP-TRS domain
3333824329Inositol monophosphatase family
4444644434Glutaredoxin
2121213214Isocitrate lyase family
111121119Serine hydroxymethyltransferase
2131111212Iron-containing alcohol dehydrogenase
2222222216Ribosomal protein L10
5454654538KOW motif
11121118Ribosomal protein L34
111115Ribosomal protein L33
3322533324RF-1 domain
113121110Sodium:solute symporter family
111111118Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
111111118IMP dehydrogenase / GMP reductase domain
1123111111Glucose-6-phosphate dehydrogenase, NAD binding domain
55661255549Protein phosphatase 2C
2222422218Nucleotidyl transferase
5231524527Carbonic anhydrase
111112119Phosphoribulokinase / Uridine kinase family
5445656540Fatty acid desaturase
66661167755MutS domain V
111121119Delta-aminolevulinic acid dehydratase
3331113217Arginase family
6666966651MCM P-loop domain
1112321112Squalene/phytoene synthase
77651078757FHA domain
213NADH-ubiquinone/plastoquinone oxidoreductase chain 6
33914141682533152AMP-binding enzyme
3333533326G-protein alpha subunit
6787866654HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
1113Cytochrome c oxidase subunit III
1071815147101091His Kinase A (phospho-acceptor) domain
2234422221Armadillo/beta-catenin-like repeat
1922262125162219170Tetratricopeptide repeat
4333833431Ion transport protein
111121119DNA gyrase/topoisomerase IV, subunit A
7791115108774BRCA1 C Terminus (BRCT) domain
67971177660Glycosyl transferases group 1
2233422220Glycosyl transferase family 2
11114SAM domain (Sterile alpha motif)
1211211110linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
11ribonuclease
111111118Urease, gamma subunit
4353734433CoA-ligase
2234823226Phosphopantetheine attachment site
3322534325Formyl transferase
11101010139111185Metallopeptidase family M24
1617131427192016142Leucine Rich Repeat
209261023122121142alpha/beta hydrolase fold
3334433326RNA polymerase Rpb2, domain 6
3333633327PB1 domain
2222322217Staphylococcal nuclease homologue
10989188101082Rab-GTPase-TBC domain
111121119Tudor domain
111111118WH1 domain
4344444330Zinc finger, ZZ type
2211422115HRDC domain
87751178861CBS domain
2222322217Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
4353744434S1 RNA binding domain
11111218HIUase/Transthyretin family
3333544328AhpC/TSA family
4344544432tRNA synthetases class I (W and Y)
1121211110UvrD/REP helicase N-terminal domain
5443834536Rhodanese-like domain
2222322217Universal stress protein family
3918242058173839253Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222422218AIR synthase related protein, N-terminal domain
6666866650tRNA synthetase class II core domain (G, H, P, S and T)
123Phage integrase family
2222422218Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
6241413627Class II Aldolase and Adducin N-terminal domain
2122323217Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
3542643330Fes/CIP4, and EFC/F-BAR homology domain
6722333632IQ calmodulin-binding motif
2222322217Phosphoinositide 3-kinase family, accessory domain (PIK domain)
4433645433Phospholipase D Active site motif
111111118Regulator of G protein signaling domain
4343344429GTPase-activator protein for Ras-like GTPase
3333533326RasGEF domain
3343333325RasGEF N-terminal motif
1091081811101086RhoGAP domain
11141091712111195RhoGEF domain
3333523325SPRY domain
3333433325RNA polymerase Rpb1, domain 2
1111212110Guanylate kinase
2322432220Gelsolin repeat
9881214717782UBA/TS-N domain
1615141721131617129PHD-finger
1211117GGL domain
4454644435HECT-domain (ubiquitin-transferase)
221211110Helix-hairpin-helix motif
111121119MSP (Major sperm protein) domain
45441183443Ribonuclease III domain
2222222216Region in Clathrin and VPS
3322423322RanBP1 domain
111111118PPIC-type PPIASE domain
4112431420Zn-finger in Ran binding protein and others
2019131525141719142Zinc finger C-x8-C-x5-C-x3-H type (and similar)
221128Poly(ADP-ribose) polymerase catalytic domain
111111118Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
29201616300192631457F-box domain
111111118Elongation factor 1 gamma, conserved domain
1113Calpain family cysteine protease
111121119Copper fist DNA binding domain
6557956649CRAL/TRIO domain
45521682446BTB/POZ domain
27591317111129122Ricin-type beta-trefoil lectin domain
111121119Inhibitor of Apoptosis domain
2222322217Voltage gated chloride channel
2211422216Caspase domain
4396823439GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
111121119POLO box duplicated region
213NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
1615201841191416159ABC transporter transmembrane region
41317Integrase core domain
5344534533FAD binding domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111111118HAMP domain
2222422218ribosomal L5P family C-terminus
5556756544Insulinase (Peptidase family M16)
4322344426Dehydrogenase E1 component
111111118Lumazine binding domain
5555855543Elongation factor G C-terminus
4433644432HMGL-like
4444844436DnaJ central domain
2222222216Ribosomal protein L1p/L10e family
6475835644Cation transporting ATPase, C-terminus
76961056756Cation transporter/ATPase, N-terminus
2211222214dUTPase
4555544436Aconitase C-terminal domain
3333433325Amino acid kinase family
111121119N-(5'phosphoribosyl)anthranilate (PRA) isomerase
111121119Acyl transferase domain
111111118Urease beta subunit
2463212222Dihydrodipicolinate synthetase family
2526262035192226199haloacid dehalogenase-like hydrolase
36612321Glycosyl hydrolases family 2
2334433224Glycosyl hydrolases family 18
111111118Proliferating cell nuclear antigen, N-terminal domain
11111117Acylphosphatase
111121119Adenylosuccinate synthetase
1113411113Asparaginase, N-terminal
3233433324Peptidase S24-like
1111411111Inorganic pyrophosphatase
2154621223Glycosyl hydrolases family 16
2221322216Glycosyl hydrolases family 15
3563735335NADH:flavin oxidoreductase / NADH oxidase family
62223246273-hydroxyacyl-CoA dehydrogenase, C-terminal domain
211313213Glycosyl hydrolase family 20, catalytic domain
3344533328HhH-GPD superfamily base excision DNA repair protein
111121119AIR carboxylase
6273625637GMC oxidoreductase
2223522220Asparagine synthase
4544844437Septin
111111118EF-1 guanine nucleotide exchange domain
111121119Homoserine dehydrogenase
221535220Flavin-binding monooxygenase-like
4333333426tRNA synthetases class I (E and Q), catalytic domain
111111118tRNA synthetases class I (R)
5646964646XPG N-terminal domain
978612711969Metallo-beta-lactamase superfamily
11F5/8 type C domain
3332334324Choline/Carnitine o-acyltransferase
111121119Putative esterase
111121119Glycosyl hydrolase family 9
111121119Ferrochelatase
3222332320Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111121119Arginosuccinate synthase
111111118Electron transfer flavoprotein FAD-binding domain
3333433325RNB domain
3723419Dioxygenase
3332432323CNH domain
2211422216Diacylglycerol kinase catalytic domain
66541266651Dual specificity phosphatase, catalytic domain
11111117MyTH4 domain